C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y71H2AM.23

Gene ID Gene Name Reads Transcripts Annotation
Y71H2AM.23 tufm-1 16206 Y71H2AM.23.1, Y71H2AM.23.2 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_497623]

Genes with expression patterns similar to Y71H2AM.23

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y71H2AM.23 tufm-1 16206 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_497623]
2. Y22D7AL.5 hsp-60 42542 7.762 0.973 0.960 0.946 0.960 0.984 0.985 0.980 0.974 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
3. F55H2.6 clu-1 21404 7.744 0.954 0.953 0.964 0.953 0.974 0.992 0.976 0.978 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
4. Y37E3.9 phb-1 29211 7.721 0.918 0.972 0.979 0.972 0.985 0.967 0.952 0.976 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
5. Y18D10A.19 fkb-2 48128 7.714 0.960 0.968 0.936 0.968 0.985 0.976 0.949 0.972 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
6. F29C12.4 gfm-1 8964 7.706 0.920 0.973 0.963 0.973 0.984 0.958 0.972 0.963 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
7. F56D12.5 vig-1 42594 7.688 0.942 0.956 0.932 0.956 0.979 0.982 0.969 0.972 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
8. T21C9.12 scpl-4 14723 7.687 0.938 0.959 0.966 0.959 0.977 0.983 0.972 0.933 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
9. K08F11.3 cif-1 10218 7.683 0.931 0.961 0.934 0.961 0.986 0.978 0.951 0.981 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
10. C37H5.8 hsp-6 22718 7.674 0.955 0.959 0.982 0.959 0.967 0.981 0.917 0.954 Heat shock 70 kDa protein F, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P11141]
11. T07A9.9 nog-1 19728 7.671 0.945 0.952 0.931 0.952 0.984 0.969 0.964 0.974 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
12. W08E3.3 ola-1 20885 7.667 0.952 0.950 0.928 0.950 0.985 0.955 0.978 0.969 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
13. R144.7 larp-1 24669 7.665 0.955 0.946 0.936 0.946 0.975 0.982 0.949 0.976 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
14. F17C11.9 eef-1G 37911 7.653 0.931 0.950 0.958 0.950 0.985 0.965 0.948 0.966 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
15. B0464.1 dars-1 12331 7.648 0.942 0.955 0.965 0.955 0.980 0.964 0.934 0.953 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
16. T24H7.1 phb-2 28775 7.648 0.933 0.931 0.955 0.931 0.991 0.978 0.947 0.982 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
17. T10B5.5 cct-7 24616 7.641 0.948 0.954 0.894 0.954 0.985 0.984 0.942 0.980 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
18. C34E10.11 mrps-26 4649 7.633 0.920 0.964 0.955 0.964 0.953 0.978 0.930 0.969 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
19. C25A1.10 dao-5 18351 7.633 0.959 0.961 0.961 0.961 0.949 0.966 0.903 0.973 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
20. F25H2.11 tct-1 41796 7.631 0.921 0.961 0.945 0.961 0.986 0.963 0.947 0.947 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
21. F58D5.1 hrp-2 17211 7.63 0.905 0.939 0.935 0.939 0.979 0.990 0.976 0.967 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
22. C34E10.5 prmt-5 12277 7.62 0.930 0.957 0.915 0.957 0.961 0.973 0.968 0.959 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
23. C56C10.8 icd-1 89788 7.618 0.938 0.928 0.949 0.928 0.978 0.980 0.941 0.976 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
24. C01G8.6 hpo-32 7439 7.617 0.957 0.946 0.960 0.946 0.955 0.945 0.953 0.955
25. H20J04.5 pfd-2 8082 7.616 0.945 0.912 0.951 0.912 0.985 0.980 0.964 0.967 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
26. F25H5.4 eef-2 34846 7.615 0.914 0.951 0.949 0.951 0.980 0.965 0.924 0.981 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
27. K04D7.2 mspn-1 48187 7.603 0.932 0.946 0.942 0.946 0.974 0.955 0.950 0.958 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
28. C26E6.4 rpb-2 7053 7.602 0.941 0.924 0.891 0.924 0.987 0.985 0.982 0.968 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
29. JC8.3 rpl-12 52728 7.597 0.925 0.942 0.964 0.942 0.978 0.940 0.945 0.961 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
30. C16A3.3 let-716 8448 7.596 0.931 0.960 0.943 0.960 0.924 0.964 0.954 0.960
31. Y18D10A.25 fkb-8 8968 7.594 0.925 0.963 0.921 0.963 0.973 0.964 0.942 0.943 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
32. T21G5.3 glh-1 16470 7.591 0.949 0.935 0.917 0.935 0.978 0.962 0.968 0.947 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
33. R13F6.10 cra-1 11610 7.589 0.943 0.911 0.942 0.911 0.985 0.987 0.945 0.965 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
34. F53G2.7 mnat-1 10966 7.589 0.971 0.938 0.956 0.938 0.967 0.982 0.897 0.940 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
35. F22B5.9 fars-3 7209 7.587 0.899 0.948 0.934 0.948 0.977 0.960 0.952 0.969 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
36. T16G1.11 eif-3.K 14014 7.586 0.905 0.929 0.932 0.929 0.977 0.984 0.958 0.972 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
37. K04D7.1 rack-1 48949 7.58 0.922 0.946 0.956 0.946 0.966 0.943 0.949 0.952 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
38. Y50D7A.9 taco-1 5949 7.579 0.905 0.941 0.943 0.941 0.958 0.972 0.949 0.970 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
39. T03D8.2 mrps-12 8253 7.577 0.913 0.932 0.944 0.932 0.965 0.986 0.923 0.982 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
40. E04A4.4 hoe-1 3659 7.574 0.928 0.963 0.921 0.963 0.977 0.940 0.951 0.931 Ribonuclease Z [Source:UniProtKB/Swiss-Prot;Acc:O44476]
41. C26D10.2 hel-1 28697 7.574 0.940 0.930 0.918 0.930 0.976 0.975 0.933 0.972 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
42. F26F4.10 rars-1 9971 7.572 0.917 0.948 0.930 0.948 0.970 0.960 0.943 0.956 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
43. C06A1.5 rpb-6 7515 7.571 0.912 0.953 0.913 0.953 0.970 0.960 0.953 0.957 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
44. F56D2.6 ddx-15 12282 7.568 0.924 0.923 0.869 0.923 0.979 0.993 0.971 0.986 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
45. K08F4.2 gtbp-1 25222 7.566 0.924 0.940 0.926 0.940 0.976 0.973 0.900 0.987 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
46. T02G5.9 kars-1 9763 7.565 0.861 0.953 0.958 0.953 0.978 0.981 0.914 0.967 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
47. F59A2.3 cri-3 15077 7.563 0.916 0.970 0.938 0.970 0.940 0.977 0.879 0.973 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
48. T05E11.1 rps-5 79298 7.562 0.937 0.931 0.939 0.931 0.979 0.953 0.943 0.949 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
49. Y116A8A.9 map-2 5122 7.562 0.933 0.941 0.883 0.941 0.972 0.973 0.950 0.969 Methionine aminopeptidase 2 [Source:RefSeq peptide;Acc:NP_001255907]
50. R74.1 lars-1 8467 7.561 0.905 0.951 0.948 0.951 0.970 0.925 0.946 0.965 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
51. H19N07.1 erfa-3 19869 7.56 0.934 0.942 0.931 0.942 0.979 0.974 0.910 0.948 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
52. C15H11.9 rrbs-1 9177 7.559 0.943 0.941 0.951 0.941 0.938 0.941 0.938 0.966 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
53. Y47G6A.10 spg-7 6551 7.558 0.918 0.933 0.962 0.933 0.978 0.963 0.979 0.892 human SPG (spastic paraplegia) [Source:RefSeq peptide;Acc:NP_491165]
54. F53A3.3 rps-22 81093 7.557 0.949 0.926 0.937 0.926 0.978 0.951 0.943 0.947 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
55. D2013.7 eif-3.F 21004 7.557 0.922 0.953 0.960 0.953 0.972 0.953 0.876 0.968 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
56. ZC434.5 ears-1 4725 7.556 0.919 0.935 0.932 0.935 0.961 0.986 0.929 0.959 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
57. K07A12.7 mrps-15 6325 7.556 0.930 0.927 0.938 0.927 0.963 0.976 0.936 0.959 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
58. C18E9.6 tomm-40 13426 7.553 0.905 0.942 0.942 0.942 0.976 0.968 0.940 0.938 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
59. C32E8.2 rpl-13 70096 7.551 0.935 0.929 0.949 0.929 0.971 0.959 0.931 0.948 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
60. D2096.8 nap-1 59459 7.55 0.941 0.945 0.957 0.945 0.946 0.968 0.877 0.971 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
61. F56F3.5 rps-1 85503 7.549 0.937 0.933 0.943 0.933 0.973 0.965 0.942 0.923 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
62. F54A3.3 cct-3 25183 7.546 0.934 0.938 0.956 0.938 0.964 0.960 0.911 0.945 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
63. F58B3.5 mars-1 6729 7.544 0.896 0.941 0.947 0.941 0.956 0.978 0.938 0.947 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
64. C14A4.14 mrps-22 7966 7.544 0.925 0.933 0.933 0.933 0.952 0.945 0.947 0.976 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
65. F21H12.5 fbf-2 4640 7.543 0.910 0.937 0.952 0.937 0.954 0.941 0.972 0.940 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
66. T21B10.1 mrpl-50 14595 7.543 0.932 0.949 0.938 0.949 0.934 0.980 0.907 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
67. T01E8.6 mrps-14 9328 7.543 0.879 0.940 0.932 0.940 0.972 0.956 0.955 0.969 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
68. M88.5 zbp-1 11851 7.542 0.921 0.931 0.932 0.931 0.965 0.947 0.947 0.968 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
69. T01C3.7 fib-1 23572 7.54 0.957 0.957 0.918 0.957 0.946 0.958 0.923 0.924 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
70. C03D6.8 rpl-24.2 5932 7.54 0.952 0.914 0.937 0.914 0.962 0.966 0.927 0.968 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
71. Y37E3.7 rla-1 55876 7.539 0.917 0.921 0.924 0.921 0.988 0.959 0.955 0.954 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
72. Y116A8C.42 snr-1 17062 7.539 0.935 0.921 0.906 0.921 0.957 0.981 0.945 0.973 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
73. Y113G7B.17 prmt-1 43709 7.538 0.952 0.943 0.930 0.943 0.944 0.949 0.923 0.954 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
74. ZK652.4 rpl-35 89991 7.537 0.934 0.929 0.920 0.929 0.963 0.959 0.947 0.956 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
75. Y65B4BR.5 icd-2 58321 7.536 0.925 0.924 0.926 0.924 0.963 0.973 0.946 0.955 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
76. T13H5.5 mrps-18B 3430 7.536 0.913 0.943 0.944 0.943 0.933 0.985 0.911 0.964 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
77. C09D4.5 rpl-19 56944 7.535 0.937 0.919 0.937 0.919 0.973 0.967 0.937 0.946 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
78. W01B11.3 nol-5 23544 7.534 0.946 0.953 0.961 0.953 0.955 0.912 0.919 0.935 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
79. D1007.12 rpl-24.1 73724 7.534 0.941 0.918 0.949 0.918 0.975 0.961 0.956 0.916 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
80. W07E6.1 nol-1 7892 7.534 0.896 0.940 0.963 0.940 0.928 0.961 0.959 0.947 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
81. T05F1.3 rps-19 88407 7.533 0.947 0.912 0.945 0.912 0.983 0.955 0.942 0.937 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
82. Y75B12B.2 cyn-7 98281 7.532 0.934 0.957 0.957 0.957 0.922 0.931 0.889 0.985 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
83. F26D10.3 hsp-1 98277 7.532 0.960 0.955 0.904 0.955 0.914 0.965 0.908 0.971 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
84. K07F5.15 K07F5.15 10171 7.531 0.948 0.950 0.894 0.950 0.920 0.963 0.964 0.942
85. B0261.4 mrpl-47 8210 7.531 0.938 0.902 0.904 0.902 0.978 0.986 0.943 0.978 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
86. W06H3.3 ctps-1 8363 7.529 0.905 0.921 0.926 0.921 0.954 0.977 0.953 0.972 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
87. F10G7.1 tag-151 9031 7.527 0.928 0.944 0.952 0.944 0.960 0.976 0.906 0.917 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
88. F28H1.3 aars-2 13537 7.526 0.898 0.921 0.889 0.921 0.986 0.979 0.958 0.974 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
89. F09F7.3 rpc-2 9751 7.526 0.954 0.936 0.920 0.936 0.946 0.958 0.936 0.940 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
90. C53D5.6 imb-3 28921 7.524 0.925 0.935 0.933 0.935 0.957 0.943 0.952 0.944 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
91. T19A6.2 ngp-1 5884 7.523 0.934 0.941 0.905 0.941 0.970 0.980 0.889 0.963 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
92. T12D8.2 drr-2 16208 7.522 0.941 0.955 0.939 0.955 0.945 0.951 0.905 0.931 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
93. F42A10.1 abcf-3 5557 7.522 0.938 0.911 0.943 0.911 0.970 0.957 0.939 0.953 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
94. T06A10.1 mel-46 4407 7.521 0.962 0.934 0.923 0.934 0.933 0.961 0.899 0.975 MEL-46; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED26]
95. ZK1058.4 ccdc-47 8879 7.517 0.852 0.938 0.902 0.938 0.979 0.970 0.964 0.974 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
96. B0336.9 swp-1 52442 7.516 0.931 0.915 0.938 0.915 0.976 0.965 0.939 0.937 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
97. Y46G5A.4 snrp-200 13827 7.513 0.907 0.903 0.888 0.903 0.977 0.989 0.977 0.969 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
98. T28D9.10 snr-3 9995 7.511 0.900 0.925 0.937 0.925 0.964 0.967 0.912 0.981 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
99. C27H5.3 fust-1 6978 7.511 0.897 0.906 0.949 0.906 0.982 0.984 0.920 0.967 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
100. Y43B11AR.4 rps-4 76546 7.51 0.924 0.916 0.947 0.916 0.973 0.963 0.942 0.929 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]

There are 1492 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA