C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R12E2.12

Gene ID Gene Name Reads Transcripts Annotation
R12E2.12 mrps-6 4708 R12E2.12 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]

Genes with expression patterns similar to R12E2.12

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R12E2.12 mrps-6 4708 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]
2. D2023.5 mpst-1 10328 7.659 0.946 0.934 0.956 0.934 0.972 0.981 0.980 0.956 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
3. Y37E3.9 phb-1 29211 7.655 0.966 0.946 0.965 0.946 0.972 0.955 0.961 0.944 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
4. C05D11.10 mrps-17 4613 7.654 0.963 0.950 0.939 0.950 0.951 0.972 0.962 0.967 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
5. F59A2.3 cri-3 15077 7.639 0.965 0.948 0.921 0.948 0.970 0.965 0.982 0.940 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
6. Y92H12BR.8 mrpl-15 6344 7.619 0.965 0.949 0.941 0.949 0.952 0.961 0.952 0.950 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
7. K08F4.2 gtbp-1 25222 7.614 0.948 0.944 0.953 0.944 0.962 0.931 0.978 0.954 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
8. T28D9.10 snr-3 9995 7.613 0.957 0.942 0.929 0.942 0.972 0.956 0.968 0.947 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
9. T23B12.3 mrps-2 5434 7.613 0.938 0.962 0.931 0.962 0.970 0.945 0.954 0.951 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
10. B0303.15 mrpl-11 9889 7.604 0.945 0.912 0.956 0.912 0.973 0.982 0.971 0.953 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
11. T21B10.1 mrpl-50 14595 7.602 0.944 0.949 0.942 0.949 0.970 0.962 0.959 0.927 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
12. Y49E10.15 snr-6 8505 7.599 0.943 0.939 0.900 0.939 0.970 0.973 0.976 0.959 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
13. T01E8.6 mrps-14 9328 7.589 0.954 0.928 0.951 0.928 0.976 0.970 0.942 0.940 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
14. T03D8.2 mrps-12 8253 7.586 0.938 0.957 0.943 0.957 0.937 0.950 0.966 0.938 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
15. F13G3.11 mrpl-13 6024 7.584 0.946 0.941 0.920 0.941 0.963 0.986 0.958 0.929 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
16. C06A1.5 rpb-6 7515 7.582 0.926 0.936 0.942 0.936 0.964 0.959 0.955 0.964 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
17. C34E10.11 mrps-26 4649 7.582 0.963 0.947 0.966 0.947 0.907 0.952 0.968 0.932 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
18. F22B5.9 fars-3 7209 7.575 0.942 0.958 0.944 0.958 0.949 0.962 0.948 0.914 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
19. T24H7.1 phb-2 28775 7.575 0.954 0.935 0.926 0.935 0.946 0.975 0.968 0.936 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
20. Y40G12A.1 ubh-3 4142 7.573 0.942 0.920 0.937 0.920 0.955 0.976 0.951 0.972 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
21. B0205.11 mrpl-9 9162 7.571 0.959 0.931 0.945 0.931 0.973 0.949 0.957 0.926 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
22. F55H2.6 clu-1 21404 7.571 0.903 0.968 0.954 0.968 0.951 0.941 0.947 0.939 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
23. W06H3.3 ctps-1 8363 7.568 0.957 0.912 0.945 0.912 0.969 0.956 0.959 0.958 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
24. Y73B6BL.32 lsm-8 11002 7.567 0.958 0.941 0.926 0.941 0.953 0.967 0.968 0.913 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
25. F43C1.6 mrpl-21 2778 7.563 0.961 0.918 0.949 0.918 0.978 0.975 0.949 0.915 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
26. Y50D7A.9 taco-1 5949 7.562 0.919 0.950 0.921 0.950 0.973 0.947 0.954 0.948 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
27. ZK652.1 snr-5 5993 7.562 0.962 0.938 0.915 0.938 0.935 0.966 0.960 0.948 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
28. F26F4.11 rpb-8 7601 7.556 0.951 0.905 0.947 0.905 0.971 0.979 0.953 0.945 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
29. T02G5.9 kars-1 9763 7.555 0.929 0.949 0.953 0.949 0.952 0.936 0.956 0.931 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
30. D2013.7 eif-3.F 21004 7.553 0.972 0.950 0.968 0.950 0.934 0.934 0.904 0.941 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
31. F25H5.6 mrpl-54 2630 7.549 0.948 0.910 0.946 0.910 0.974 0.978 0.943 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492455]
32. Y18D10A.25 fkb-8 8968 7.548 0.971 0.945 0.915 0.945 0.972 0.915 0.943 0.942 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
33. T21B10.7 cct-2 13999 7.546 0.935 0.941 0.923 0.941 0.959 0.957 0.950 0.940 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
34. W04B5.4 mrpl-30 4938 7.542 0.944 0.926 0.943 0.926 0.968 0.984 0.936 0.915 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
35. F01F1.8 cct-6 29460 7.541 0.939 0.938 0.957 0.938 0.932 0.959 0.953 0.925 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
36. F58E10.3 ddx-17 15107 7.54 0.902 0.948 0.931 0.948 0.944 0.968 0.959 0.940 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
37. ZC410.2 mppb-1 3991 7.539 0.901 0.928 0.915 0.928 0.974 0.969 0.971 0.953 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
38. C14A4.14 mrps-22 7966 7.538 0.955 0.933 0.947 0.933 0.958 0.956 0.908 0.948 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
39. C47B2.9 C47B2.9 4096 7.538 0.964 0.900 0.941 0.900 0.967 0.970 0.981 0.915
40. Y71F9B.4 snr-7 13542 7.536 0.977 0.910 0.898 0.910 0.958 0.962 0.949 0.972 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
41. Y49A3A.5 cyn-1 6411 7.535 0.974 0.897 0.931 0.897 0.975 0.963 0.942 0.956 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
42. C52E4.3 snr-4 19308 7.532 0.957 0.950 0.927 0.950 0.963 0.944 0.911 0.930 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
43. C08F8.1 pfd-1 10199 7.529 0.933 0.937 0.920 0.937 0.955 0.974 0.945 0.928 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
44. Y77E11A.6 rpc-11 2203 7.529 0.955 0.933 0.948 0.933 0.939 0.951 0.953 0.917 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
45. W08E3.1 snr-2 14849 7.524 0.915 0.913 0.931 0.913 0.945 0.970 0.982 0.955 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
46. Y37D8A.18 mrps-10 4551 7.524 0.946 0.943 0.937 0.943 0.984 0.951 0.959 0.861 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
47. C15H11.9 rrbs-1 9177 7.523 0.907 0.944 0.937 0.944 0.931 0.952 0.941 0.967 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
48. C34E10.2 gop-2 5684 7.521 0.909 0.934 0.929 0.934 0.950 0.952 0.976 0.937 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
49. Y54E10A.7 mrpl-17 2791 7.52 0.926 0.903 0.929 0.903 0.973 0.955 0.984 0.947 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]
50. T11G6.1 hars-1 7908 7.519 0.937 0.968 0.959 0.968 0.942 0.942 0.903 0.900 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
51. F56D1.3 mrps-16 2309 7.515 0.967 0.947 0.923 0.947 0.943 0.954 0.925 0.909 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
52. B0261.4 mrpl-47 8210 7.513 0.959 0.909 0.928 0.909 0.972 0.942 0.928 0.966 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
53. F10G7.1 tag-151 9031 7.511 0.904 0.962 0.950 0.962 0.948 0.924 0.950 0.911 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
54. F58B3.5 mars-1 6729 7.511 0.941 0.943 0.966 0.943 0.954 0.945 0.945 0.874 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
55. C25A1.13 mrpl-34 3170 7.507 0.937 0.876 0.938 0.876 0.976 0.965 0.971 0.968 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
56. Y116A8C.42 snr-1 17062 7.507 0.962 0.927 0.913 0.927 0.954 0.934 0.972 0.918 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
57. C14A4.5 crn-5 1759 7.504 0.913 0.926 0.941 0.926 0.918 0.950 0.968 0.962 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
58. W08E3.3 ola-1 20885 7.504 0.945 0.942 0.938 0.942 0.962 0.936 0.937 0.902 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
59. T06D8.5 cox-15 3892 7.504 0.905 0.920 0.956 0.920 0.966 0.922 0.969 0.946 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
60. C03D6.8 rpl-24.2 5932 7.503 0.933 0.926 0.897 0.926 0.943 0.938 0.972 0.968 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
61. T12G3.5 mrpl-51 5192 7.503 0.941 0.901 0.914 0.901 0.930 0.984 0.980 0.952 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
62. K07A12.7 mrps-15 6325 7.502 0.964 0.933 0.953 0.933 0.947 0.897 0.927 0.948 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
63. K08F11.3 cif-1 10218 7.5 0.940 0.956 0.941 0.956 0.939 0.907 0.894 0.967 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
64. T07D4.4 ddx-19 7234 7.499 0.915 0.918 0.954 0.918 0.958 0.976 0.944 0.916 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
65. Y54E5A.6 Y54E5A.6 770 7.497 0.945 0.920 0.912 0.920 0.950 0.959 0.931 0.960
66. D2096.8 nap-1 59459 7.496 0.925 0.949 0.936 0.949 0.934 0.888 0.954 0.961 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
67. C01F1.2 sco-1 3010 7.494 0.963 0.935 0.960 0.935 0.955 0.948 0.883 0.915 SCO (yeast Suppressor of Cytochrome Oxidase deficiency) homolog [Source:RefSeq peptide;Acc:NP_494755]
68. T10B5.5 cct-7 24616 7.493 0.906 0.960 0.902 0.960 0.949 0.926 0.948 0.942 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
69. F54A3.3 cct-3 25183 7.493 0.944 0.941 0.939 0.941 0.939 0.930 0.952 0.907 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
70. C01A2.3 oxa-1 2783 7.491 0.953 0.937 0.901 0.937 0.966 0.977 0.954 0.866 OXA mitochondrial inner membrane insertase homolog [Source:RefSeq peptide;Acc:NP_493356]
71. T08B2.9 fars-1 12650 7.489 0.960 0.942 0.940 0.942 0.958 0.934 0.919 0.894 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
72. Y23H5B.6 Y23H5B.6 5886 7.486 0.915 0.960 0.891 0.960 0.931 0.940 0.936 0.953
73. F28H1.3 aars-2 13537 7.484 0.910 0.932 0.935 0.932 0.963 0.953 0.945 0.914 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
74. F21C3.4 rde-2 6286 7.483 0.951 0.908 0.927 0.908 0.936 0.957 0.937 0.959
75. F13G3.4 dylt-1 21345 7.483 0.963 0.938 0.946 0.938 0.956 0.912 0.899 0.931 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
76. C49H3.10 xpo-3 9101 7.481 0.875 0.952 0.923 0.952 0.913 0.971 0.953 0.942 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
77. Y54H5A.2 Y54H5A.2 2168 7.48 0.925 0.899 0.937 0.899 0.930 0.958 0.969 0.963
78. C25A1.10 dao-5 18351 7.474 0.874 0.949 0.928 0.949 0.918 0.923 0.969 0.964 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
79. R13A5.12 lpd-7 10476 7.474 0.938 0.919 0.892 0.919 0.943 0.953 0.952 0.958 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
80. T13H5.5 mrps-18B 3430 7.472 0.928 0.921 0.927 0.921 0.951 0.965 0.931 0.928 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
81. Y71H2AM.23 tufm-1 16206 7.472 0.877 0.951 0.952 0.951 0.951 0.926 0.900 0.964 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_497623]
82. B0432.3 mrpl-41 5514 7.472 0.939 0.885 0.943 0.885 0.943 0.983 0.957 0.937 39S ribosomal protein L41, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90993]
83. H20J04.5 pfd-2 8082 7.47 0.946 0.902 0.958 0.902 0.967 0.924 0.935 0.936 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
84. Y48B6A.3 xrn-2 4881 7.47 0.946 0.935 0.913 0.935 0.891 0.941 0.943 0.966 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
85. F56F3.1 ifet-1 25772 7.47 0.929 0.915 0.907 0.915 0.956 0.963 0.944 0.941 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
86. ZK652.9 coq-5 5143 7.469 0.933 0.943 0.907 0.943 0.969 0.965 0.902 0.907 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34666]
87. ZK863.6 dpy-30 16177 7.469 0.910 0.906 0.945 0.906 0.978 0.932 0.975 0.917 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
88. T23G11.3 gld-1 41748 7.464 0.950 0.941 0.902 0.941 0.893 0.948 0.955 0.934 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
89. C18E9.6 tomm-40 13426 7.462 0.955 0.936 0.949 0.936 0.920 0.948 0.905 0.913 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
90. F54B3.3 atad-3 9583 7.46 0.945 0.902 0.924 0.902 0.951 0.968 0.924 0.944 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
91. F29C12.4 gfm-1 8964 7.46 0.891 0.936 0.939 0.936 0.975 0.979 0.872 0.932 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
92. Y53C12B.2 Y53C12B.2 6115 7.46 0.952 0.905 0.954 0.905 0.899 0.967 0.942 0.936 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
93. F15D3.7 timm-23 14902 7.46 0.959 0.946 0.907 0.946 0.892 0.939 0.901 0.970 Translocase, Inner Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_492953]
94. F29C4.6 tut-1 5637 7.46 0.946 0.955 0.925 0.955 0.961 0.958 0.869 0.891 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
95. F58D5.1 hrp-2 17211 7.459 0.903 0.940 0.961 0.940 0.963 0.907 0.929 0.916 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
96. Y57G11C.34 mrps-7 3450 7.458 0.954 0.927 0.930 0.927 0.969 0.975 0.902 0.874 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
97. Y57G11C.16 rps-18 76576 7.457 0.952 0.945 0.921 0.945 0.936 0.904 0.956 0.898 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
98. Y62E10A.11 mdt-9 5971 7.456 0.949 0.905 0.916 0.905 0.957 0.970 0.950 0.904 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
99. F25H5.4 eef-2 34846 7.455 0.935 0.949 0.922 0.949 0.929 0.874 0.939 0.958 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
100. C34E10.5 prmt-5 12277 7.449 0.919 0.954 0.935 0.954 0.941 0.936 0.881 0.929 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]

There are 1034 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA