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Results for Y54E10BR.6

Gene ID Gene Name Reads Transcripts Annotation
Y54E10BR.6 rpb-7 2942 Y54E10BR.6 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_491093]

Genes with expression patterns similar to Y54E10BR.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54E10BR.6 rpb-7 2942 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_491093]
2. R07E5.14 rnp-4 11659 7.623 0.965 0.935 0.937 0.935 0.963 0.974 0.981 0.933 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
3. K07A1.12 lin-53 15817 7.61 0.950 0.919 0.937 0.919 0.979 0.984 0.956 0.966 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
4. T21B10.7 cct-2 13999 7.595 0.948 0.939 0.943 0.939 0.975 0.963 0.959 0.929 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
5. W08E3.1 snr-2 14849 7.594 0.950 0.951 0.929 0.951 0.961 0.968 0.985 0.899 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
6. T21B10.1 mrpl-50 14595 7.582 0.947 0.948 0.904 0.948 0.974 0.964 0.962 0.935 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
7. C26E6.7 eri-9 8069 7.565 0.933 0.942 0.956 0.942 0.967 0.975 0.958 0.892 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
8. K08F4.2 gtbp-1 25222 7.561 0.943 0.942 0.896 0.942 0.984 0.957 0.975 0.922 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
9. F09G2.9 attf-2 14771 7.557 0.934 0.927 0.952 0.927 0.953 0.975 0.933 0.956 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
10. F01F1.8 cct-6 29460 7.556 0.945 0.936 0.907 0.936 0.941 0.968 0.953 0.970 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
11. Y71F9B.4 snr-7 13542 7.554 0.951 0.933 0.901 0.933 0.984 0.978 0.947 0.927 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
12. R74.8 R74.8 7722 7.553 0.965 0.936 0.940 0.936 0.959 0.977 0.954 0.886
13. W06H3.3 ctps-1 8363 7.552 0.955 0.958 0.890 0.958 0.955 0.974 0.966 0.896 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
14. T24F1.1 raga-1 16171 7.549 0.967 0.958 0.930 0.958 0.913 0.937 0.958 0.928 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
15. C08F8.1 pfd-1 10199 7.548 0.937 0.937 0.895 0.937 0.972 0.966 0.933 0.971 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
16. Y116A8C.34 cyn-13 2972 7.548 0.936 0.937 0.921 0.937 0.957 0.986 0.936 0.938 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
17. Y37D8A.9 mrg-1 14369 7.547 0.950 0.942 0.931 0.942 0.973 0.967 0.948 0.894 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
18. ZK863.6 dpy-30 16177 7.547 0.959 0.940 0.880 0.940 0.965 0.927 0.969 0.967 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
19. K01G5.4 ran-1 32379 7.536 0.956 0.947 0.950 0.947 0.948 0.935 0.927 0.926 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
20. F21C3.4 rde-2 6286 7.534 0.937 0.932 0.918 0.932 0.970 0.973 0.918 0.954
21. Y55F3AR.3 cct-8 17979 7.533 0.941 0.924 0.905 0.924 0.916 0.968 0.969 0.986 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
22. F16D3.4 tbcd-1 2159 7.533 0.925 0.946 0.958 0.946 0.974 0.966 0.944 0.874 TuBulin folding Cofactor D homolog [Source:RefSeq peptide;Acc:NP_492270]
23. T24H10.3 dnj-23 11446 7.531 0.942 0.926 0.936 0.926 0.938 0.966 0.941 0.956 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
24. M88.7 cisd-3.1 5713 7.531 0.895 0.948 0.906 0.948 0.971 0.947 0.945 0.971 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
25. Y116A8C.42 snr-1 17062 7.527 0.942 0.942 0.917 0.942 0.956 0.944 0.966 0.918 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
26. K07D4.3 rpn-11 8834 7.526 0.930 0.934 0.955 0.934 0.966 0.930 0.960 0.917 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
27. F53A2.4 nud-1 7818 7.523 0.930 0.939 0.940 0.939 0.959 0.986 0.975 0.855 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
28. W01A8.5 tofu-5 5678 7.521 0.948 0.942 0.925 0.942 0.967 0.982 0.981 0.834 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
29. C28A5.1 C28A5.1 1076 7.52 0.941 0.926 0.896 0.926 0.992 0.978 0.959 0.902
30. W06E11.4 sbds-1 6701 7.519 0.922 0.961 0.911 0.961 0.963 0.969 0.925 0.907 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
31. Y37E3.3 rpb-10 4051 7.518 0.962 0.938 0.915 0.938 0.971 0.956 0.953 0.885 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
32. Y14H12B.2 Y14H12B.2 6496 7.516 0.945 0.934 0.931 0.934 0.942 0.984 0.954 0.892
33. F59A2.1 npp-9 34375 7.516 0.944 0.943 0.883 0.943 0.962 0.986 0.955 0.900 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
34. T28D9.2 rsp-5 6460 7.516 0.957 0.947 0.939 0.947 0.965 0.969 0.917 0.875 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
35. R09B3.5 mag-1 7496 7.513 0.961 0.927 0.949 0.927 0.961 0.951 0.922 0.915 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
36. F43G9.5 cfim-1 9169 7.512 0.948 0.906 0.922 0.906 0.975 0.976 0.964 0.915 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
37. T28D9.10 snr-3 9995 7.512 0.962 0.938 0.839 0.938 0.983 0.977 0.971 0.904 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
38. F10G7.3 unc-85 5206 7.509 0.917 0.957 0.948 0.957 0.987 0.941 0.925 0.877 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
39. K11H3.6 mrpl-36 7328 7.504 0.928 0.954 0.889 0.954 0.964 0.953 0.965 0.897 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
40. Y73B6BL.32 lsm-8 11002 7.504 0.953 0.941 0.908 0.941 0.965 0.949 0.953 0.894 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
41. Y62E10A.11 mdt-9 5971 7.503 0.945 0.949 0.911 0.949 0.932 0.974 0.936 0.907 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
42. CC4.3 smu-1 4169 7.5 0.932 0.947 0.909 0.947 0.952 0.983 0.952 0.878 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
43. C34E10.2 gop-2 5684 7.5 0.952 0.927 0.929 0.927 0.970 0.982 0.968 0.845 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
44. Y62E10A.12 lsm-3 4322 7.499 0.948 0.908 0.888 0.908 0.976 0.978 0.975 0.918 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
45. R06C1.2 fdps-1 4504 7.499 0.944 0.928 0.969 0.928 0.935 0.908 0.957 0.930 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
46. K08E7.1 eak-7 18960 7.496 0.947 0.930 0.930 0.930 0.936 0.954 0.927 0.942 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
47. Y54E5A.6 Y54E5A.6 770 7.496 0.927 0.943 0.911 0.943 0.965 0.972 0.933 0.902
48. T05C12.7 cct-1 41264 7.496 0.937 0.958 0.917 0.958 0.927 0.904 0.948 0.947 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
49. C25A1.4 C25A1.4 15507 7.496 0.962 0.953 0.946 0.953 0.970 0.965 0.950 0.797
50. F58E10.3 ddx-17 15107 7.495 0.949 0.932 0.911 0.932 0.940 0.962 0.940 0.929 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
51. F28H1.3 aars-2 13537 7.494 0.945 0.931 0.908 0.931 0.951 0.951 0.943 0.934 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
52. ZK1098.5 trpp-3 3389 7.49 0.919 0.910 0.899 0.910 0.938 0.974 0.976 0.964 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
53. ZC410.2 mppb-1 3991 7.49 0.927 0.946 0.862 0.946 0.953 0.969 0.962 0.925 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
54. C36A4.5 maph-1.3 15493 7.489 0.919 0.929 0.938 0.929 0.973 0.970 0.969 0.862 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
55. C37A2.4 cye-1 4158 7.488 0.909 0.958 0.937 0.958 0.933 0.968 0.972 0.853 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
56. F32A5.7 lsm-4 3785 7.487 0.976 0.912 0.921 0.912 0.951 0.972 0.944 0.899 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
57. F26F4.11 rpb-8 7601 7.487 0.964 0.927 0.904 0.927 0.957 0.981 0.954 0.873 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
58. C14B1.4 wdr-5.1 4424 7.485 0.901 0.935 0.914 0.935 0.950 0.979 0.969 0.902 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
59. Y43F4B.4 npp-18 4780 7.485 0.941 0.923 0.940 0.923 0.983 0.959 0.934 0.882 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
60. T19C3.8 fem-2 9225 7.484 0.914 0.915 0.911 0.915 0.964 0.978 0.947 0.940 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
61. F58G11.6 ccz-1 5655 7.484 0.933 0.936 0.892 0.936 0.970 0.968 0.966 0.883
62. K01G5.2 hpl-2 6781 7.483 0.943 0.955 0.903 0.955 0.981 0.943 0.916 0.887 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
63. Y55F3AM.12 dcap-1 8679 7.48 0.946 0.943 0.940 0.943 0.965 0.949 0.934 0.860 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
64. Y41D4B.19 npp-8 12992 7.479 0.928 0.957 0.914 0.957 0.961 0.979 0.942 0.841 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
65. T12G3.5 mrpl-51 5192 7.479 0.981 0.916 0.921 0.916 0.896 0.972 0.959 0.918 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
66. F44G4.4 tdp-1 3335 7.478 0.918 0.948 0.920 0.948 0.958 0.972 0.946 0.868 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
67. C34D4.12 cyn-12 7363 7.478 0.925 0.940 0.901 0.940 0.988 0.960 0.964 0.860 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
68. C16A11.3 C16A11.3 3250 7.474 0.933 0.943 0.935 0.943 0.972 0.973 0.927 0.848
69. R151.9 pfd-5 6951 7.473 0.942 0.902 0.908 0.902 0.939 0.941 0.960 0.979 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
70. T10B5.5 cct-7 24616 7.473 0.914 0.936 0.912 0.936 0.930 0.926 0.949 0.970 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
71. F58B3.5 mars-1 6729 7.472 0.918 0.957 0.864 0.957 0.960 0.953 0.934 0.929 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
72. C47B2.9 C47B2.9 4096 7.472 0.967 0.954 0.861 0.954 0.952 0.964 0.957 0.863
73. F32H2.1 snpc-4 7581 7.472 0.939 0.948 0.954 0.948 0.930 0.943 0.916 0.894 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
74. B0303.15 mrpl-11 9889 7.471 0.931 0.907 0.883 0.907 0.970 0.978 0.972 0.923 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
75. Y97E10AR.5 rpb-9 3598 7.471 0.968 0.949 0.918 0.949 0.903 0.924 0.961 0.899 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
76. Y71G12B.9 lin-65 7476 7.469 0.906 0.953 0.936 0.953 0.963 0.953 0.917 0.888 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
77. T03F6.5 lis-1 8818 7.467 0.922 0.939 0.897 0.939 0.954 0.937 0.923 0.956 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
78. C01F6.8 icln-1 6586 7.467 0.930 0.934 0.876 0.934 0.941 0.969 0.962 0.921 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
79. C49H3.10 xpo-3 9101 7.465 0.897 0.937 0.910 0.937 0.959 0.979 0.941 0.905 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
80. F59E12.11 sam-4 8179 7.463 0.933 0.909 0.929 0.909 0.972 0.944 0.947 0.920
81. C17H12.13 anat-1 12995 7.462 0.946 0.939 0.932 0.939 0.948 0.967 0.940 0.851 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
82. R06A4.4 imb-2 10302 7.461 0.933 0.905 0.936 0.905 0.952 0.945 0.945 0.940 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
83. ZK1010.3 frg-1 3533 7.461 0.949 0.916 0.902 0.916 0.949 0.961 0.923 0.945 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
84. D2023.5 mpst-1 10328 7.459 0.926 0.934 0.843 0.934 0.971 0.986 0.972 0.893 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
85. Y43F4B.3 set-25 8036 7.458 0.902 0.960 0.924 0.960 0.960 0.966 0.908 0.878 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
86. F53F10.5 npp-11 3378 7.456 0.932 0.908 0.944 0.908 0.953 0.975 0.951 0.885 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
87. T06A10.4 lsy-13 7631 7.455 0.927 0.960 0.916 0.960 0.916 0.955 0.930 0.891
88. M01B12.3 arx-7 7584 7.454 0.935 0.948 0.923 0.948 0.925 0.884 0.953 0.938 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
89. T23H2.1 npp-12 12425 7.454 0.938 0.926 0.942 0.926 0.923 0.968 0.914 0.917 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
90. Y47D3A.26 smc-3 6256 7.453 0.872 0.950 0.929 0.950 0.967 0.962 0.960 0.863 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
91. Y73B6BL.33 hrpf-2 4443 7.451 0.939 0.918 0.928 0.918 0.976 0.950 0.962 0.860 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
92. ZK1128.6 ttll-4 6059 7.451 0.956 0.932 0.905 0.932 0.962 0.959 0.880 0.925 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
93. ZK742.1 xpo-1 20741 7.45 0.917 0.927 0.920 0.927 0.955 0.945 0.927 0.932 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
94. Y37D8A.18 mrps-10 4551 7.45 0.945 0.896 0.910 0.896 0.978 0.960 0.955 0.910 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
95. W01G7.3 rpb-11 7826 7.448 0.952 0.944 0.947 0.944 0.912 0.934 0.927 0.888 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
96. H43I07.2 rpac-40 3342 7.448 0.943 0.935 0.932 0.935 0.970 0.979 0.941 0.813 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
97. H20J04.8 mog-2 3084 7.446 0.964 0.932 0.914 0.932 0.905 0.943 0.961 0.895 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
98. C33H5.12 rsp-6 23342 7.446 0.953 0.950 0.930 0.950 0.938 0.929 0.858 0.938 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
99. Y54E10A.11 Y54E10A.11 2415 7.446 0.942 0.898 0.896 0.898 0.993 0.979 0.947 0.893 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
100. T08B2.9 fars-1 12650 7.445 0.942 0.935 0.870 0.935 0.969 0.919 0.907 0.968 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA