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Results for D2007.4

Gene ID Gene Name Reads Transcripts Annotation
D2007.4 mrpl-18 2880 D2007.4 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]

Genes with expression patterns similar to D2007.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D2007.4 mrpl-18 2880 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
2. T01E8.6 mrps-14 9328 7.663 0.936 0.956 0.954 0.956 0.983 0.984 0.952 0.942 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
3. F28H1.3 aars-2 13537 7.643 0.926 0.961 0.942 0.961 0.983 0.951 0.942 0.977 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
4. F32A5.7 lsm-4 3785 7.641 0.961 0.957 0.933 0.957 0.975 0.980 0.957 0.921 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
5. Y54E5A.4 npp-4 6288 7.641 0.945 0.958 0.961 0.958 0.975 0.950 0.921 0.973 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
6. F23F1.1 nfyc-1 9983 7.64 0.921 0.940 0.944 0.940 0.967 0.974 0.974 0.980 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
7. F58E10.3 ddx-17 15107 7.639 0.948 0.951 0.955 0.951 0.967 0.966 0.934 0.967 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
8. R12C12.2 ran-5 14517 7.638 0.957 0.941 0.943 0.941 0.982 0.945 0.951 0.978 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
9. F58D5.1 hrp-2 17211 7.637 0.952 0.955 0.940 0.955 0.977 0.950 0.939 0.969 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
10. R07E5.14 rnp-4 11659 7.634 0.966 0.947 0.928 0.947 0.968 0.964 0.962 0.952 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
11. C48D1.2 ced-3 4123 7.63 0.957 0.956 0.951 0.956 0.959 0.957 0.959 0.935 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
12. T23H2.1 npp-12 12425 7.622 0.909 0.959 0.932 0.959 0.984 0.973 0.938 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
13. F59A2.1 npp-9 34375 7.622 0.936 0.938 0.947 0.938 0.959 0.984 0.954 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
14. T08B2.9 fars-1 12650 7.619 0.944 0.943 0.953 0.943 0.958 0.951 0.966 0.961 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
15. W02B12.3 rsp-1 9235 7.617 0.954 0.948 0.925 0.948 0.963 0.964 0.935 0.980 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
16. Y37D8A.9 mrg-1 14369 7.616 0.932 0.956 0.928 0.956 0.967 0.973 0.970 0.934 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
17. Y73B6BL.33 hrpf-2 4443 7.615 0.930 0.977 0.934 0.977 0.967 0.951 0.928 0.951 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
18. T21D12.3 pqbp-1.1 5755 7.613 0.947 0.971 0.940 0.971 0.966 0.928 0.954 0.936 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
19. C33H5.12 rsp-6 23342 7.61 0.947 0.945 0.943 0.945 0.973 0.943 0.948 0.966 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
20. T19B4.2 npp-7 13073 7.607 0.904 0.949 0.961 0.949 0.981 0.962 0.958 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
21. Y116A8C.42 snr-1 17062 7.605 0.911 0.947 0.932 0.947 0.971 0.955 0.968 0.974 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
22. CC4.3 smu-1 4169 7.605 0.948 0.953 0.952 0.953 0.949 0.975 0.932 0.943 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
23. T06A10.4 lsy-13 7631 7.605 0.904 0.938 0.935 0.938 0.983 0.960 0.975 0.972
24. C08B11.5 sap-49 10553 7.601 0.932 0.970 0.928 0.970 0.974 0.956 0.942 0.929 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
25. F22D6.3 nars-1 18624 7.599 0.954 0.939 0.940 0.939 0.973 0.966 0.914 0.974 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
26. W01G7.3 rpb-11 7826 7.598 0.971 0.935 0.921 0.935 0.983 0.951 0.964 0.938 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
27. Y37E3.15 npp-13 7250 7.596 0.932 0.942 0.962 0.942 0.979 0.936 0.942 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
28. F42A6.7 hrp-1 28201 7.596 0.946 0.940 0.962 0.940 0.982 0.939 0.948 0.939 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
29. B0205.9 B0205.9 3651 7.596 0.941 0.958 0.968 0.958 0.935 0.952 0.943 0.941
30. K02F3.11 rnp-5 6205 7.595 0.929 0.952 0.921 0.952 0.967 0.973 0.940 0.961 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
31. F32E10.6 cec-5 10643 7.595 0.930 0.955 0.926 0.955 0.964 0.968 0.932 0.965 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
32. T28D9.2 rsp-5 6460 7.595 0.935 0.933 0.919 0.933 0.952 0.984 0.970 0.969 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
33. B0511.7 B0511.7 1070 7.593 0.923 0.935 0.952 0.935 0.976 0.967 0.955 0.950
34. K01G5.4 ran-1 32379 7.589 0.958 0.933 0.902 0.933 0.973 0.962 0.960 0.968 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
35. Y37D8A.11 cec-7 8801 7.585 0.896 0.944 0.945 0.944 0.967 0.971 0.971 0.947 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
36. Y41D4B.19 npp-8 12992 7.584 0.924 0.945 0.962 0.945 0.955 0.978 0.966 0.909 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
37. W06H3.3 ctps-1 8363 7.584 0.923 0.950 0.937 0.950 0.970 0.974 0.958 0.922 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
38. K08F4.2 gtbp-1 25222 7.584 0.903 0.949 0.938 0.949 0.963 0.979 0.947 0.956 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
39. B0464.7 baf-1 10161 7.583 0.956 0.956 0.900 0.956 0.983 0.928 0.953 0.951 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
40. Y43F8C.8 mrps-28 4036 7.583 0.935 0.959 0.882 0.959 0.966 0.976 0.947 0.959 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
41. ZK1010.3 frg-1 3533 7.582 0.932 0.928 0.965 0.928 0.983 0.956 0.914 0.976 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
42. F56D2.6 ddx-15 12282 7.581 0.882 0.960 0.945 0.960 0.979 0.962 0.938 0.955 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
43. ZK863.6 dpy-30 16177 7.58 0.947 0.953 0.946 0.953 0.970 0.910 0.927 0.974 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
44. F53F10.5 npp-11 3378 7.58 0.946 0.955 0.908 0.955 0.972 0.982 0.923 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
45. K11D12.2 pqn-51 15951 7.579 0.932 0.958 0.953 0.958 0.975 0.947 0.921 0.935 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
46. T19C3.8 fem-2 9225 7.578 0.959 0.933 0.957 0.933 0.969 0.953 0.905 0.969 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
47. K08E7.1 eak-7 18960 7.577 0.937 0.969 0.929 0.969 0.974 0.926 0.919 0.954 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
48. ZK742.1 xpo-1 20741 7.575 0.912 0.963 0.948 0.963 0.977 0.939 0.917 0.956 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
49. Y53C12B.3 nos-3 20231 7.574 0.909 0.929 0.963 0.929 0.965 0.960 0.978 0.941 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
50. F10B5.5 pch-2 2299 7.574 0.940 0.938 0.934 0.938 0.951 0.940 0.985 0.948 Putative pachytene checkpoint protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09535]
51. F22B5.9 fars-3 7209 7.573 0.910 0.909 0.941 0.909 0.979 0.988 0.964 0.973 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
52. T22C1.3 T22C1.3 2305 7.573 0.956 0.926 0.945 0.926 0.955 0.976 0.946 0.943
53. Y34D9A.1 mrpl-38 5291 7.572 0.947 0.935 0.921 0.935 0.966 0.952 0.938 0.978 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
54. W03G1.6 pig-1 5015 7.571 0.903 0.951 0.908 0.951 0.982 0.957 0.955 0.964 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
55. Y43F4B.4 npp-18 4780 7.57 0.963 0.947 0.905 0.947 0.963 0.941 0.959 0.945 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
56. R53.2 dtmk-1 6821 7.569 0.957 0.951 0.940 0.951 0.974 0.981 0.905 0.910 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
57. F41H10.4 F41H10.4 3295 7.569 0.937 0.922 0.972 0.922 0.978 0.935 0.941 0.962
58. F32H2.4 thoc-3 3861 7.567 0.938 0.941 0.947 0.941 0.975 0.944 0.916 0.965 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
59. ZK1128.6 ttll-4 6059 7.564 0.921 0.953 0.955 0.953 0.944 0.976 0.940 0.922 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
60. H17B01.4 emc-1 9037 7.562 0.936 0.967 0.933 0.967 0.979 0.908 0.909 0.963 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
61. B0035.3 B0035.3 4118 7.562 0.944 0.923 0.943 0.923 0.984 0.937 0.953 0.955
62. Y17G7A.1 hmg-12 29989 7.562 0.930 0.923 0.942 0.923 0.978 0.948 0.949 0.969 HMG [Source:RefSeq peptide;Acc:NP_496544]
63. ZC434.7 ZC434.7 2308 7.561 0.966 0.923 0.920 0.923 0.930 0.979 0.954 0.966
64. T12E12.2 cec-6 4758 7.561 0.875 0.942 0.955 0.942 0.981 0.947 0.946 0.973 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
65. C49H3.8 arp-11 1815 7.561 0.941 0.911 0.928 0.911 0.956 0.983 0.979 0.952 Actin-Related Proteins [Source:RefSeq peptide;Acc:NP_501314]
66. F32H2.1 snpc-4 7581 7.559 0.931 0.939 0.903 0.939 0.977 0.973 0.973 0.924 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
67. T16G1.11 eif-3.K 14014 7.559 0.946 0.925 0.942 0.925 0.973 0.938 0.946 0.964 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
68. F43G9.9 cpn-1 14505 7.559 0.964 0.941 0.947 0.941 0.967 0.922 0.908 0.969 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
69. C08B6.9 aos-1 3892 7.558 0.966 0.928 0.924 0.928 0.979 0.969 0.965 0.899 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
70. K07A1.12 lin-53 15817 7.557 0.951 0.942 0.934 0.942 0.934 0.964 0.967 0.923 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
71. K11H3.6 mrpl-36 7328 7.557 0.950 0.940 0.939 0.940 0.967 0.959 0.962 0.900 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
72. C34E10.2 gop-2 5684 7.557 0.947 0.952 0.943 0.952 0.959 0.980 0.943 0.881 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
73. C25A1.4 C25A1.4 15507 7.555 0.960 0.953 0.918 0.953 0.969 0.961 0.944 0.897
74. Y38A8.3 ulp-2 7403 7.554 0.915 0.923 0.953 0.923 0.988 0.974 0.897 0.981 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
75. F58B3.5 mars-1 6729 7.553 0.901 0.930 0.915 0.930 0.977 0.975 0.960 0.965 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
76. K12C11.2 smo-1 12784 7.549 0.935 0.949 0.888 0.949 0.979 0.945 0.963 0.941 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
77. F44B9.7 mdt-30 3651 7.548 0.929 0.928 0.915 0.928 0.967 0.964 0.959 0.958 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
78. Y56A3A.29 ung-1 1900 7.548 0.907 0.940 0.928 0.940 0.970 0.976 0.928 0.959 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
79. C02B10.5 C02B10.5 9171 7.547 0.967 0.877 0.934 0.877 0.976 0.978 0.964 0.974
80. ZK1058.4 ccdc-47 8879 7.545 0.938 0.965 0.933 0.965 0.965 0.955 0.895 0.929 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
81. ZK353.1 cyy-1 5745 7.545 0.934 0.960 0.905 0.960 0.967 0.958 0.931 0.930 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
82. F43G9.5 cfim-1 9169 7.544 0.964 0.932 0.951 0.932 0.945 0.961 0.937 0.922 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
83. T17E9.2 nmt-1 8017 7.544 0.938 0.961 0.950 0.961 0.956 0.943 0.889 0.946 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
84. C14B1.4 wdr-5.1 4424 7.543 0.925 0.956 0.930 0.956 0.944 0.952 0.950 0.930 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
85. Y46G5A.4 snrp-200 13827 7.543 0.875 0.938 0.941 0.938 0.970 0.962 0.940 0.979 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
86. R74.8 R74.8 7722 7.541 0.927 0.942 0.921 0.942 0.939 0.958 0.957 0.955
87. F01F1.8 cct-6 29460 7.541 0.935 0.961 0.934 0.961 0.947 0.979 0.929 0.895 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
88. Y54E5A.6 Y54E5A.6 770 7.541 0.903 0.928 0.942 0.928 0.970 0.979 0.983 0.908
89. T02G5.9 kars-1 9763 7.541 0.914 0.938 0.891 0.938 0.984 0.969 0.953 0.954 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
90. Y23H5B.6 Y23H5B.6 5886 7.54 0.911 0.933 0.919 0.933 0.960 0.974 0.969 0.941
91. F52C9.7 mog-3 9880 7.54 0.945 0.925 0.938 0.925 0.970 0.961 0.951 0.925 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
92. C36B1.3 rpb-3 4442 7.539 0.968 0.932 0.911 0.932 0.962 0.959 0.897 0.978 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
93. H27M09.2 rpb-5 4744 7.539 0.933 0.919 0.938 0.919 0.943 0.976 0.974 0.937 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
94. C34E10.5 prmt-5 12277 7.538 0.887 0.952 0.940 0.952 0.977 0.980 0.923 0.927 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
95. Y71G12B.9 lin-65 7476 7.536 0.910 0.936 0.922 0.936 0.964 0.973 0.960 0.935 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
96. D2030.8 D2030.8 2645 7.534 0.958 0.930 0.949 0.930 0.958 0.985 0.916 0.908
97. ZC262.8 mrps-18A 3125 7.534 0.945 0.933 0.899 0.933 0.958 0.956 0.960 0.950 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498835]
98. Y111B2A.18 rsp-3 43731 7.533 0.936 0.954 0.928 0.954 0.959 0.920 0.926 0.956 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
99. ZK652.1 snr-5 5993 7.533 0.888 0.955 0.907 0.955 0.973 0.975 0.939 0.941 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
100. Y39G10AR.7 ekl-7 7072 7.532 0.877 0.916 0.911 0.916 0.985 0.973 0.977 0.977

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA