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Results for Y48B6A.3

Gene ID Gene Name Reads Transcripts Annotation
Y48B6A.3 xrn-2 4881 Y48B6A.3 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]

Genes with expression patterns similar to Y48B6A.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48B6A.3 xrn-2 4881 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
2. D2096.8 nap-1 59459 7.791 0.966 0.966 0.974 0.966 0.989 0.955 0.990 0.985 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
3. C15H11.9 rrbs-1 9177 7.786 0.958 0.967 0.978 0.967 0.981 0.981 0.974 0.980 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
4. C25A1.10 dao-5 18351 7.762 0.955 0.966 0.964 0.966 0.988 0.974 0.967 0.982 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
5. T01C3.7 fib-1 23572 7.743 0.975 0.955 0.962 0.955 0.992 0.942 0.984 0.978 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
6. R13A5.12 lpd-7 10476 7.739 0.966 0.955 0.966 0.955 0.962 0.989 0.968 0.978 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
7. Y113G7B.17 prmt-1 43709 7.727 0.949 0.965 0.965 0.965 0.992 0.931 0.975 0.985 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
8. F10G7.1 tag-151 9031 7.707 0.968 0.955 0.973 0.955 0.981 0.966 0.951 0.958 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
9. Y71G12B.8 ddx-27 3584 7.683 0.945 0.966 0.924 0.966 0.971 0.961 0.976 0.974 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
10. T03D8.2 mrps-12 8253 7.674 0.966 0.957 0.969 0.957 0.977 0.940 0.974 0.934 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
11. C16A3.3 let-716 8448 7.672 0.905 0.959 0.966 0.959 0.993 0.965 0.948 0.977
12. T23G11.3 gld-1 41748 7.671 0.960 0.940 0.941 0.940 0.971 0.972 0.980 0.967 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
13. K09H9.6 lpd-6 5459 7.666 0.962 0.964 0.919 0.964 0.990 0.981 0.964 0.922 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
14. D2023.5 mpst-1 10328 7.66 0.947 0.942 0.956 0.942 0.948 0.968 0.983 0.974 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
15. B0513.2 B0513.2 3641 7.649 0.927 0.931 0.951 0.931 0.976 0.990 0.977 0.966
16. F13G3.11 mrpl-13 6024 7.647 0.939 0.963 0.962 0.963 0.952 0.973 0.956 0.939 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
17. Y54H5A.2 Y54H5A.2 2168 7.646 0.964 0.903 0.968 0.903 0.985 0.983 0.965 0.975
18. Y54E5A.6 Y54E5A.6 770 7.643 0.958 0.936 0.955 0.936 0.973 0.965 0.936 0.984
19. T28D9.10 snr-3 9995 7.642 0.939 0.939 0.978 0.939 0.955 0.982 0.965 0.945 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
20. Y111B2A.17 elpc-2 3504 7.641 0.960 0.940 0.946 0.940 0.981 0.970 0.951 0.953 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
21. K08F4.2 gtbp-1 25222 7.64 0.959 0.939 0.932 0.939 0.958 0.972 0.979 0.962 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
22. F55H2.6 clu-1 21404 7.624 0.969 0.956 0.949 0.956 0.960 0.957 0.950 0.927 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
23. C07E3.2 pro-2 4193 7.624 0.903 0.952 0.924 0.952 0.979 0.975 0.977 0.962 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
24. F59A2.3 cri-3 15077 7.621 0.958 0.947 0.962 0.947 0.918 0.977 0.964 0.948 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
25. F09F7.3 rpc-2 9751 7.621 0.948 0.942 0.944 0.942 0.987 0.981 0.960 0.917 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
26. C03D6.8 rpl-24.2 5932 7.618 0.979 0.935 0.894 0.935 0.948 0.981 0.978 0.968 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
27. T23F6.4 rbd-1 5825 7.617 0.899 0.963 0.943 0.963 0.972 0.970 0.928 0.979 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
28. C06A1.5 rpb-6 7515 7.615 0.930 0.939 0.945 0.939 0.942 0.978 0.958 0.984 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
29. C14A4.14 mrps-22 7966 7.613 0.971 0.946 0.951 0.946 0.918 0.973 0.940 0.968 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
30. W01B11.3 nol-5 23544 7.612 0.921 0.950 0.979 0.950 0.980 0.878 0.986 0.968 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
31. Y116A8C.42 snr-1 17062 7.609 0.971 0.933 0.940 0.933 0.965 0.954 0.971 0.942 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
32. K01G5.8 K01G5.8 4694 7.609 0.980 0.890 0.955 0.890 0.958 0.981 0.989 0.966
33. ZK856.10 rpc-25 3282 7.609 0.908 0.914 0.973 0.914 0.977 0.981 0.962 0.980 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
34. T21G5.3 glh-1 16470 7.608 0.955 0.969 0.990 0.969 0.947 0.922 0.921 0.935 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
35. Y53C12B.3 nos-3 20231 7.596 0.954 0.946 0.926 0.946 0.959 0.932 0.955 0.978 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
36. ZK945.3 puf-12 6266 7.587 0.830 0.954 0.948 0.954 0.989 0.980 0.960 0.972 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
37. T19A6.2 ngp-1 5884 7.586 0.957 0.944 0.924 0.944 0.962 0.931 0.961 0.963 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
38. F56D12.5 vig-1 42594 7.585 0.962 0.972 0.977 0.972 0.924 0.927 0.914 0.937 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
39. T24H7.1 phb-2 28775 7.584 0.962 0.946 0.968 0.946 0.928 0.949 0.968 0.917 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
40. C27H6.2 ruvb-1 6291 7.579 0.943 0.962 0.923 0.962 0.952 0.957 0.953 0.927 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
41. F55A12.8 nath-10 4253 7.577 0.884 0.921 0.944 0.921 0.985 0.987 0.975 0.960 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
42. T21B10.7 cct-2 13999 7.576 0.944 0.962 0.927 0.962 0.962 0.956 0.937 0.926 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
43. Y14H12B.2 Y14H12B.2 6496 7.575 0.903 0.920 0.894 0.920 0.990 0.987 0.974 0.987
44. F41G3.14 exos-8 2300 7.574 0.945 0.936 0.868 0.936 0.974 0.965 0.969 0.981 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
45. Y23H5B.6 Y23H5B.6 5886 7.574 0.938 0.948 0.890 0.948 0.974 0.968 0.938 0.970
46. Y50D7A.9 taco-1 5949 7.573 0.944 0.930 0.968 0.930 0.941 0.939 0.956 0.965 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
47. W07E6.1 nol-1 7892 7.57 0.892 0.924 0.948 0.924 0.988 0.966 0.951 0.977 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
48. K12H4.4 K12H4.4 8351 7.57 0.928 0.923 0.894 0.923 0.970 0.981 0.980 0.971 Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
49. Y53C12B.2 Y53C12B.2 6115 7.566 0.960 0.926 0.919 0.926 0.983 0.970 0.972 0.910 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
50. Y18D10A.17 car-1 87364 7.566 0.935 0.948 0.915 0.948 0.950 0.957 0.962 0.951 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
51. Y37D8A.11 cec-7 8801 7.565 0.937 0.933 0.926 0.933 0.980 0.978 0.981 0.897 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
52. Y18D10A.19 fkb-2 48128 7.563 0.982 0.974 0.984 0.974 0.919 0.906 0.897 0.927 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
53. Y71F9B.4 snr-7 13542 7.56 0.955 0.927 0.919 0.927 0.967 0.966 0.924 0.975 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
54. T21B10.1 mrpl-50 14595 7.558 0.951 0.955 0.964 0.955 0.921 0.961 0.952 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
55. C01G8.6 hpo-32 7439 7.558 0.943 0.924 0.948 0.924 0.945 0.974 0.961 0.939
56. B0035.12 sart-3 7188 7.557 0.958 0.918 0.933 0.918 0.977 0.964 0.962 0.927 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
57. C34E10.11 mrps-26 4649 7.556 0.944 0.956 0.964 0.956 0.970 0.927 0.913 0.926 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
58. Y40G12A.1 ubh-3 4142 7.555 0.923 0.925 0.961 0.925 0.928 0.962 0.954 0.977 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
59. F56D1.3 mrps-16 2309 7.554 0.951 0.925 0.934 0.925 0.970 0.987 0.926 0.936 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
60. W06H3.3 ctps-1 8363 7.551 0.934 0.939 0.925 0.939 0.948 0.959 0.929 0.978 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
61. W08E3.1 snr-2 14849 7.55 0.921 0.939 0.939 0.939 0.905 0.962 0.957 0.988 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
62. F21C3.4 rde-2 6286 7.549 0.951 0.897 0.925 0.897 0.963 0.986 0.970 0.960
63. Y92H12BR.8 mrpl-15 6344 7.549 0.967 0.919 0.939 0.919 0.955 0.954 0.933 0.963 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
64. C26E6.4 rpb-2 7053 7.548 0.945 0.944 0.950 0.944 0.937 0.952 0.918 0.958 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
65. T25G3.4 T25G3.4 9394 7.547 0.956 0.920 0.945 0.920 0.982 0.947 0.976 0.901 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
66. C34E10.2 gop-2 5684 7.547 0.916 0.927 0.911 0.927 0.974 0.987 0.933 0.972 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
67. C14A4.1 dohh-1 4890 7.546 0.934 0.912 0.955 0.912 0.965 0.988 0.932 0.948 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
68. F28D1.1 wdr-46 4050 7.545 0.913 0.929 0.915 0.929 0.989 0.962 0.962 0.946 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
69. C27H6.3 tofu-1 2992 7.545 0.946 0.911 0.960 0.911 0.974 0.968 0.960 0.915 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
70. F14B4.3 rpoa-2 7549 7.543 0.890 0.924 0.891 0.924 0.985 0.977 0.978 0.974 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
71. F53A2.4 nud-1 7818 7.54 0.932 0.917 0.921 0.917 0.971 0.992 0.959 0.931 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
72. F41H10.10 htp-1 6425 7.536 0.959 0.935 0.974 0.935 0.967 0.929 0.971 0.866 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
73. F53F4.12 F53F4.12 2683 7.536 0.951 0.879 0.934 0.879 0.967 0.993 0.958 0.975
74. C26D10.1 ran-3 11111 7.531 0.867 0.947 0.956 0.947 0.917 0.967 0.965 0.965 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
75. C05D11.10 mrps-17 4613 7.53 0.919 0.929 0.951 0.929 0.929 0.963 0.940 0.970 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
76. Y48C3A.7 mac-1 2197 7.53 0.879 0.958 0.882 0.958 0.974 0.983 0.947 0.949 Member of AAA family binding CED-4 [Source:RefSeq peptide;Acc:NP_496814]
77. F59A2.1 npp-9 34375 7.528 0.914 0.905 0.917 0.905 0.984 0.978 0.973 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
78. H43I07.2 rpac-40 3342 7.527 0.913 0.917 0.905 0.917 0.946 0.984 0.985 0.960 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
79. Y39B6A.35 tgt-2 2364 7.526 0.922 0.924 0.905 0.924 0.950 0.970 0.946 0.985 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
80. Y47D3A.26 smc-3 6256 7.526 0.879 0.951 0.905 0.951 0.966 0.972 0.951 0.951 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
81. K04C2.3 K04C2.3 23540 7.525 0.946 0.863 0.952 0.863 0.975 0.981 0.957 0.988
82. Y73B6BL.32 lsm-8 11002 7.524 0.938 0.945 0.957 0.945 0.963 0.900 0.929 0.947 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
83. C56C10.8 icd-1 89788 7.523 0.932 0.970 0.968 0.970 0.922 0.891 0.956 0.914 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
84. C01F6.8 icln-1 6586 7.522 0.923 0.929 0.920 0.929 0.963 0.956 0.984 0.918 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
85. T28D9.2 rsp-5 6460 7.521 0.906 0.945 0.898 0.945 0.962 0.977 0.944 0.944 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
86. C05C8.5 C05C8.5 2655 7.516 0.928 0.879 0.937 0.879 0.984 0.983 0.934 0.992
87. B0261.4 mrpl-47 8210 7.515 0.969 0.935 0.953 0.935 0.909 0.928 0.933 0.953 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
88. F20A1.9 tofu-2 3341 7.515 0.948 0.940 0.928 0.940 0.970 0.929 0.930 0.930 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
89. K07C5.6 K07C5.6 7375 7.514 0.932 0.861 0.962 0.861 0.995 0.969 0.947 0.987 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
90. Y105E8B.3 riok-2 5531 7.513 0.959 0.955 0.923 0.955 0.974 0.968 0.850 0.929 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
91. T13H5.5 mrps-18B 3430 7.51 0.922 0.928 0.967 0.928 0.956 0.948 0.908 0.953 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
92. Y111B2A.2 Y111B2A.2 21569 7.51 0.890 0.959 0.964 0.959 0.956 0.947 0.906 0.929
93. R166.4 pro-1 2701 7.51 0.895 0.911 0.929 0.911 0.977 0.948 0.972 0.967 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]
94. Y40B1B.8 Y40B1B.8 4877 7.508 0.951 0.879 0.961 0.879 0.970 0.960 0.948 0.960
95. K07F5.15 K07F5.15 10171 7.507 0.922 0.951 0.915 0.951 0.963 0.962 0.903 0.940
96. R06C7.5 adsl-1 3236 7.505 0.965 0.931 0.878 0.931 0.965 0.959 0.958 0.918 Adenylosuccinate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q21774]
97. ZC434.5 ears-1 4725 7.503 0.910 0.952 0.926 0.952 0.923 0.946 0.954 0.940 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
98. F22B5.9 fars-3 7209 7.503 0.945 0.936 0.958 0.936 0.912 0.967 0.933 0.916 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
99. C49H3.10 xpo-3 9101 7.502 0.920 0.934 0.931 0.934 0.956 0.972 0.934 0.921 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
100. Y54E10BR.5 Y54E10BR.5 10734 7.502 0.925 0.933 0.938 0.933 0.938 0.966 0.967 0.902 Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA