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Results for Y48B6A.3

Gene ID Gene Name Reads Transcripts Annotation
Y48B6A.3 xrn-2 4881 Y48B6A.3 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]

Genes with expression patterns similar to Y48B6A.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48B6A.3 xrn-2 4881 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
2. D2096.8 nap-1 59459 7.791 0.966 0.966 0.974 0.966 0.989 0.955 0.990 0.985 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
3. C15H11.9 rrbs-1 9177 7.786 0.958 0.967 0.978 0.967 0.981 0.981 0.974 0.980 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
4. C25A1.10 dao-5 18351 7.762 0.955 0.966 0.964 0.966 0.988 0.974 0.967 0.982 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
5. T01C3.7 fib-1 23572 7.743 0.975 0.955 0.962 0.955 0.992 0.942 0.984 0.978 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
6. R13A5.12 lpd-7 10476 7.739 0.966 0.955 0.966 0.955 0.962 0.989 0.968 0.978 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
7. Y113G7B.17 prmt-1 43709 7.727 0.949 0.965 0.965 0.965 0.992 0.931 0.975 0.985 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
8. F10G7.1 tag-151 9031 7.707 0.968 0.955 0.973 0.955 0.981 0.966 0.951 0.958 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
9. Y71G12B.8 ddx-27 3584 7.683 0.945 0.966 0.924 0.966 0.971 0.961 0.976 0.974 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
10. T03D8.2 mrps-12 8253 7.674 0.966 0.957 0.969 0.957 0.977 0.940 0.974 0.934 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
11. C16A3.3 let-716 8448 7.672 0.905 0.959 0.966 0.959 0.993 0.965 0.948 0.977
12. T23G11.3 gld-1 41748 7.671 0.960 0.940 0.941 0.940 0.971 0.972 0.980 0.967 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
13. K09H9.6 lpd-6 5459 7.666 0.962 0.964 0.919 0.964 0.990 0.981 0.964 0.922 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
14. D2023.5 mpst-1 10328 7.66 0.947 0.942 0.956 0.942 0.948 0.968 0.983 0.974 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
15. B0513.2 B0513.2 3641 7.649 0.927 0.931 0.951 0.931 0.976 0.990 0.977 0.966
16. F13G3.11 mrpl-13 6024 7.647 0.939 0.963 0.962 0.963 0.952 0.973 0.956 0.939 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
17. Y54H5A.2 Y54H5A.2 2168 7.646 0.964 0.903 0.968 0.903 0.985 0.983 0.965 0.975
18. Y54E5A.6 Y54E5A.6 770 7.643 0.958 0.936 0.955 0.936 0.973 0.965 0.936 0.984
19. T28D9.10 snr-3 9995 7.642 0.939 0.939 0.978 0.939 0.955 0.982 0.965 0.945 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
20. Y111B2A.17 elpc-2 3504 7.641 0.960 0.940 0.946 0.940 0.981 0.970 0.951 0.953 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
21. K08F4.2 gtbp-1 25222 7.64 0.959 0.939 0.932 0.939 0.958 0.972 0.979 0.962 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
22. F55H2.6 clu-1 21404 7.624 0.969 0.956 0.949 0.956 0.960 0.957 0.950 0.927 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
23. C07E3.2 pro-2 4193 7.624 0.903 0.952 0.924 0.952 0.979 0.975 0.977 0.962 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
24. F59A2.3 cri-3 15077 7.621 0.958 0.947 0.962 0.947 0.918 0.977 0.964 0.948 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
25. F09F7.3 rpc-2 9751 7.621 0.948 0.942 0.944 0.942 0.987 0.981 0.960 0.917 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
26. C03D6.8 rpl-24.2 5932 7.618 0.979 0.935 0.894 0.935 0.948 0.981 0.978 0.968 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
27. T23F6.4 rbd-1 5825 7.617 0.899 0.963 0.943 0.963 0.972 0.970 0.928 0.979 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
28. C06A1.5 rpb-6 7515 7.615 0.930 0.939 0.945 0.939 0.942 0.978 0.958 0.984 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
29. C14A4.14 mrps-22 7966 7.613 0.971 0.946 0.951 0.946 0.918 0.973 0.940 0.968 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
30. W01B11.3 nol-5 23544 7.612 0.921 0.950 0.979 0.950 0.980 0.878 0.986 0.968 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
31. Y116A8C.42 snr-1 17062 7.609 0.971 0.933 0.940 0.933 0.965 0.954 0.971 0.942 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
32. ZK856.10 rpc-25 3282 7.609 0.908 0.914 0.973 0.914 0.977 0.981 0.962 0.980 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
33. K01G5.8 K01G5.8 4694 7.609 0.980 0.890 0.955 0.890 0.958 0.981 0.989 0.966
34. T21G5.3 glh-1 16470 7.608 0.955 0.969 0.990 0.969 0.947 0.922 0.921 0.935 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
35. Y53C12B.3 nos-3 20231 7.596 0.954 0.946 0.926 0.946 0.959 0.932 0.955 0.978 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
36. ZK945.3 puf-12 6266 7.587 0.830 0.954 0.948 0.954 0.989 0.980 0.960 0.972 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
37. T19A6.2 ngp-1 5884 7.586 0.957 0.944 0.924 0.944 0.962 0.931 0.961 0.963 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
38. F56D12.5 vig-1 42594 7.585 0.962 0.972 0.977 0.972 0.924 0.927 0.914 0.937 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
39. T24H7.1 phb-2 28775 7.584 0.962 0.946 0.968 0.946 0.928 0.949 0.968 0.917 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
40. C27H6.2 ruvb-1 6291 7.579 0.943 0.962 0.923 0.962 0.952 0.957 0.953 0.927 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
41. F55A12.8 nath-10 4253 7.577 0.884 0.921 0.944 0.921 0.985 0.987 0.975 0.960 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
42. T21B10.7 cct-2 13999 7.576 0.944 0.962 0.927 0.962 0.962 0.956 0.937 0.926 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
43. Y14H12B.2 Y14H12B.2 6496 7.575 0.903 0.920 0.894 0.920 0.990 0.987 0.974 0.987
44. F41G3.14 exos-8 2300 7.574 0.945 0.936 0.868 0.936 0.974 0.965 0.969 0.981 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
45. Y23H5B.6 Y23H5B.6 5886 7.574 0.938 0.948 0.890 0.948 0.974 0.968 0.938 0.970
46. Y50D7A.9 taco-1 5949 7.573 0.944 0.930 0.968 0.930 0.941 0.939 0.956 0.965 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
47. W07E6.1 nol-1 7892 7.57 0.892 0.924 0.948 0.924 0.988 0.966 0.951 0.977 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
48. K12H4.4 K12H4.4 8351 7.57 0.928 0.923 0.894 0.923 0.970 0.981 0.980 0.971 Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
49. Y53C12B.2 Y53C12B.2 6115 7.566 0.960 0.926 0.919 0.926 0.983 0.970 0.972 0.910 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
50. Y18D10A.17 car-1 87364 7.566 0.935 0.948 0.915 0.948 0.950 0.957 0.962 0.951 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
51. Y37D8A.11 cec-7 8801 7.565 0.937 0.933 0.926 0.933 0.980 0.978 0.981 0.897 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
52. Y18D10A.19 fkb-2 48128 7.563 0.982 0.974 0.984 0.974 0.919 0.906 0.897 0.927 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
53. Y71F9B.4 snr-7 13542 7.56 0.955 0.927 0.919 0.927 0.967 0.966 0.924 0.975 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
54. C01G8.6 hpo-32 7439 7.558 0.943 0.924 0.948 0.924 0.945 0.974 0.961 0.939
55. T21B10.1 mrpl-50 14595 7.558 0.951 0.955 0.964 0.955 0.921 0.961 0.952 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
56. B0035.12 sart-3 7188 7.557 0.958 0.918 0.933 0.918 0.977 0.964 0.962 0.927 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
57. C34E10.11 mrps-26 4649 7.556 0.944 0.956 0.964 0.956 0.970 0.927 0.913 0.926 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
58. Y40G12A.1 ubh-3 4142 7.555 0.923 0.925 0.961 0.925 0.928 0.962 0.954 0.977 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
59. F56D1.3 mrps-16 2309 7.554 0.951 0.925 0.934 0.925 0.970 0.987 0.926 0.936 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
60. W06H3.3 ctps-1 8363 7.551 0.934 0.939 0.925 0.939 0.948 0.959 0.929 0.978 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
61. W08E3.1 snr-2 14849 7.55 0.921 0.939 0.939 0.939 0.905 0.962 0.957 0.988 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
62. F21C3.4 rde-2 6286 7.549 0.951 0.897 0.925 0.897 0.963 0.986 0.970 0.960
63. Y92H12BR.8 mrpl-15 6344 7.549 0.967 0.919 0.939 0.919 0.955 0.954 0.933 0.963 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
64. C26E6.4 rpb-2 7053 7.548 0.945 0.944 0.950 0.944 0.937 0.952 0.918 0.958 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
65. T25G3.4 T25G3.4 9394 7.547 0.956 0.920 0.945 0.920 0.982 0.947 0.976 0.901 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
66. C34E10.2 gop-2 5684 7.547 0.916 0.927 0.911 0.927 0.974 0.987 0.933 0.972 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
67. C14A4.1 dohh-1 4890 7.546 0.934 0.912 0.955 0.912 0.965 0.988 0.932 0.948 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
68. F28D1.1 wdr-46 4050 7.545 0.913 0.929 0.915 0.929 0.989 0.962 0.962 0.946 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
69. C27H6.3 tofu-1 2992 7.545 0.946 0.911 0.960 0.911 0.974 0.968 0.960 0.915 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
70. F14B4.3 rpoa-2 7549 7.543 0.890 0.924 0.891 0.924 0.985 0.977 0.978 0.974 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
71. F53A2.4 nud-1 7818 7.54 0.932 0.917 0.921 0.917 0.971 0.992 0.959 0.931 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
72. F53F4.12 F53F4.12 2683 7.536 0.951 0.879 0.934 0.879 0.967 0.993 0.958 0.975
73. F41H10.10 htp-1 6425 7.536 0.959 0.935 0.974 0.935 0.967 0.929 0.971 0.866 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
74. C26D10.1 ran-3 11111 7.531 0.867 0.947 0.956 0.947 0.917 0.967 0.965 0.965 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
75. C05D11.10 mrps-17 4613 7.53 0.919 0.929 0.951 0.929 0.929 0.963 0.940 0.970 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
76. Y48C3A.7 mac-1 2197 7.53 0.879 0.958 0.882 0.958 0.974 0.983 0.947 0.949 Member of AAA family binding CED-4 [Source:RefSeq peptide;Acc:NP_496814]
77. F59A2.1 npp-9 34375 7.528 0.914 0.905 0.917 0.905 0.984 0.978 0.973 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
78. H43I07.2 rpac-40 3342 7.527 0.913 0.917 0.905 0.917 0.946 0.984 0.985 0.960 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
79. Y39B6A.35 tgt-2 2364 7.526 0.922 0.924 0.905 0.924 0.950 0.970 0.946 0.985 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
80. Y47D3A.26 smc-3 6256 7.526 0.879 0.951 0.905 0.951 0.966 0.972 0.951 0.951 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
81. K04C2.3 K04C2.3 23540 7.525 0.946 0.863 0.952 0.863 0.975 0.981 0.957 0.988
82. Y73B6BL.32 lsm-8 11002 7.524 0.938 0.945 0.957 0.945 0.963 0.900 0.929 0.947 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
83. C56C10.8 icd-1 89788 7.523 0.932 0.970 0.968 0.970 0.922 0.891 0.956 0.914 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
84. C01F6.8 icln-1 6586 7.522 0.923 0.929 0.920 0.929 0.963 0.956 0.984 0.918 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
85. T28D9.2 rsp-5 6460 7.521 0.906 0.945 0.898 0.945 0.962 0.977 0.944 0.944 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
86. C05C8.5 C05C8.5 2655 7.516 0.928 0.879 0.937 0.879 0.984 0.983 0.934 0.992
87. B0261.4 mrpl-47 8210 7.515 0.969 0.935 0.953 0.935 0.909 0.928 0.933 0.953 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
88. F20A1.9 tofu-2 3341 7.515 0.948 0.940 0.928 0.940 0.970 0.929 0.930 0.930 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
89. K07C5.6 K07C5.6 7375 7.514 0.932 0.861 0.962 0.861 0.995 0.969 0.947 0.987 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
90. Y105E8B.3 riok-2 5531 7.513 0.959 0.955 0.923 0.955 0.974 0.968 0.850 0.929 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
91. T13H5.5 mrps-18B 3430 7.51 0.922 0.928 0.967 0.928 0.956 0.948 0.908 0.953 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
92. R166.4 pro-1 2701 7.51 0.895 0.911 0.929 0.911 0.977 0.948 0.972 0.967 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]
93. Y111B2A.2 Y111B2A.2 21569 7.51 0.890 0.959 0.964 0.959 0.956 0.947 0.906 0.929
94. Y40B1B.8 Y40B1B.8 4877 7.508 0.951 0.879 0.961 0.879 0.970 0.960 0.948 0.960
95. K07F5.15 K07F5.15 10171 7.507 0.922 0.951 0.915 0.951 0.963 0.962 0.903 0.940
96. R06C7.5 adsl-1 3236 7.505 0.965 0.931 0.878 0.931 0.965 0.959 0.958 0.918 Adenylosuccinate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q21774]
97. F22B5.9 fars-3 7209 7.503 0.945 0.936 0.958 0.936 0.912 0.967 0.933 0.916 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
98. ZC434.5 ears-1 4725 7.503 0.910 0.952 0.926 0.952 0.923 0.946 0.954 0.940 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
99. C49H3.10 xpo-3 9101 7.502 0.920 0.934 0.931 0.934 0.956 0.972 0.934 0.921 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
100. Y54E10BR.5 Y54E10BR.5 10734 7.502 0.925 0.933 0.938 0.933 0.938 0.966 0.967 0.902 Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA