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Results for R12C12.2

Gene ID Gene Name Reads Transcripts Annotation
R12C12.2 ran-5 14517 R12C12.2 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]

Genes with expression patterns similar to R12C12.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R12C12.2 ran-5 14517 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
2. Y54E5A.4 npp-4 6288 7.822 0.976 0.985 0.979 0.985 0.984 0.978 0.969 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
3. F41H10.4 F41H10.4 3295 7.813 0.980 0.983 0.975 0.983 0.978 0.966 0.975 0.973
4. C27B7.1 spr-2 14958 7.8 0.966 0.984 0.981 0.984 0.979 0.983 0.957 0.966 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
5. K01G5.4 ran-1 32379 7.796 0.986 0.973 0.977 0.973 0.973 0.974 0.977 0.963 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
6. T23H2.1 npp-12 12425 7.794 0.959 0.973 0.978 0.973 0.985 0.979 0.974 0.973 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
7. Y38A8.3 ulp-2 7403 7.787 0.977 0.966 0.987 0.966 0.981 0.977 0.961 0.972 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
8. B0035.3 B0035.3 4118 7.785 0.978 0.971 0.979 0.971 0.985 0.976 0.971 0.954
9. F43G9.9 cpn-1 14505 7.783 0.979 0.977 0.985 0.977 0.980 0.977 0.944 0.964 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
10. Y37E3.15 npp-13 7250 7.781 0.966 0.976 0.964 0.976 0.990 0.982 0.975 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
11. T19B4.2 npp-7 13073 7.781 0.971 0.985 0.970 0.985 0.979 0.987 0.973 0.931 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
12. F59A2.1 npp-9 34375 7.781 0.984 0.979 0.969 0.979 0.974 0.963 0.968 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
13. C02B10.5 C02B10.5 9171 7.779 0.991 0.966 0.978 0.966 0.981 0.976 0.963 0.958
14. ZK1010.3 frg-1 3533 7.776 0.968 0.980 0.981 0.980 0.984 0.968 0.940 0.975 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
15. Y17G7A.1 hmg-12 29989 7.774 0.989 0.971 0.980 0.971 0.985 0.953 0.960 0.965 HMG [Source:RefSeq peptide;Acc:NP_496544]
16. F52C9.7 mog-3 9880 7.774 0.984 0.975 0.984 0.975 0.977 0.986 0.976 0.917 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
17. K08E7.1 eak-7 18960 7.774 0.975 0.982 0.969 0.982 0.990 0.953 0.967 0.956 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
18. T05H4.14 gad-1 7979 7.773 0.976 0.974 0.977 0.974 0.984 0.983 0.949 0.956 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
19. R07E5.14 rnp-4 11659 7.772 0.983 0.986 0.976 0.986 0.980 0.955 0.942 0.964 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
20. ZK686.4 snu-23 9040 7.769 0.977 0.970 0.977 0.970 0.980 0.986 0.963 0.946 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
21. F23F1.1 nfyc-1 9983 7.769 0.974 0.978 0.994 0.978 0.960 0.951 0.968 0.966 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
22. F59E12.11 sam-4 8179 7.768 0.963 0.988 0.977 0.988 0.977 0.968 0.947 0.960
23. Y56A3A.17 npp-16 5391 7.765 0.985 0.971 0.970 0.971 0.958 0.968 0.960 0.982 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
24. F44B9.7 mdt-30 3651 7.763 0.972 0.981 0.976 0.981 0.977 0.973 0.961 0.942 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
25. W03G1.6 pig-1 5015 7.762 0.941 0.983 0.980 0.983 0.985 0.969 0.948 0.973 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
26. Y71G12B.9 lin-65 7476 7.76 0.972 0.970 0.977 0.970 0.968 0.981 0.968 0.954 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
27. T22C1.3 T22C1.3 2305 7.76 0.989 0.975 0.990 0.975 0.969 0.943 0.954 0.965
28. F53F4.3 tbcb-1 6442 7.759 0.976 0.974 0.974 0.974 0.973 0.978 0.971 0.939 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
29. C25D7.8 otub-1 7941 7.758 0.981 0.971 0.978 0.971 0.989 0.938 0.966 0.964 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
30. ZK742.1 xpo-1 20741 7.757 0.960 0.979 0.981 0.979 0.984 0.964 0.962 0.948 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
31. Y116A8C.42 snr-1 17062 7.753 0.962 0.963 0.974 0.963 0.984 0.956 0.968 0.983 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
32. F32H2.4 thoc-3 3861 7.751 0.956 0.983 0.985 0.983 0.960 0.976 0.945 0.963 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
33. C05C8.6 hpo-9 8263 7.751 0.976 0.973 0.967 0.973 0.981 0.965 0.961 0.955
34. T19C3.8 fem-2 9225 7.75 0.975 0.981 0.978 0.981 0.982 0.962 0.943 0.948 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
35. Y53C12B.3 nos-3 20231 7.748 0.967 0.972 0.976 0.972 0.986 0.950 0.981 0.944 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
36. Y41D4B.19 npp-8 12992 7.744 0.972 0.969 0.984 0.969 0.967 0.981 0.979 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
37. F28H1.3 aars-2 13537 7.744 0.971 0.964 0.956 0.964 0.985 0.969 0.955 0.980 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
38. C08B11.5 sap-49 10553 7.738 0.979 0.984 0.956 0.984 0.969 0.963 0.969 0.934 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
39. K11D12.2 pqn-51 15951 7.738 0.978 0.988 0.977 0.988 0.980 0.953 0.943 0.931 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
40. Y39G10AR.7 ekl-7 7072 7.737 0.956 0.975 0.979 0.975 0.973 0.960 0.949 0.970
41. F56C9.6 F56C9.6 4303 7.737 0.973 0.969 0.981 0.969 0.961 0.970 0.943 0.971
42. Y46G5A.4 snrp-200 13827 7.736 0.942 0.968 0.980 0.968 0.965 0.973 0.972 0.968 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
43. F08B4.5 pole-2 8234 7.736 0.967 0.985 0.985 0.985 0.975 0.958 0.936 0.945 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
44. Y34D9A.1 mrpl-38 5291 7.735 0.978 0.971 0.960 0.971 0.949 0.966 0.969 0.971 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
45. C52E4.6 cyl-1 6405 7.735 0.980 0.973 0.955 0.973 0.960 0.960 0.957 0.977 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
46. Y37D8A.9 mrg-1 14369 7.733 0.976 0.973 0.968 0.973 0.974 0.963 0.965 0.941 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
47. K06A5.7 cdc-25.1 14961 7.731 0.924 0.978 0.974 0.978 0.974 0.974 0.976 0.953 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
48. Y43F4B.4 npp-18 4780 7.729 0.974 0.991 0.949 0.991 0.953 0.967 0.971 0.933 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
49. W02B12.3 rsp-1 9235 7.727 0.986 0.964 0.987 0.964 0.957 0.962 0.933 0.974 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
50. F33D4.5 mrpl-1 5337 7.725 0.943 0.977 0.960 0.977 0.966 0.987 0.963 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
51. Y46G5A.5 pisy-1 13040 7.724 0.960 0.966 0.960 0.966 0.979 0.958 0.971 0.964 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
52. T06A10.4 lsy-13 7631 7.723 0.951 0.969 0.972 0.969 0.979 0.970 0.966 0.947
53. E01A2.4 let-504 9788 7.722 0.961 0.981 0.973 0.981 0.972 0.937 0.977 0.940
54. F32H2.1 snpc-4 7581 7.722 0.968 0.971 0.967 0.971 0.985 0.966 0.974 0.920 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
55. Y65B4BL.2 deps-1 18277 7.722 0.963 0.969 0.988 0.969 0.974 0.966 0.931 0.962
56. C06A5.1 inst-1 5068 7.72 0.977 0.961 0.972 0.961 0.935 0.993 0.960 0.961 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
57. F31E3.3 rfc-4 3828 7.72 0.960 0.983 0.985 0.983 0.950 0.959 0.976 0.924 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
58. F56D2.6 ddx-15 12282 7.718 0.941 0.967 0.974 0.967 0.986 0.965 0.964 0.954 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
59. ZK328.2 eftu-2 7040 7.716 0.941 0.972 0.973 0.972 0.975 0.974 0.960 0.949 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
60. F32E10.6 cec-5 10643 7.716 0.975 0.955 0.970 0.955 0.977 0.973 0.955 0.956 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
61. F42A6.7 hrp-1 28201 7.716 0.984 0.972 0.976 0.972 0.975 0.941 0.971 0.925 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
62. C33H5.15 sgo-1 3674 7.715 0.952 0.974 0.962 0.974 0.964 0.950 0.972 0.967 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
63. F56F3.1 ifet-1 25772 7.713 0.961 0.957 0.963 0.957 0.977 0.972 0.974 0.952 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
64. C35D10.9 ced-4 3446 7.711 0.969 0.971 0.960 0.971 0.966 0.961 0.982 0.931 Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
65. F36A2.1 cids-2 4551 7.71 0.958 0.971 0.969 0.971 0.956 0.968 0.963 0.954 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
66. W02F12.6 sna-1 7338 7.709 0.984 0.974 0.965 0.974 0.980 0.948 0.962 0.922 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
67. C26E6.7 eri-9 8069 7.708 0.978 0.989 0.961 0.989 0.943 0.967 0.962 0.919 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
68. Y54H5A.3 tag-262 4269 7.707 0.984 0.976 0.941 0.976 0.963 0.966 0.964 0.937
69. T04A8.14 emb-5 11746 7.705 0.970 0.987 0.984 0.987 0.967 0.953 0.918 0.939 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
70. K02F3.11 rnp-5 6205 7.705 0.969 0.976 0.981 0.976 0.942 0.971 0.935 0.955 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
71. H17B01.4 emc-1 9037 7.704 0.952 0.975 0.957 0.975 0.990 0.953 0.940 0.962 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
72. F58D5.1 hrp-2 17211 7.703 0.982 0.945 0.944 0.945 0.982 0.976 0.974 0.955 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
73. Y106G6H.15 ska-1 2362 7.703 0.950 0.984 0.961 0.984 0.949 0.964 0.940 0.971 Spindle and kinetochore-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWS0]
74. Y62E10A.11 mdt-9 5971 7.703 0.959 0.974 0.976 0.974 0.973 0.944 0.968 0.935 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
75. ZK863.6 dpy-30 16177 7.702 0.965 0.976 0.969 0.976 0.975 0.946 0.926 0.969 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
76. T10F2.4 prp-19 11298 7.702 0.986 0.968 0.982 0.968 0.966 0.959 0.944 0.929 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
77. Y54E2A.3 tac-1 6308 7.702 0.969 0.964 0.960 0.964 0.964 0.962 0.956 0.963 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
78. ZK507.6 cya-1 6807 7.701 0.962 0.989 0.951 0.989 0.941 0.974 0.941 0.954 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
79. ZK353.1 cyy-1 5745 7.7 0.965 0.969 0.938 0.969 0.983 0.983 0.946 0.947 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
80. T12E12.2 cec-6 4758 7.7 0.914 0.962 0.987 0.962 0.970 0.967 0.968 0.970 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
81. R53.2 dtmk-1 6821 7.699 0.949 0.969 0.979 0.969 0.976 0.965 0.949 0.943 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
82. EEED8.1 tofu-6 3962 7.699 0.983 0.981 0.966 0.981 0.975 0.948 0.956 0.909 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
83. Y53C10A.12 hsf-1 7899 7.697 0.967 0.981 0.973 0.981 0.967 0.979 0.955 0.894 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
84. F58E10.3 ddx-17 15107 7.697 0.983 0.953 0.972 0.953 0.962 0.952 0.952 0.970 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
85. T23B5.1 prmt-3 10677 7.696 0.969 0.982 0.988 0.982 0.978 0.903 0.970 0.924 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
86. F10E9.8 sas-4 3703 7.696 0.957 0.972 0.966 0.972 0.949 0.946 0.977 0.957 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
87. T18H9.6 mdt-27 5418 7.694 0.939 0.978 0.979 0.978 0.981 0.970 0.946 0.923 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
88. F30F8.3 gras-1 5902 7.693 0.935 0.977 0.944 0.977 0.991 0.984 0.937 0.948 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
89. C37A2.2 pqn-20 10913 7.693 0.965 0.973 0.959 0.973 0.980 0.971 0.962 0.910 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
90. F32A5.7 lsm-4 3785 7.69 0.977 0.974 0.970 0.974 0.968 0.949 0.962 0.916 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
91. F22D6.3 nars-1 18624 7.69 0.973 0.968 0.962 0.968 0.966 0.979 0.920 0.954 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
92. ZK1251.9 dcaf-1 10926 7.689 0.966 0.965 0.966 0.965 0.969 0.966 0.964 0.928 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
93. Y116A8C.34 cyn-13 2972 7.689 0.981 0.959 0.959 0.959 0.934 0.966 0.957 0.974 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
94. F55G1.8 plk-3 12036 7.689 0.959 0.978 0.980 0.978 0.965 0.949 0.967 0.913 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
95. C26E6.4 rpb-2 7053 7.688 0.936 0.968 0.970 0.968 0.977 0.976 0.965 0.928 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
96. B0464.9 B0464.9 2997 7.687 0.947 0.985 0.961 0.985 0.950 0.964 0.932 0.963 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
97. C28H8.9 dpff-1 8684 7.684 0.984 0.973 0.966 0.973 0.948 0.964 0.905 0.971 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
98. T09A5.8 cec-3 5813 7.682 0.929 0.986 0.953 0.986 0.982 0.946 0.957 0.943 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
99. F43G9.5 cfim-1 9169 7.682 0.983 0.992 0.981 0.992 0.953 0.942 0.898 0.941 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
100. F25B3.6 rtfo-1 11965 7.682 0.928 0.976 0.946 0.976 0.979 0.983 0.980 0.914 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA