C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0393.2

Gene ID Gene Name Reads Transcripts Annotation
B0393.2 rbg-3 6701 B0393.2.1, B0393.2.2 RaB GAP related [Source:RefSeq peptide;Acc:NP_497979]

Genes with expression patterns similar to B0393.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0393.2 rbg-3 6701 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RaB GAP related [Source:RefSeq peptide;Acc:NP_497979]
2. C01G8.3 dhs-1 5394 7.686 0.961 0.973 0.977 0.973 0.969 0.948 0.916 0.969 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]
3. K04G2.2 aho-3 15189 7.668 0.971 0.954 0.977 0.954 0.953 0.980 0.945 0.934
4. F25B3.6 rtfo-1 11965 7.666 0.975 0.969 0.987 0.969 0.957 0.954 0.910 0.945 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
5. Y53C10A.12 hsf-1 7899 7.652 0.962 0.974 0.968 0.974 0.956 0.983 0.916 0.919 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
6. D1007.8 D1007.8 1265 7.65 0.974 0.961 0.984 0.961 0.961 0.957 0.918 0.934
7. Y41D4B.13 ced-2 10100 7.649 0.974 0.961 0.985 0.961 0.956 0.926 0.931 0.955 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
8. C08B11.3 swsn-7 11608 7.641 0.986 0.972 0.979 0.972 0.955 0.982 0.942 0.853 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
9. ZK353.1 cyy-1 5745 7.623 0.957 0.969 0.970 0.969 0.963 0.962 0.909 0.924 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
10. K07A12.2 egg-6 18331 7.609 0.973 0.965 0.985 0.965 0.946 0.944 0.913 0.918 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
11. M04B2.1 mep-1 14260 7.606 0.937 0.966 0.987 0.966 0.979 0.969 0.938 0.864 MOG interacting and ectopic P-granules protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21502]
12. B0334.11 ooc-3 5475 7.599 0.980 0.951 0.972 0.951 0.982 0.978 0.862 0.923
13. R06A4.4 imb-2 10302 7.595 0.945 0.962 0.984 0.962 0.971 0.954 0.902 0.915 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
14. F57B9.7 flap-1 5377 7.588 0.979 0.938 0.967 0.938 0.964 0.925 0.936 0.941 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
15. Y51H1A.4 ing-3 8617 7.584 0.974 0.952 0.987 0.952 0.975 0.928 0.888 0.928 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
16. Y38C9A.2 cgp-1 11756 7.581 0.964 0.965 0.975 0.965 0.940 0.897 0.911 0.964 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
17. F59E10.1 orc-2 4698 7.581 0.959 0.961 0.940 0.961 0.981 0.962 0.893 0.924 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
18. C10C6.5 wht-2 3408 7.578 0.973 0.970 0.975 0.970 0.972 0.865 0.921 0.932 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_502164]
19. ZK1251.9 dcaf-1 10926 7.578 0.933 0.945 0.956 0.945 0.964 0.966 0.912 0.957 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
20. Y41D4B.19 npp-8 12992 7.576 0.960 0.948 0.962 0.948 0.974 0.948 0.913 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
21. F45E12.2 brf-1 4667 7.571 0.954 0.969 0.971 0.969 0.949 0.958 0.915 0.886 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
22. F43G9.5 cfim-1 9169 7.569 0.926 0.962 0.973 0.962 0.980 0.914 0.921 0.931 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
23. F43G6.9 patr-1 23000 7.567 0.982 0.961 0.972 0.961 0.938 0.941 0.886 0.926 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
24. F35G12.3 sel-5 5924 7.558 0.958 0.961 0.961 0.961 0.948 0.951 0.887 0.931 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
25. C37A2.2 pqn-20 10913 7.558 0.956 0.970 0.971 0.970 0.944 0.966 0.884 0.897 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
26. Y37D8A.9 mrg-1 14369 7.557 0.963 0.961 0.980 0.961 0.968 0.940 0.916 0.868 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
27. F53F4.3 tbcb-1 6442 7.557 0.934 0.928 0.946 0.928 0.982 0.981 0.905 0.953 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
28. R06F6.1 cdl-1 14167 7.554 0.971 0.958 0.982 0.958 0.968 0.904 0.926 0.887 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
29. Y55F3AM.12 dcap-1 8679 7.553 0.913 0.984 0.971 0.984 0.973 0.973 0.927 0.828 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
30. T05H4.14 gad-1 7979 7.552 0.943 0.980 0.980 0.980 0.946 0.951 0.923 0.849 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
31. C41C4.6 ulp-4 13338 7.551 0.940 0.933 0.951 0.933 0.966 0.961 0.922 0.945 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
32. F44G4.4 tdp-1 3335 7.55 0.961 0.963 0.962 0.963 0.947 0.917 0.908 0.929 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
33. C26E6.7 eri-9 8069 7.549 0.961 0.959 0.949 0.959 0.973 0.934 0.888 0.926 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
34. C01F6.4 fem-3 2478 7.548 0.965 0.940 0.958 0.940 0.886 0.947 0.948 0.964 Sex-determination protein fem-3 [Source:UniProtKB/Swiss-Prot;Acc:P34691]
35. F33G12.4 lrr-1 3639 7.547 0.982 0.942 0.954 0.942 0.945 0.900 0.944 0.938 Leucine-Rich Repeat protein [Source:RefSeq peptide;Acc:NP_494928]
36. C38C10.5 rgr-1 4146 7.547 0.941 0.962 0.977 0.962 0.944 0.936 0.931 0.894 Mediator of RNA polymerase II transcription subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:Q03570]
37. F01F1.4 rabn-5 5269 7.542 0.976 0.955 0.956 0.955 0.950 0.962 0.923 0.865 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
38. C36A4.5 maph-1.3 15493 7.538 0.971 0.938 0.974 0.938 0.962 0.875 0.923 0.957 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
39. C16C2.3 ocrl-1 2754 7.537 0.970 0.942 0.978 0.942 0.966 0.939 0.915 0.885 OCRL (Lowe's oculocerebrorenal syndrome protein) homolog [Source:RefSeq peptide;Acc:NP_001122420]
40. C45B11.1 pak-2 6114 7.536 0.975 0.980 0.981 0.980 0.952 0.939 0.840 0.889 Serine/threonine-protein kinase pak-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFU0]
41. F26F4.7 nhl-2 13541 7.535 0.947 0.950 0.957 0.950 0.965 0.944 0.921 0.901 NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
42. Y38A10A.6 smut-1 1589 7.534 0.965 0.941 0.949 0.941 0.936 0.924 0.931 0.947 Synthetic MUTator [Source:RefSeq peptide;Acc:NP_504574]
43. T26A8.1 T26A8.1 4387 7.534 0.942 0.966 0.965 0.966 0.967 0.944 0.907 0.877
44. R07E5.14 rnp-4 11659 7.534 0.929 0.957 0.953 0.957 0.978 0.948 0.921 0.891 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
45. C04G2.6 dis-3 5048 7.534 0.920 0.955 0.967 0.955 0.987 0.898 0.906 0.946 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
46. Y59A8B.12 Y59A8B.12 2566 7.533 0.935 0.952 0.951 0.952 0.933 0.975 0.944 0.891
47. W01A8.5 tofu-5 5678 7.526 0.960 0.969 0.960 0.969 0.969 0.859 0.919 0.921 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
48. T03D8.1 num-1 8909 7.524 0.960 0.974 0.970 0.974 0.968 0.948 0.825 0.905 Numb-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTY6]
49. C38C10.2 slc-17.2 6819 7.524 0.951 0.971 0.970 0.971 0.914 0.894 0.889 0.964 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
50. F58G11.6 ccz-1 5655 7.522 0.964 0.975 0.966 0.975 0.933 0.829 0.939 0.941
51. F41H10.11 sand-1 5039 7.518 0.971 0.965 0.967 0.965 0.904 0.909 0.884 0.953 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
52. T08G5.5 vps-39 4669 7.517 0.966 0.958 0.980 0.958 0.902 0.920 0.904 0.929 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_001041163]
53. T01B7.6 trcs-2 9792 7.517 0.972 0.982 0.978 0.982 0.951 0.950 0.890 0.812 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
54. B0336.6 abi-1 3184 7.516 0.956 0.938 0.976 0.938 0.976 0.892 0.889 0.951 ABl Interactor homolog [Source:RefSeq peptide;Acc:NP_498224]
55. F52C9.7 mog-3 9880 7.516 0.956 0.947 0.970 0.947 0.962 0.966 0.866 0.902 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
56. B0240.4 npp-22 5510 7.514 0.954 0.945 0.968 0.945 0.969 0.935 0.894 0.904 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
57. Y43F4B.3 set-25 8036 7.513 0.947 0.975 0.973 0.975 0.945 0.938 0.930 0.830 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
58. F48E8.3 F48E8.3 4186 7.512 0.925 0.925 0.923 0.925 0.981 0.951 0.941 0.941
59. Y57E12AL.5 mdt-6 3828 7.51 0.954 0.950 0.955 0.950 0.975 0.915 0.901 0.910 Mediator of RNA polymerase II transcription subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N337]
60. C46A5.9 hcf-1 6295 7.508 0.940 0.973 0.957 0.973 0.964 0.939 0.912 0.850 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
61. D2092.2 ppfr-2 3944 7.507 0.965 0.950 0.928 0.950 0.967 0.961 0.860 0.926 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_491907]
62. F10E9.8 sas-4 3703 7.507 0.974 0.930 0.959 0.930 0.961 0.928 0.900 0.925 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
63. T22C1.3 T22C1.3 2305 7.506 0.933 0.954 0.961 0.954 0.972 0.897 0.915 0.920
64. T24D1.1 sqv-5 12569 7.506 0.990 0.953 0.989 0.953 0.956 0.886 0.842 0.937 Chondroitin sulfate synthase sqv-5 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z1Z1]
65. R03D7.7 nos-1 8407 7.504 0.971 0.973 0.972 0.973 0.924 0.888 0.930 0.873 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
66. F55G1.8 plk-3 12036 7.503 0.945 0.973 0.964 0.973 0.951 0.903 0.867 0.927 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
67. R08C7.10 wapl-1 4967 7.502 0.939 0.937 0.959 0.937 0.942 0.924 0.919 0.945 WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
68. C23G10.8 C23G10.8 4642 7.502 0.843 0.979 0.947 0.979 0.973 0.889 0.943 0.949
69. C18E9.3 szy-20 6819 7.502 0.890 0.957 0.948 0.957 0.965 0.917 0.898 0.970 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
70. ZK973.11 ZK973.11 2422 7.5 0.961 0.935 0.986 0.935 0.920 0.929 0.906 0.928
71. F18C5.2 wrn-1 3792 7.499 0.940 0.976 0.967 0.976 0.951 0.917 0.860 0.912 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
72. W08D2.5 catp-6 7281 7.498 0.955 0.930 0.975 0.930 0.951 0.934 0.899 0.924 Probable cation-transporting ATPase W08D2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q27533]
73. Y71G12B.9 lin-65 7476 7.496 0.947 0.955 0.943 0.955 0.952 0.950 0.906 0.888 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
74. K08E7.1 eak-7 18960 7.495 0.937 0.953 0.961 0.953 0.933 0.941 0.894 0.923 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
75. R12E2.10 egg-5 9154 7.493 0.963 0.941 0.964 0.941 0.969 0.878 0.921 0.916 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_491316]
76. C56A3.5 C56A3.5 2260 7.493 0.954 0.928 0.970 0.928 0.969 0.911 0.890 0.943
77. C14B1.4 wdr-5.1 4424 7.492 0.970 0.948 0.963 0.948 0.959 0.897 0.921 0.886 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
78. B0035.3 B0035.3 4118 7.492 0.978 0.949 0.974 0.949 0.927 0.942 0.896 0.877
79. R12C12.2 ran-5 14517 7.492 0.938 0.957 0.955 0.957 0.940 0.973 0.886 0.886 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
80. ZK686.2 ZK686.2 3064 7.492 0.911 0.950 0.978 0.950 0.962 0.956 0.925 0.860 Putative ATP-dependent RNA helicase ZK686.2 [Source:UniProtKB/Swiss-Prot;Acc:P34668]
81. F35H8.3 zfp-2 2599 7.491 0.975 0.935 0.974 0.935 0.963 0.878 0.907 0.924 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
82. R06C1.2 fdps-1 4504 7.491 0.951 0.971 0.938 0.971 0.944 0.915 0.892 0.909 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
83. C43E11.10 cdc-6 5331 7.49 0.947 0.971 0.948 0.971 0.898 0.926 0.884 0.945 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
84. C10C5.6 daf-15 8724 7.489 0.963 0.950 0.961 0.950 0.960 0.962 0.830 0.913 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
85. C55B7.5 uri-1 3156 7.487 0.951 0.932 0.964 0.932 0.953 0.924 0.925 0.906 URI (Unconventional prefoldin RPB5 Interactor) homolog [Source:RefSeq peptide;Acc:NP_491870]
86. C48D1.2 ced-3 4123 7.487 0.934 0.941 0.963 0.941 0.981 0.890 0.931 0.906 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
87. K07D4.3 rpn-11 8834 7.486 0.947 0.939 0.961 0.939 0.962 0.940 0.939 0.859 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
88. ZK1320.12 taf-8 3558 7.486 0.975 0.947 0.981 0.947 0.962 0.917 0.872 0.885 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
89. C24B5.2 spas-1 3372 7.484 0.959 0.972 0.971 0.972 0.935 0.911 0.919 0.845 Probable spastin homolog spas-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8MNV0]
90. B0285.5 hse-5 6071 7.484 0.949 0.977 0.981 0.977 0.938 0.895 0.851 0.916 D-glucuronyl C5-epimerase [Source:UniProtKB/Swiss-Prot;Acc:P46555]
91. C55A6.2 ttll-5 5158 7.483 0.911 0.959 0.934 0.959 0.969 0.961 0.927 0.863 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
92. F30F8.3 gras-1 5902 7.482 0.967 0.968 0.979 0.968 0.926 0.941 0.815 0.918 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
93. T19C3.8 fem-2 9225 7.481 0.952 0.962 0.986 0.962 0.966 0.927 0.893 0.833 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
94. C53A5.3 hda-1 18413 7.48 0.963 0.976 0.978 0.976 0.921 0.918 0.911 0.837 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
95. B0414.5 cpb-3 11584 7.477 0.942 0.954 0.974 0.954 0.973 0.841 0.912 0.927 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
96. F54D5.11 F54D5.11 2756 7.476 0.959 0.931 0.986 0.931 0.949 0.873 0.933 0.914 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
97. D2013.2 wdfy-2 7286 7.476 0.910 0.953 0.950 0.953 0.951 0.959 0.867 0.933 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
98. E01B7.1 E01B7.1 2501 7.476 0.927 0.957 0.972 0.957 0.971 0.820 0.957 0.915
99. Y42G9A.6 wht-7 2348 7.473 0.959 0.944 0.978 0.944 0.980 0.915 0.890 0.863 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
100. Y38E10A.6 ceh-100 5505 7.471 0.916 0.960 0.944 0.960 0.944 0.950 0.883 0.914 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]

There are 2313 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA