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Results for F59A2.1

Gene ID Gene Name Reads Transcripts Annotation
F59A2.1 npp-9 34375 F59A2.1a.1, F59A2.1a.2, F59A2.1a.3, F59A2.1b.1, F59A2.1b.2, F59A2.1b.3 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]

Genes with expression patterns similar to F59A2.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F59A2.1 npp-9 34375 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
2. Y37D8A.9 mrg-1 14369 7.83 0.983 0.976 0.954 0.976 0.988 0.989 0.982 0.982 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
3. F26B1.3 ima-2 18826 7.817 0.973 0.979 0.972 0.979 0.987 0.972 0.987 0.968 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
4. R07E5.14 rnp-4 11659 7.811 0.968 0.977 0.977 0.977 0.978 0.975 0.979 0.980 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
5. Y37D8A.11 cec-7 8801 7.81 0.973 0.970 0.971 0.970 0.993 0.973 0.990 0.970 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
6. Y116A8C.42 snr-1 17062 7.804 0.964 0.962 0.969 0.962 0.986 0.977 0.993 0.991 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
7. Y71G12B.9 lin-65 7476 7.796 0.977 0.971 0.975 0.971 0.989 0.986 0.973 0.954 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
8. Y41D4B.19 npp-8 12992 7.795 0.982 0.971 0.981 0.971 0.971 0.989 0.990 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
9. K01G5.4 ran-1 32379 7.791 0.983 0.974 0.961 0.974 0.968 0.967 0.973 0.991 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
10. Y53C12B.3 nos-3 20231 7.79 0.972 0.975 0.963 0.975 0.984 0.957 0.980 0.984 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
11. T28D9.2 rsp-5 6460 7.788 0.991 0.959 0.955 0.959 0.968 0.991 0.973 0.992 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
12. R12C12.2 ran-5 14517 7.781 0.984 0.979 0.969 0.979 0.974 0.963 0.968 0.965 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
13. C26D10.1 ran-3 11111 7.768 0.970 0.977 0.959 0.977 0.946 0.988 0.986 0.965 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
14. T23H2.1 npp-12 12425 7.768 0.976 0.974 0.969 0.974 0.967 0.989 0.940 0.979 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
15. K07A1.12 lin-53 15817 7.768 0.969 0.973 0.964 0.973 0.987 0.972 0.984 0.946 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
16. Y14H12B.2 Y14H12B.2 6496 7.767 0.991 0.944 0.981 0.944 0.974 0.983 0.982 0.968
17. Y17G7A.1 hmg-12 29989 7.765 0.985 0.971 0.988 0.971 0.982 0.970 0.924 0.974 HMG [Source:RefSeq peptide;Acc:NP_496544]
18. K01G5.2 hpl-2 6781 7.765 0.979 0.964 0.972 0.964 0.972 0.974 0.949 0.991 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
19. K08F4.2 gtbp-1 25222 7.763 0.963 0.964 0.961 0.964 0.982 0.972 0.982 0.975 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
20. Y39G10AR.7 ekl-7 7072 7.761 0.966 0.974 0.958 0.974 0.957 0.984 0.958 0.990
21. Y47D3A.26 smc-3 6256 7.76 0.964 0.967 0.969 0.967 0.974 0.975 0.974 0.970 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
22. C34E10.2 gop-2 5684 7.758 0.983 0.969 0.946 0.969 0.984 0.977 0.971 0.959 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
23. Y54E5A.4 npp-4 6288 7.756 0.959 0.981 0.981 0.981 0.981 0.950 0.946 0.977 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
24. T25G3.4 T25G3.4 9394 7.756 0.958 0.972 0.957 0.972 0.989 0.976 0.985 0.947 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
25. Y37E3.15 npp-13 7250 7.753 0.987 0.975 0.956 0.975 0.985 0.951 0.959 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
26. F58E10.3 ddx-17 15107 7.751 0.988 0.962 0.965 0.962 0.962 0.974 0.958 0.980 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
27. Y18D10A.16 Y18D10A.16 2881 7.749 0.983 0.957 0.974 0.957 0.949 0.986 0.969 0.974
28. R06F6.1 cdl-1 14167 7.747 0.932 0.977 0.943 0.977 0.982 0.988 0.985 0.963 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
29. ZK1128.6 ttll-4 6059 7.744 0.965 0.978 0.960 0.978 0.983 0.976 0.950 0.954 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
30. C26E6.4 rpb-2 7053 7.744 0.962 0.970 0.976 0.970 0.970 0.981 0.938 0.977 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
31. F23F1.1 nfyc-1 9983 7.742 0.981 0.962 0.969 0.962 0.977 0.971 0.936 0.984 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
32. C48B4.11 C48B4.11 4384 7.742 0.973 0.974 0.973 0.974 0.970 0.954 0.955 0.969
33. ZK742.1 xpo-1 20741 7.742 0.961 0.978 0.978 0.978 0.982 0.963 0.943 0.959 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
34. H27M09.2 rpb-5 4744 7.742 0.956 0.962 0.943 0.962 0.978 0.987 0.983 0.971 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
35. F43G9.5 cfim-1 9169 7.741 0.959 0.969 0.969 0.969 0.971 0.976 0.960 0.968 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
36. CC4.3 smu-1 4169 7.738 0.958 0.978 0.949 0.978 0.977 0.975 0.957 0.966 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
37. EEED8.1 tofu-6 3962 7.736 0.976 0.958 0.953 0.958 0.979 0.972 0.971 0.969 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
38. T28D9.10 snr-3 9995 7.735 0.953 0.948 0.945 0.948 0.982 0.992 0.991 0.976 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
39. F53A2.4 nud-1 7818 7.735 0.944 0.971 0.952 0.971 0.971 0.987 0.982 0.957 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
40. C01F6.8 icln-1 6586 7.734 0.966 0.957 0.959 0.957 0.979 0.990 0.986 0.940 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
41. Y23H5B.6 Y23H5B.6 5886 7.734 0.975 0.949 0.955 0.949 0.990 0.974 0.964 0.978
42. T19B4.2 npp-7 13073 7.733 0.967 0.972 0.974 0.972 0.955 0.969 0.965 0.959 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
43. F21C3.4 rde-2 6286 7.73 0.949 0.973 0.965 0.973 0.971 0.984 0.967 0.948
44. Y113G7B.5 fog-2 2753 7.728 0.938 0.981 0.970 0.981 0.969 0.962 0.966 0.961 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
45. C26E6.7 eri-9 8069 7.727 0.976 0.980 0.926 0.980 0.965 0.985 0.969 0.946 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
46. F52F12.4 lsl-1 4055 7.727 0.958 0.966 0.946 0.966 0.974 0.986 0.985 0.946 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
47. W08E3.1 snr-2 14849 7.726 0.965 0.968 0.971 0.968 0.922 0.984 0.981 0.967 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
48. ZK1010.3 frg-1 3533 7.725 0.980 0.950 0.987 0.950 0.978 0.961 0.964 0.955 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
49. F28H1.3 aars-2 13537 7.724 0.971 0.970 0.966 0.970 0.972 0.961 0.948 0.966 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
50. B0205.9 B0205.9 3651 7.723 0.952 0.978 0.962 0.978 0.944 0.957 0.979 0.973
51. C05C8.5 C05C8.5 2655 7.722 0.963 0.962 0.939 0.962 0.994 0.988 0.965 0.949
52. F32A5.7 lsm-4 3785 7.716 0.978 0.968 0.977 0.968 0.957 0.975 0.956 0.937 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
53. F32H2.1 snpc-4 7581 7.716 0.979 0.969 0.934 0.969 0.974 0.976 0.955 0.960 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
54. C37A2.4 cye-1 4158 7.716 0.940 0.946 0.965 0.946 0.976 0.990 0.967 0.986 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
55. F56F3.1 ifet-1 25772 7.714 0.936 0.959 0.981 0.959 0.972 0.970 0.955 0.982 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
56. T06A10.4 lsy-13 7631 7.713 0.942 0.977 0.977 0.977 0.939 0.978 0.967 0.956
57. T23G11.3 gld-1 41748 7.71 0.946 0.957 0.985 0.957 0.960 0.979 0.978 0.948 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
58. T12E12.2 cec-6 4758 7.709 0.934 0.971 0.962 0.971 0.957 0.967 0.980 0.967 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
59. F09G2.9 attf-2 14771 7.708 0.985 0.980 0.965 0.980 0.973 0.965 0.944 0.916 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
60. Y73B6BL.32 lsm-8 11002 7.707 0.940 0.964 0.959 0.964 0.987 0.954 0.969 0.970 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
61. W06E11.4 sbds-1 6701 7.705 0.971 0.958 0.969 0.958 0.968 0.986 0.960 0.935 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
62. C08B11.5 sap-49 10553 7.704 0.977 0.977 0.953 0.977 0.955 0.968 0.924 0.973 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
63. Y46G5A.4 snrp-200 13827 7.704 0.953 0.970 0.966 0.970 0.976 0.965 0.924 0.980 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
64. K04G2.2 aho-3 15189 7.702 0.964 0.970 0.948 0.970 0.981 0.952 0.963 0.954
65. W06H3.3 ctps-1 8363 7.701 0.934 0.957 0.936 0.957 0.980 0.993 0.965 0.979 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
66. F42A6.7 hrp-1 28201 7.701 0.980 0.992 0.969 0.992 0.944 0.929 0.938 0.957 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
67. Y39E4B.2 snpc-1.2 5800 7.701 0.968 0.959 0.957 0.959 0.975 0.972 0.969 0.942 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
68. ZK1251.9 dcaf-1 10926 7.701 0.973 0.964 0.949 0.964 0.978 0.962 0.957 0.954 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
69. B0035.12 sart-3 7188 7.7 0.985 0.954 0.969 0.954 0.975 0.964 0.959 0.940 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
70. F41H10.4 F41H10.4 3295 7.699 0.964 0.967 0.980 0.967 0.951 0.967 0.958 0.945
71. Y54E5A.6 Y54E5A.6 770 7.699 0.933 0.944 0.971 0.944 0.995 0.989 0.959 0.964
72. Y56A3A.17 npp-16 5391 7.698 0.984 0.971 0.950 0.971 0.972 0.964 0.908 0.978 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
73. C25A1.4 C25A1.4 15507 7.698 0.955 0.958 0.958 0.958 0.989 0.973 0.973 0.934
74. C36B1.5 prp-4 2714 7.698 0.942 0.968 0.968 0.968 0.983 0.987 0.922 0.960 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
75. Y62E10A.12 lsm-3 4322 7.697 0.958 0.965 0.969 0.965 0.960 0.979 0.969 0.932 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
76. F56D2.6 ddx-15 12282 7.696 0.964 0.971 0.965 0.971 0.973 0.969 0.905 0.978 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
77. W02B12.11 W02B12.11 8336 7.696 0.962 0.951 0.944 0.951 0.975 0.974 0.984 0.955 N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
78. Y55F3AM.12 dcap-1 8679 7.695 0.960 0.976 0.966 0.976 0.972 0.976 0.963 0.906 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
79. M01E11.5 cey-3 20931 7.694 0.970 0.942 0.985 0.942 0.963 0.964 0.981 0.947 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
80. C18E9.3 szy-20 6819 7.693 0.967 0.970 0.969 0.970 0.981 0.974 0.977 0.885 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
81. Y71F9B.4 snr-7 13542 7.693 0.939 0.957 0.960 0.957 0.977 0.983 0.961 0.959 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
82. F55G1.8 plk-3 12036 7.691 0.975 0.974 0.986 0.974 0.961 0.949 0.933 0.939 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
83. F52C9.7 mog-3 9880 7.689 0.983 0.962 0.963 0.962 0.985 0.962 0.934 0.938 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
84. F15D4.1 btf-1 2519 7.687 0.961 0.973 0.956 0.973 0.969 0.959 0.981 0.915 BTAF (TBP-associated factor) homolog [Source:RefSeq peptide;Acc:NP_496802]
85. F59E12.11 sam-4 8179 7.687 0.946 0.965 0.974 0.965 0.978 0.957 0.946 0.956
86. K09H9.6 lpd-6 5459 7.686 0.959 0.937 0.959 0.937 0.985 0.992 0.981 0.936 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
87. F26F4.11 rpb-8 7601 7.686 0.921 0.967 0.948 0.967 0.979 0.990 0.935 0.979 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
88. ZK381.1 him-3 4913 7.685 0.975 0.962 0.971 0.962 0.957 0.984 0.911 0.963 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
89. JC8.6 lin-54 5789 7.685 0.964 0.973 0.935 0.973 0.967 0.934 0.978 0.961
90. C30G12.7 puf-8 5785 7.685 0.958 0.966 0.973 0.966 0.975 0.953 0.972 0.922 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
91. F58F6.4 rfc-2 2074 7.684 0.952 0.950 0.983 0.950 0.980 0.965 0.925 0.979 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
92. C07H6.5 cgh-1 60576 7.683 0.974 0.925 0.978 0.925 0.965 0.967 0.985 0.964 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
93. T19C3.8 fem-2 9225 7.683 0.961 0.972 0.971 0.972 0.973 0.967 0.954 0.913 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
94. ZK863.6 dpy-30 16177 7.681 0.955 0.975 0.960 0.975 0.964 0.925 0.961 0.966 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
95. C23G10.8 C23G10.8 4642 7.681 0.941 0.966 0.973 0.966 0.956 0.956 0.962 0.961
96. Y62E10A.11 mdt-9 5971 7.681 0.956 0.971 0.951 0.971 0.954 0.976 0.962 0.940 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
97. K12C11.2 smo-1 12784 7.681 0.977 0.953 0.941 0.953 0.979 0.941 0.948 0.989 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
98. C08B6.9 aos-1 3892 7.68 0.969 0.961 0.963 0.961 0.957 0.986 0.923 0.960 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
99. R74.8 R74.8 7722 7.68 0.955 0.978 0.952 0.978 0.959 0.953 0.972 0.933
100. K08E7.1 eak-7 18960 7.679 0.959 0.969 0.949 0.969 0.977 0.943 0.948 0.965 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA