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Results for T04A8.11

Gene ID Gene Name Reads Transcripts Annotation
T04A8.11 mrpl-16 5998 T04A8.11.1, T04A8.11.2 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]

Genes with expression patterns similar to T04A8.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T04A8.11 mrpl-16 5998 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
2. F32H2.1 snpc-4 7581 7.752 0.956 0.969 0.973 0.969 0.984 0.982 0.964 0.955 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
3. Y116A8C.42 snr-1 17062 7.701 0.963 0.972 0.966 0.972 0.976 0.974 0.906 0.972 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
4. F56D2.6 ddx-15 12282 7.699 0.923 0.954 0.979 0.954 0.982 0.983 0.959 0.965 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
5. T23H2.1 npp-12 12425 7.691 0.930 0.951 0.975 0.951 0.985 0.980 0.939 0.980 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
6. F58D5.1 hrp-2 17211 7.679 0.959 0.970 0.960 0.970 0.978 0.986 0.930 0.926 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
7. F28H1.3 aars-2 13537 7.677 0.926 0.963 0.968 0.963 0.989 0.973 0.928 0.967 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
8. T16G1.11 eif-3.K 14014 7.669 0.967 0.968 0.949 0.968 0.969 0.977 0.950 0.921 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
9. T11G6.1 hars-1 7908 7.666 0.944 0.979 0.964 0.979 0.972 0.958 0.911 0.959 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
10. C26E6.4 rpb-2 7053 7.665 0.926 0.969 0.957 0.969 0.981 0.977 0.948 0.938 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
11. C14A4.14 mrps-22 7966 7.662 0.959 0.961 0.920 0.961 0.990 0.958 0.959 0.954 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
12. T10B5.5 cct-7 24616 7.658 0.937 0.977 0.957 0.977 0.969 0.969 0.919 0.953 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
13. Y53C12B.3 nos-3 20231 7.656 0.943 0.967 0.951 0.967 0.957 0.976 0.940 0.955 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
14. F33D4.5 mrpl-1 5337 7.654 0.953 0.952 0.972 0.952 0.954 0.977 0.932 0.962 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
15. ZK328.2 eftu-2 7040 7.654 0.892 0.971 0.926 0.971 0.985 0.974 0.975 0.960 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
16. W08E3.3 ola-1 20885 7.653 0.956 0.962 0.944 0.962 0.982 0.960 0.926 0.961 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
17. F29C4.6 tut-1 5637 7.652 0.951 0.946 0.933 0.946 0.982 0.970 0.935 0.989 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
18. K02F2.4 ulp-5 3433 7.647 0.934 0.946 0.959 0.946 0.987 0.955 0.954 0.966 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
19. B0205.11 mrpl-9 9162 7.643 0.963 0.961 0.932 0.961 0.982 0.972 0.896 0.976 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
20. Y17G7A.1 hmg-12 29989 7.642 0.933 0.964 0.954 0.964 0.977 0.964 0.934 0.952 HMG [Source:RefSeq peptide;Acc:NP_496544]
21. W02B12.3 rsp-1 9235 7.642 0.952 0.946 0.966 0.946 0.980 0.969 0.953 0.930 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
22. C25D7.8 otub-1 7941 7.64 0.955 0.966 0.946 0.966 0.971 0.928 0.933 0.975 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
23. B0035.3 B0035.3 4118 7.637 0.895 0.950 0.966 0.950 0.980 0.950 0.973 0.973
24. C33H5.12 rsp-6 23342 7.635 0.910 0.973 0.977 0.973 0.971 0.951 0.956 0.924 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
25. F56D12.5 vig-1 42594 7.633 0.963 0.948 0.903 0.948 0.970 0.982 0.960 0.959 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
26. K08F11.3 cif-1 10218 7.633 0.970 0.953 0.936 0.953 0.967 0.977 0.932 0.945 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
27. W06H3.3 ctps-1 8363 7.63 0.967 0.943 0.962 0.943 0.966 0.984 0.919 0.946 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
28. Y46G5A.4 snrp-200 13827 7.629 0.896 0.961 0.969 0.961 0.962 0.987 0.942 0.951 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
29. K01G5.4 ran-1 32379 7.627 0.928 0.962 0.957 0.962 0.984 0.988 0.911 0.935 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
30. R144.7 larp-1 24669 7.627 0.943 0.964 0.941 0.964 0.940 0.964 0.962 0.949 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
31. T01E8.6 mrps-14 9328 7.624 0.965 0.964 0.943 0.964 0.973 0.960 0.924 0.931 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
32. F22D6.3 nars-1 18624 7.621 0.955 0.976 0.929 0.976 0.964 0.982 0.900 0.939 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
33. Y54E5A.6 Y54E5A.6 770 7.621 0.964 0.936 0.961 0.936 0.967 0.984 0.947 0.926
34. F32E10.6 cec-5 10643 7.619 0.908 0.962 0.977 0.962 0.959 0.971 0.961 0.919 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
35. B0464.7 baf-1 10161 7.618 0.965 0.948 0.898 0.948 0.984 0.969 0.958 0.948 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
36. R13F6.10 cra-1 11610 7.618 0.943 0.966 0.950 0.966 0.967 0.975 0.904 0.947 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
37. B0511.8 mrps-30 5050 7.614 0.908 0.951 0.968 0.951 0.987 0.987 0.921 0.941 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
38. Y34D9A.1 mrpl-38 5291 7.614 0.943 0.951 0.964 0.951 0.963 0.966 0.944 0.932 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
39. Y49A3A.5 cyn-1 6411 7.613 0.946 0.959 0.924 0.959 0.991 0.959 0.938 0.937 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
40. Y37E3.3 rpb-10 4051 7.613 0.962 0.943 0.950 0.943 0.979 0.974 0.908 0.954 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
41. H19N07.1 erfa-3 19869 7.613 0.958 0.973 0.967 0.973 0.955 0.959 0.893 0.935 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
42. W06E11.4 sbds-1 6701 7.611 0.954 0.967 0.941 0.967 0.941 0.969 0.954 0.918 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
43. T08B2.9 fars-1 12650 7.611 0.963 0.965 0.961 0.965 0.952 0.952 0.918 0.935 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
44. F23F1.1 nfyc-1 9983 7.609 0.922 0.969 0.957 0.969 0.950 0.965 0.934 0.943 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
45. C34E10.5 prmt-5 12277 7.606 0.943 0.966 0.966 0.966 0.963 0.971 0.909 0.922 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
46. Y50D7A.9 taco-1 5949 7.605 0.963 0.953 0.905 0.953 0.981 0.985 0.925 0.940 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
47. T23B5.1 prmt-3 10677 7.604 0.898 0.948 0.965 0.948 0.984 0.939 0.968 0.954 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
48. B0261.4 mrpl-47 8210 7.603 0.959 0.951 0.934 0.951 0.984 0.970 0.925 0.929 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
49. Y54E2A.2 smg-9 4494 7.602 0.943 0.936 0.965 0.936 0.983 0.974 0.929 0.936
50. F22B5.9 fars-3 7209 7.602 0.950 0.963 0.936 0.963 0.980 0.964 0.915 0.931 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
51. Y56A3A.17 npp-16 5391 7.601 0.908 0.946 0.959 0.946 0.944 0.973 0.973 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
52. F59E12.11 sam-4 8179 7.599 0.917 0.936 0.969 0.936 0.966 0.980 0.916 0.979
53. C46A5.9 hcf-1 6295 7.598 0.926 0.956 0.974 0.956 0.964 0.959 0.933 0.930 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
54. C13G5.2 C13G5.2 3532 7.598 0.881 0.963 0.951 0.963 0.963 0.978 0.936 0.963
55. R53.2 dtmk-1 6821 7.598 0.909 0.951 0.941 0.951 0.987 0.970 0.944 0.945 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
56. Y62E10A.11 mdt-9 5971 7.598 0.973 0.952 0.957 0.952 0.964 0.959 0.911 0.930 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
57. F42A6.7 hrp-1 28201 7.597 0.936 0.950 0.974 0.950 0.972 0.960 0.936 0.919 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
58. M88.5 zbp-1 11851 7.596 0.961 0.969 0.925 0.969 0.952 0.954 0.922 0.944 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
59. F55H2.6 clu-1 21404 7.595 0.947 0.962 0.909 0.962 0.971 0.983 0.908 0.953 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
60. Y57G11C.34 mrps-7 3450 7.595 0.960 0.955 0.949 0.955 0.974 0.941 0.950 0.911 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
61. Y38A8.3 ulp-2 7403 7.595 0.925 0.944 0.952 0.944 0.976 0.963 0.934 0.957 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
62. T25G3.4 T25G3.4 9394 7.594 0.941 0.955 0.961 0.955 0.952 0.976 0.895 0.959 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
63. K08F4.2 gtbp-1 25222 7.592 0.941 0.966 0.959 0.966 0.967 0.973 0.855 0.965 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
64. Y37E3.15 npp-13 7250 7.592 0.919 0.938 0.932 0.938 0.982 0.990 0.932 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
65. R12C12.2 ran-5 14517 7.591 0.930 0.932 0.953 0.932 0.978 0.977 0.930 0.959 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
66. T05H4.14 gad-1 7979 7.591 0.896 0.944 0.952 0.944 0.978 0.966 0.984 0.927 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
67. Y37A1B.1 lst-3 10739 7.59 0.871 0.966 0.937 0.966 0.950 0.956 0.972 0.972 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
68. W01G7.3 rpb-11 7826 7.589 0.951 0.947 0.955 0.947 0.980 0.960 0.933 0.916 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
69. T28D9.2 rsp-5 6460 7.589 0.927 0.956 0.963 0.956 0.950 0.947 0.939 0.951 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
70. Y41D4B.19 npp-8 12992 7.588 0.893 0.968 0.961 0.968 0.934 0.968 0.924 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
71. ZK550.4 ZK550.4 5815 7.588 0.921 0.938 0.940 0.938 0.987 0.961 0.947 0.956 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
72. T17E9.2 nmt-1 8017 7.588 0.955 0.970 0.954 0.970 0.949 0.942 0.914 0.934 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
73. C08F8.1 pfd-1 10199 7.587 0.974 0.965 0.941 0.965 0.956 0.959 0.905 0.922 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
74. C26D10.2 hel-1 28697 7.587 0.955 0.962 0.947 0.962 0.958 0.950 0.915 0.938 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
75. PAR2.1 mtss-1 4055 7.587 0.959 0.944 0.957 0.944 0.956 0.967 0.913 0.947 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
76. Y71G12B.9 lin-65 7476 7.586 0.890 0.969 0.959 0.969 0.950 0.985 0.909 0.955 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
77. T28D9.10 snr-3 9995 7.585 0.958 0.968 0.924 0.968 0.975 0.976 0.856 0.960 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
78. T14B4.3 T14B4.3 2875 7.582 0.979 0.918 0.961 0.918 0.970 0.949 0.948 0.939
79. K01G5.1 rnf-113 4336 7.581 0.932 0.954 0.953 0.954 0.921 0.963 0.935 0.969 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
80. T02G5.9 kars-1 9763 7.581 0.955 0.964 0.923 0.964 0.973 0.985 0.885 0.932 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
81. Y71F9B.4 snr-7 13542 7.581 0.967 0.961 0.956 0.961 0.944 0.977 0.899 0.916 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
82. Y23H5B.6 Y23H5B.6 5886 7.581 0.950 0.959 0.949 0.959 0.963 0.956 0.918 0.927
83. Y54E5A.4 npp-4 6288 7.58 0.941 0.942 0.961 0.942 0.972 0.956 0.902 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
84. C27B7.5 C27B7.5 6331 7.578 0.927 0.962 0.955 0.962 0.963 0.978 0.914 0.917
85. B0464.2 ctr-9 7610 7.578 0.832 0.956 0.943 0.956 0.961 0.984 0.966 0.980 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
86. C18E9.6 tomm-40 13426 7.576 0.957 0.967 0.954 0.967 0.956 0.957 0.940 0.878 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
87. T10F2.4 prp-19 11298 7.576 0.934 0.961 0.962 0.961 0.959 0.943 0.901 0.955 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
88. F58B3.5 mars-1 6729 7.575 0.937 0.974 0.927 0.974 0.966 0.984 0.875 0.938 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
89. Y18D10A.1 attf-6 6942 7.575 0.833 0.970 0.961 0.970 0.965 0.973 0.944 0.959 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
90. T26A5.5 jhdm-1 12698 7.575 0.890 0.954 0.952 0.954 0.953 0.970 0.963 0.939 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
91. R09B3.5 mag-1 7496 7.574 0.946 0.952 0.969 0.952 0.944 0.963 0.921 0.927 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
92. H21P03.1 mbf-1 25586 7.574 0.970 0.976 0.934 0.976 0.959 0.938 0.893 0.928 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
93. F49D11.1 prp-17 5338 7.573 0.900 0.948 0.965 0.948 0.951 0.985 0.926 0.950 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
94. M88.7 cisd-3.1 5713 7.573 0.942 0.972 0.958 0.972 0.918 0.947 0.920 0.944 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
95. D2030.8 D2030.8 2645 7.573 0.959 0.948 0.951 0.948 0.971 0.970 0.897 0.929
96. C14A4.4 crn-3 6558 7.573 0.910 0.963 0.913 0.963 0.940 0.980 0.957 0.947 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
97. C53D5.6 imb-3 28921 7.572 0.960 0.968 0.959 0.968 0.923 0.925 0.951 0.918 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
98. F58E10.3 ddx-17 15107 7.572 0.914 0.960 0.964 0.960 0.976 0.953 0.882 0.963 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
99. ZK652.1 snr-5 5993 7.571 0.964 0.955 0.953 0.955 0.964 0.959 0.900 0.921 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
100. ZK1098.7 mrps-23 2365 7.569 0.934 0.945 0.936 0.945 0.979 0.971 0.905 0.954 Probable 28S ribosomal protein S23, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34748]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA