C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R53.2

Gene ID Gene Name Reads Transcripts Annotation
R53.2 dtmk-1 6821 R53.2 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]

Genes with expression patterns similar to R53.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R53.2 dtmk-1 6821 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
2. K01G5.4 ran-1 32379 7.733 0.971 0.982 0.971 0.982 0.990 0.962 0.939 0.936 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
3. D2030.8 D2030.8 2645 7.723 0.935 0.973 0.962 0.973 0.983 0.984 0.948 0.965
4. F32H2.1 snpc-4 7581 7.72 0.954 0.987 0.953 0.987 0.984 0.971 0.951 0.933 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
5. T23H2.1 npp-12 12425 7.718 0.946 0.970 0.970 0.970 0.976 0.985 0.959 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
6. R12C12.2 ran-5 14517 7.699 0.949 0.969 0.979 0.969 0.976 0.965 0.949 0.943 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
7. F52C9.7 mog-3 9880 7.694 0.959 0.982 0.971 0.982 0.966 0.964 0.959 0.911 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
8. C08B11.5 sap-49 10553 7.693 0.941 0.975 0.963 0.975 0.972 0.959 0.940 0.968 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
9. Y41D4B.19 npp-8 12992 7.691 0.949 0.975 0.978 0.975 0.951 0.988 0.925 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
10. T05H4.14 gad-1 7979 7.691 0.963 0.961 0.943 0.961 0.984 0.980 0.948 0.951 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
11. Y56A3A.17 npp-16 5391 7.688 0.969 0.963 0.951 0.963 0.962 0.956 0.982 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
12. Y17G7A.1 hmg-12 29989 7.686 0.937 0.972 0.978 0.972 0.970 0.965 0.953 0.939 HMG [Source:RefSeq peptide;Acc:NP_496544]
13. T28D9.2 rsp-5 6460 7.686 0.955 0.967 0.948 0.967 0.965 0.984 0.941 0.959 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
14. ZK328.2 eftu-2 7040 7.68 0.900 0.978 0.969 0.978 0.995 0.937 0.959 0.964 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
15. F10E9.7 F10E9.7 1842 7.68 0.968 0.937 0.976 0.937 0.977 0.970 0.953 0.962
16. F23F1.1 nfyc-1 9983 7.68 0.949 0.984 0.974 0.984 0.970 0.967 0.929 0.923 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
17. Y113G7B.5 fog-2 2753 7.679 0.972 0.965 0.941 0.965 0.985 0.965 0.917 0.969 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
18. F32A5.7 lsm-4 3785 7.677 0.976 0.977 0.960 0.977 0.977 0.975 0.916 0.919 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
19. K02F3.11 rnp-5 6205 7.677 0.966 0.975 0.970 0.975 0.941 0.977 0.939 0.934 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
20. C34E10.2 gop-2 5684 7.676 0.961 0.980 0.968 0.980 0.975 0.971 0.890 0.951 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
21. F59A2.1 npp-9 34375 7.671 0.957 0.963 0.967 0.963 0.974 0.995 0.900 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
22. W02B12.3 rsp-1 9235 7.669 0.954 0.973 0.977 0.973 0.984 0.970 0.921 0.917 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
23. K08E7.1 eak-7 18960 7.668 0.960 0.978 0.957 0.978 0.975 0.945 0.937 0.938 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
24. C06A1.5 rpb-6 7515 7.668 0.952 0.958 0.977 0.958 0.978 0.975 0.927 0.943 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
25. C05C8.5 C05C8.5 2655 7.665 0.934 0.954 0.953 0.954 0.973 0.982 0.953 0.962
26. Y116A8C.42 snr-1 17062 7.664 0.907 0.980 0.975 0.980 0.975 0.972 0.917 0.958 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
27. C33H5.12 rsp-6 23342 7.66 0.969 0.970 0.965 0.970 0.980 0.949 0.959 0.898 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
28. F58E10.3 ddx-17 15107 7.659 0.962 0.968 0.966 0.968 0.987 0.968 0.908 0.932 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
29. W06E11.4 sbds-1 6701 7.659 0.936 0.967 0.985 0.967 0.954 0.986 0.939 0.925 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
30. ZK742.1 xpo-1 20741 7.659 0.943 0.970 0.976 0.970 0.979 0.955 0.928 0.938 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
31. F28H1.3 aars-2 13537 7.658 0.940 0.974 0.964 0.974 0.991 0.960 0.916 0.939 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
32. T01E8.6 mrps-14 9328 7.657 0.921 0.975 0.958 0.975 0.969 0.980 0.939 0.940 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
33. C25A1.4 C25A1.4 15507 7.657 0.944 0.980 0.957 0.980 0.975 0.974 0.927 0.920
34. B0035.3 B0035.3 4118 7.657 0.967 0.968 0.965 0.968 0.974 0.945 0.950 0.920
35. F43G9.9 cpn-1 14505 7.656 0.957 0.968 0.972 0.968 0.975 0.959 0.945 0.912 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
36. C27B7.1 spr-2 14958 7.655 0.952 0.973 0.959 0.973 0.983 0.961 0.932 0.922 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
37. Y37E3.3 rpb-10 4051 7.654 0.935 0.956 0.935 0.956 0.986 0.979 0.918 0.989 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
38. Y71G12B.9 lin-65 7476 7.654 0.919 0.976 0.981 0.976 0.967 0.983 0.893 0.959 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
39. Y37D8A.9 mrg-1 14369 7.653 0.959 0.976 0.943 0.976 0.970 0.986 0.889 0.954 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
40. F56D2.6 ddx-15 12282 7.653 0.904 0.972 0.965 0.972 0.979 0.963 0.939 0.959 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
41. Y65B4BL.2 deps-1 18277 7.65 0.933 0.983 0.975 0.983 0.977 0.947 0.935 0.917
42. F18C5.2 wrn-1 3792 7.65 0.884 0.982 0.961 0.982 0.984 0.942 0.934 0.981 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
43. F53F10.5 npp-11 3378 7.65 0.936 0.977 0.948 0.977 0.983 0.990 0.885 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
44. Y37E3.15 npp-13 7250 7.649 0.961 0.963 0.981 0.963 0.977 0.952 0.930 0.922 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
45. C26D10.1 ran-3 11111 7.647 0.943 0.971 0.973 0.971 0.956 0.984 0.886 0.963 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
46. Y62E10A.11 mdt-9 5971 7.647 0.912 0.977 0.971 0.977 0.958 0.975 0.933 0.944 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
47. F33D4.5 mrpl-1 5337 7.646 0.917 0.970 0.952 0.970 0.968 0.969 0.953 0.947 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
48. T26A8.1 T26A8.1 4387 7.646 0.937 0.965 0.956 0.965 0.938 0.977 0.969 0.939
49. B0464.7 baf-1 10161 7.645 0.936 0.969 0.952 0.969 0.978 0.945 0.954 0.942 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
50. EEED8.1 tofu-6 3962 7.644 0.954 0.955 0.957 0.955 0.991 0.967 0.926 0.939 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
51. F53F4.3 tbcb-1 6442 7.643 0.965 0.964 0.964 0.964 0.961 0.927 0.950 0.948 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
52. Y23H5B.6 Y23H5B.6 5886 7.642 0.929 0.961 0.970 0.961 0.970 0.967 0.933 0.951
53. Y53C12B.3 nos-3 20231 7.641 0.904 0.977 0.969 0.977 0.964 0.951 0.936 0.963 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
54. Y56A3A.29 ung-1 1900 7.64 0.927 0.955 0.944 0.955 0.990 0.978 0.944 0.947 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
55. F33E11.2 F33E11.2 5350 7.639 0.924 0.953 0.948 0.953 0.986 0.967 0.956 0.952
56. F22D6.3 nars-1 18624 7.638 0.951 0.976 0.978 0.976 0.963 0.968 0.916 0.910 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
57. F32H2.4 thoc-3 3861 7.638 0.948 0.965 0.973 0.965 0.953 0.960 0.927 0.947 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
58. R06F6.1 cdl-1 14167 7.637 0.926 0.978 0.929 0.978 0.962 0.985 0.893 0.986 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
59. F58F6.4 rfc-2 2074 7.634 0.955 0.954 0.946 0.954 0.983 0.954 0.920 0.968 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
60. Y18D10A.16 Y18D10A.16 2881 7.633 0.935 0.944 0.945 0.944 0.959 0.985 0.943 0.978
61. F32E10.6 cec-5 10643 7.633 0.964 0.970 0.956 0.970 0.965 0.960 0.943 0.905 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
62. T22C1.3 T22C1.3 2305 7.631 0.938 0.960 0.981 0.960 0.957 0.961 0.917 0.957
63. F56C9.6 F56C9.6 4303 7.631 0.951 0.959 0.956 0.959 0.974 0.965 0.945 0.922
64. Y54E5A.4 npp-4 6288 7.625 0.930 0.977 0.964 0.977 0.980 0.948 0.918 0.931 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
65. T23B5.1 prmt-3 10677 7.623 0.962 0.969 0.970 0.969 0.990 0.898 0.957 0.908 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
66. F56B3.8 mrpl-2 3195 7.623 0.928 0.940 0.943 0.940 0.979 0.974 0.955 0.964 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
67. F26B1.3 ima-2 18826 7.62 0.952 0.973 0.950 0.973 0.962 0.967 0.869 0.974 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
68. K02F2.4 ulp-5 3433 7.619 0.894 0.967 0.948 0.967 0.977 0.954 0.945 0.967 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
69. F59E12.11 sam-4 8179 7.619 0.930 0.960 0.979 0.960 0.975 0.962 0.909 0.944
70. C27H5.3 fust-1 6978 7.618 0.922 0.956 0.968 0.956 0.976 0.977 0.941 0.922 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
71. Y47D3A.26 smc-3 6256 7.617 0.923 0.980 0.971 0.980 0.943 0.966 0.883 0.971 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
72. Y38A8.3 ulp-2 7403 7.616 0.925 0.973 0.977 0.973 0.973 0.978 0.934 0.883 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
73. R07E5.14 rnp-4 11659 7.616 0.968 0.964 0.968 0.964 0.968 0.976 0.869 0.939 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
74. W06H3.3 ctps-1 8363 7.616 0.915 0.961 0.956 0.961 0.968 0.990 0.909 0.956 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
75. F26F4.11 rpb-8 7601 7.615 0.924 0.963 0.969 0.963 0.967 0.988 0.884 0.957 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
76. C26E6.4 rpb-2 7053 7.615 0.907 0.972 0.975 0.972 0.983 0.971 0.917 0.918 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
77. ZK1058.4 ccdc-47 8879 7.612 0.952 0.963 0.957 0.963 0.967 0.961 0.926 0.923 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
78. C46A5.9 hcf-1 6295 7.61 0.933 0.958 0.941 0.958 0.980 0.979 0.946 0.915 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
79. C16C10.4 C16C10.4 3439 7.609 0.892 0.964 0.939 0.964 0.978 0.984 0.924 0.964 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
80. Y41D4B.13 ced-2 10100 7.609 0.950 0.972 0.947 0.972 0.960 0.959 0.899 0.950 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
81. B0414.3 hil-5 10816 7.609 0.955 0.972 0.983 0.972 0.987 0.944 0.866 0.930 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
82. F59E10.1 orc-2 4698 7.608 0.946 0.978 0.942 0.978 0.942 0.955 0.958 0.909 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
83. C14A4.14 mrps-22 7966 7.607 0.830 0.971 0.944 0.971 0.982 0.989 0.942 0.978 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
84. F42A6.7 hrp-1 28201 7.607 0.955 0.969 0.973 0.969 0.971 0.920 0.943 0.907 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
85. W01G7.3 rpb-11 7826 7.606 0.962 0.961 0.964 0.961 0.973 0.964 0.939 0.882 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
86. C25D7.8 otub-1 7941 7.605 0.945 0.967 0.980 0.967 0.981 0.898 0.940 0.927 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
87. F28B3.8 imb-1 7515 7.604 0.932 0.978 0.971 0.978 0.975 0.934 0.913 0.923 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
88. T10F2.4 prp-19 11298 7.604 0.934 0.976 0.988 0.976 0.964 0.899 0.926 0.941 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
89. C48B4.11 C48B4.11 4384 7.604 0.912 0.981 0.958 0.981 0.981 0.943 0.939 0.909
90. C08B11.2 hda-2 2313 7.601 0.935 0.961 0.940 0.961 0.973 0.958 0.936 0.937 Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
91. CC4.3 smu-1 4169 7.6 0.965 0.970 0.938 0.970 0.945 0.971 0.905 0.936 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
92. F32D1.10 mcm-7 21233 7.6 0.931 0.964 0.908 0.964 0.994 0.971 0.915 0.953 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
93. Y54E5A.6 Y54E5A.6 770 7.599 0.889 0.949 0.969 0.949 0.975 0.988 0.922 0.958
94. R09B3.5 mag-1 7496 7.598 0.958 0.958 0.961 0.958 0.959 0.962 0.926 0.916 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
95. T04A8.11 mrpl-16 5998 7.598 0.909 0.951 0.941 0.951 0.987 0.970 0.944 0.945 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
96. K07A12.2 egg-6 18331 7.597 0.905 0.977 0.902 0.977 0.989 0.969 0.955 0.923 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
97. F33H2.5 pole-1 3734 7.597 0.942 0.969 0.919 0.969 0.992 0.982 0.903 0.921 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
98. F30F8.3 gras-1 5902 7.597 0.937 0.969 0.907 0.969 0.960 0.974 0.940 0.941 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
99. C18G1.5 hil-4 21692 7.596 0.946 0.973 0.956 0.973 0.978 0.912 0.942 0.916 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
100. K06A5.7 cdc-25.1 14961 7.596 0.923 0.944 0.944 0.944 0.985 0.952 0.968 0.936 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]

There are 3069 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA