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Results for Y39B6A.39

Gene ID Gene Name Reads Transcripts Annotation
Y39B6A.39 mrps-35 1211 Y39B6A.39a, Y39B6A.39b Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_001256838]

Genes with expression patterns similar to Y39B6A.39

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y39B6A.39 mrps-35 1211 7 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_001256838]
2. F58E10.3 ddx-17 15107 6.431 0.901 0.916 0.901 0.916 - 0.956 0.889 0.952 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
3. R07E5.14 rnp-4 11659 6.43 0.888 0.909 0.900 0.909 - 0.960 0.914 0.950 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
4. ZK863.6 dpy-30 16177 6.408 0.874 0.894 0.909 0.894 - 0.924 0.924 0.989 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
5. ZK550.4 ZK550.4 5815 6.408 0.861 0.885 0.918 0.885 - 0.943 0.937 0.979 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
6. F01F1.8 cct-6 29460 6.407 0.908 0.887 0.935 0.887 - 0.936 0.902 0.952 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
7. ZK1098.5 trpp-3 3389 6.407 0.884 0.895 0.902 0.895 - 0.959 0.910 0.962 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
8. Y116A8C.42 snr-1 17062 6.399 0.901 0.892 0.915 0.892 - 0.927 0.909 0.963 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
9. K07A1.12 lin-53 15817 6.389 0.874 0.891 0.892 0.891 - 0.961 0.920 0.960 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
10. T10B5.5 cct-7 24616 6.387 0.898 0.890 0.891 0.890 - 0.919 0.933 0.966 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
11. Y49A3A.5 cyn-1 6411 6.386 0.876 0.914 0.867 0.914 - 0.952 0.926 0.937 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
12. T25G3.4 T25G3.4 9394 6.376 0.922 0.896 0.927 0.896 - 0.952 0.890 0.893 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
13. W06E11.4 sbds-1 6701 6.372 0.892 0.885 0.909 0.885 - 0.950 0.932 0.919 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
14. T05H4.14 gad-1 7979 6.371 0.869 0.916 0.898 0.916 - 0.925 0.893 0.954 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
15. W03B1.4 sars-2 2356 6.361 0.885 0.923 0.876 0.923 - 0.965 0.833 0.956 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
16. T08B2.9 fars-1 12650 6.361 0.943 0.896 0.896 0.896 - 0.890 0.860 0.980 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
17. F21C3.4 rde-2 6286 6.358 0.899 0.894 0.916 0.894 - 0.936 0.865 0.954
18. T05H4.6 erfa-1 12542 6.356 0.896 0.922 0.910 0.922 - 0.907 0.849 0.950 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
19. Y71F9B.4 snr-7 13542 6.35 0.912 0.881 0.859 0.881 - 0.953 0.933 0.931 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
20. K01G5.1 rnf-113 4336 6.349 0.916 0.880 0.911 0.880 - 0.910 0.892 0.960 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
21. W08E3.3 ola-1 20885 6.349 0.921 0.880 0.874 0.880 - 0.920 0.894 0.980 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
22. F43G9.5 cfim-1 9169 6.347 0.872 0.873 0.892 0.873 - 0.969 0.924 0.944 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
23. F28H1.3 aars-2 13537 6.343 0.913 0.858 0.906 0.858 - 0.935 0.913 0.960 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
24. Y55F3AR.3 cct-8 17979 6.342 0.886 0.857 0.911 0.857 - 0.939 0.919 0.973 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
25. C47E12.1 sars-1 4942 6.342 0.856 0.899 0.884 0.899 - 0.912 0.938 0.954 Probable serine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q18678]
26. F33D4.5 mrpl-1 5337 6.335 0.924 0.901 0.926 0.901 - 0.934 0.794 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
27. C09G5.2 dph-2 2159 6.335 0.858 0.922 0.848 0.922 - 0.951 0.882 0.952 Diphthamide biosynthesis protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09454]
28. F53G2.7 mnat-1 10966 6.332 0.871 0.889 0.892 0.889 - 0.907 0.934 0.950 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
29. Y116A8C.34 cyn-13 2972 6.332 0.873 0.893 0.886 0.893 - 0.958 0.866 0.963 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
30. T19C3.8 fem-2 9225 6.331 0.880 0.875 0.885 0.875 - 0.955 0.890 0.971 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
31. H21P03.1 mbf-1 25586 6.329 0.896 0.878 0.895 0.878 - 0.896 0.904 0.982 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
32. W08E3.1 snr-2 14849 6.327 0.902 0.867 0.908 0.867 - 0.955 0.907 0.921 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
33. C33H5.12 rsp-6 23342 6.327 0.883 0.907 0.909 0.907 - 0.915 0.847 0.959 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
34. F22B5.9 fars-3 7209 6.324 0.908 0.875 0.890 0.875 - 0.924 0.882 0.970 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
35. R74.8 R74.8 7722 6.324 0.838 0.891 0.905 0.891 - 0.951 0.917 0.931
36. T04A8.11 mrpl-16 5998 6.323 0.885 0.884 0.928 0.884 - 0.908 0.884 0.950 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
37. F33D4.7 emc-6 6534 6.321 0.867 0.899 0.923 0.899 - 0.915 0.838 0.980 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
38. K08D10.4 rnp-2 2338 6.32 0.839 0.897 0.895 0.897 - 0.955 0.897 0.940 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500504]
39. M88.7 cisd-3.1 5713 6.32 0.875 0.857 0.900 0.857 - 0.913 0.936 0.982 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
40. F39B2.1 hinf-1 10002 6.317 0.833 0.915 0.887 0.915 - 0.960 0.855 0.952 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
41. F43C1.6 mrpl-21 2778 6.317 0.865 0.880 0.850 0.880 - 0.965 0.946 0.931 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
42. T11G6.1 hars-1 7908 6.316 0.896 0.901 0.903 0.901 - 0.924 0.838 0.953 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
43. B0205.9 B0205.9 3651 6.316 0.884 0.896 0.861 0.896 - 0.956 0.883 0.940
44. C52E4.6 cyl-1 6405 6.314 0.907 0.885 0.939 0.885 - 0.888 0.830 0.980 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
45. Y54E10BR.6 rpb-7 2942 6.309 0.850 0.852 0.917 0.852 - 0.965 0.906 0.967 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_491093]
46. Y62E10A.11 mdt-9 5971 6.308 0.893 0.870 0.898 0.870 - 0.962 0.874 0.941 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
47. R07E5.11 R07E5.11 1170 6.306 0.850 0.952 0.894 0.952 - 0.836 0.864 0.958
48. C26E6.7 eri-9 8069 6.306 0.879 0.870 0.923 0.870 - 0.952 0.888 0.924 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
49. B0393.2 rbg-3 6701 6.301 0.818 0.940 0.866 0.940 - 0.903 0.959 0.875 RaB GAP related [Source:RefSeq peptide;Acc:NP_497979]
50. T12G3.5 mrpl-51 5192 6.295 0.875 0.888 0.904 0.888 - 0.956 0.845 0.939 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
51. F26F4.11 rpb-8 7601 6.295 0.881 0.851 0.892 0.851 - 0.972 0.934 0.914 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
52. C14A4.5 crn-5 1759 6.289 0.875 0.884 0.877 0.884 - 0.933 0.885 0.951 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
53. ZC410.2 mppb-1 3991 6.288 0.895 0.878 0.883 0.878 - 0.962 0.869 0.923 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
54. Y38A8.3 ulp-2 7403 6.285 0.909 0.892 0.901 0.892 - 0.923 0.804 0.964 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
55. T23H2.1 npp-12 12425 6.28 0.884 0.867 0.895 0.867 - 0.947 0.860 0.960 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
56. K08E7.1 eak-7 18960 6.28 0.841 0.882 0.885 0.882 - 0.949 0.875 0.966 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
57. B0464.7 baf-1 10161 6.279 0.885 0.876 0.876 0.876 - 0.917 0.898 0.951 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
58. ZK742.1 xpo-1 20741 6.277 0.857 0.868 0.905 0.868 - 0.944 0.880 0.955 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
59. ZK652.9 coq-5 5143 6.277 0.904 0.896 0.878 0.896 - 0.941 0.808 0.954 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34666]
60. K03B4.2 K03B4.2 21796 6.276 0.899 0.884 0.941 0.884 - 0.877 0.837 0.954
61. C08F8.1 pfd-1 10199 6.273 0.893 0.859 0.869 0.859 - 0.955 0.878 0.960 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
62. F22D6.3 nars-1 18624 6.272 0.899 0.917 0.889 0.917 - 0.920 0.772 0.958 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
63. C43E11.4 tufm-2 3038 6.27 0.904 0.894 0.871 0.894 - 0.959 0.914 0.834 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_491338]
64. R12C12.2 ran-5 14517 6.269 0.898 0.872 0.905 0.872 - 0.918 0.846 0.958 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
65. F33D4.8 mrps-24 2853 6.268 0.879 0.855 0.894 0.855 - 0.944 0.858 0.983 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
66. W03F8.4 W03F8.4 20285 6.265 0.926 0.878 0.868 0.878 - 0.877 0.885 0.953
67. H17B01.4 emc-1 9037 6.264 0.867 0.884 0.891 0.884 - 0.917 0.858 0.963 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
68. Y59A8B.12 Y59A8B.12 2566 6.261 0.806 0.861 0.929 0.861 - 0.919 0.912 0.973
69. Y46H3A.7 mrpl-39 2286 6.259 0.891 0.841 0.886 0.841 - 0.958 0.907 0.935 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001024247]
70. Y73B6BL.32 lsm-8 11002 6.258 0.869 0.875 0.921 0.875 - 0.960 0.832 0.926 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
71. D2007.4 mrpl-18 2880 6.257 0.884 0.871 0.830 0.871 - 0.923 0.909 0.969 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
72. Y54G11A.11 Y54G11A.11 14933 6.257 0.863 0.884 0.908 0.884 - 0.934 0.814 0.970 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
73. Y34D9A.1 mrpl-38 5291 6.256 0.899 0.887 0.925 0.887 - 0.898 0.803 0.957 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
74. M18.5 ddb-1 3823 6.254 0.866 0.877 0.828 0.877 - 0.957 0.914 0.935 DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
75. R74.1 lars-1 8467 6.254 0.930 0.853 0.881 0.853 - 0.898 0.876 0.963 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
76. C15H11.4 dhs-22 21674 6.252 0.867 0.899 0.921 0.899 - 0.859 0.856 0.951 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
77. F44B9.7 mdt-30 3651 6.252 0.880 0.866 0.860 0.866 - 0.950 0.872 0.958 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
78. H19N07.1 erfa-3 19869 6.252 0.914 0.909 0.936 0.909 - 0.872 0.741 0.971 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
79. T03F1.2 coq-4 3093 6.249 0.878 0.861 0.928 0.861 - 0.951 0.856 0.914 Ubiquinone biosynthesis protein coq-4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P91428]
80. ZC262.8 mrps-18A 3125 6.248 0.926 0.867 0.896 0.867 - 0.849 0.883 0.960 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498835]
81. C17H12.13 anat-1 12995 6.248 0.870 0.892 0.902 0.892 - 0.968 0.889 0.835 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
82. E02H1.6 E02H1.6 1278 6.246 0.877 0.848 0.896 0.848 - 0.959 0.907 0.911 Adenylate kinase isoenzyme 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09527]
83. W04D2.5 mrps-11 5757 6.246 0.902 0.834 0.927 0.834 - 0.923 0.875 0.951 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
84. D2023.5 mpst-1 10328 6.245 0.903 0.860 0.863 0.860 - 0.970 0.882 0.907 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
85. D2005.3 D2005.3 2986 6.242 0.908 0.815 0.950 0.815 - 0.910 0.877 0.967
86. F37E3.1 ncbp-1 5649 6.239 0.902 0.919 0.920 0.919 - 0.841 0.766 0.972 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
87. F59A2.1 npp-9 34375 6.236 0.899 0.853 0.850 0.853 - 0.953 0.880 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
88. Y46G5A.4 snrp-200 13827 6.235 0.908 0.865 0.931 0.865 - 0.892 0.821 0.953 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
89. T16G1.11 eif-3.K 14014 6.235 0.894 0.869 0.900 0.869 - 0.902 0.839 0.962 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
90. T13H5.5 mrps-18B 3430 6.234 0.907 0.833 0.861 0.833 - 0.954 0.880 0.966 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
91. Y40G12A.1 ubh-3 4142 6.232 0.866 0.867 0.908 0.867 - 0.965 0.880 0.879 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
92. Y54E5A.4 npp-4 6288 6.231 0.908 0.883 0.874 0.883 - 0.881 0.847 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
93. C25D7.8 otub-1 7941 6.23 0.891 0.888 0.893 0.888 - 0.861 0.841 0.968 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
94. R151.9 pfd-5 6951 6.229 0.909 0.814 0.881 0.814 - 0.922 0.925 0.964 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
95. K01G5.4 ran-1 32379 6.227 0.894 0.858 0.897 0.858 - 0.912 0.850 0.958 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
96. Y56A3A.19 Y56A3A.19 9680 6.226 0.892 0.845 0.834 0.845 - 0.962 0.912 0.936 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
97. R12E2.12 mrps-6 4708 6.225 0.875 0.851 0.894 0.851 - 0.978 0.892 0.884 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]
98. Y57G11C.34 mrps-7 3450 6.225 0.863 0.845 0.899 0.845 - 0.943 0.877 0.953 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
99. K04G2.2 aho-3 15189 6.222 0.819 0.857 0.880 0.857 - 0.933 0.950 0.926
100. ZK1010.3 frg-1 3533 6.221 0.866 0.892 0.876 0.892 - 0.929 0.803 0.963 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA