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Results for F54B3.3

Gene ID Gene Name Reads Transcripts Annotation
F54B3.3 atad-3 9583 F54B3.3.1, F54B3.3.2 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]

Genes with expression patterns similar to F54B3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54B3.3 atad-3 9583 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
2. Y49A3A.5 cyn-1 6411 7.713 0.948 0.953 0.981 0.953 0.972 0.973 0.941 0.992 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
3. T01E8.6 mrps-14 9328 7.708 0.967 0.941 0.956 0.941 0.973 0.984 0.960 0.986 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
4. Y50D7A.9 taco-1 5949 7.704 0.947 0.955 0.950 0.955 0.979 0.978 0.968 0.972 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
5. T02G5.9 kars-1 9763 7.689 0.950 0.964 0.922 0.964 0.986 0.980 0.952 0.971 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
6. F22B5.9 fars-3 7209 7.688 0.960 0.932 0.966 0.932 0.973 0.984 0.974 0.967 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
7. C14A4.14 mrps-22 7966 7.671 0.945 0.946 0.931 0.946 0.967 0.975 0.972 0.989 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
8. T08B2.9 fars-1 12650 7.669 0.983 0.959 0.959 0.959 0.951 0.946 0.971 0.941 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
9. C18E9.6 tomm-40 13426 7.656 0.950 0.954 0.958 0.954 0.965 0.969 0.949 0.957 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
10. F29C12.4 gfm-1 8964 7.654 0.951 0.943 0.960 0.943 0.965 0.957 0.969 0.966 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
11. F56D2.6 ddx-15 12282 7.647 0.933 0.952 0.918 0.952 0.976 0.971 0.960 0.985 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
12. T28D9.10 snr-3 9995 7.643 0.955 0.923 0.951 0.923 0.973 0.986 0.954 0.978 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
13. K08F4.2 gtbp-1 25222 7.641 0.959 0.943 0.936 0.943 0.963 0.963 0.946 0.988 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
14. T21C9.12 scpl-4 14723 7.638 0.960 0.942 0.943 0.942 0.964 0.980 0.950 0.957 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
15. Y43F8C.8 mrps-28 4036 7.635 0.954 0.921 0.962 0.921 0.966 0.969 0.955 0.987 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
16. C34E10.5 prmt-5 12277 7.635 0.957 0.951 0.918 0.951 0.981 0.977 0.960 0.940 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
17. Y71F9B.4 snr-7 13542 7.634 0.978 0.949 0.935 0.949 0.961 0.972 0.932 0.958 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
18. T24H7.1 phb-2 28775 7.626 0.962 0.919 0.929 0.919 0.968 0.985 0.978 0.966 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
19. Y116A8C.42 snr-1 17062 7.625 0.974 0.916 0.916 0.916 0.985 0.978 0.976 0.964 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
20. T07D4.4 ddx-19 7234 7.625 0.959 0.934 0.953 0.934 0.946 0.991 0.973 0.935 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
21. C06G3.11 tin-9.1 7773 7.625 0.943 0.959 0.956 0.959 0.946 0.944 0.944 0.974 Mitochondrial import inner membrane translocase subunit Tim9 [Source:UniProtKB/Swiss-Prot;Acc:Q17754]
22. F10G7.1 tag-151 9031 7.622 0.928 0.952 0.940 0.952 0.979 0.976 0.946 0.949 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
23. T25G3.4 T25G3.4 9394 7.62 0.961 0.938 0.934 0.938 0.963 0.970 0.967 0.949 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
24. Y46G5A.4 snrp-200 13827 7.619 0.947 0.942 0.908 0.942 0.977 0.965 0.969 0.969 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
25. C06A1.5 rpb-6 7515 7.612 0.953 0.927 0.899 0.927 0.970 0.988 0.980 0.968 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
26. Y23H5B.6 Y23H5B.6 5886 7.607 0.960 0.939 0.856 0.939 0.969 0.980 0.971 0.993
27. Y53C12B.3 nos-3 20231 7.606 0.961 0.929 0.898 0.929 0.980 0.946 0.979 0.984 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
28. C05D11.10 mrps-17 4613 7.604 0.945 0.917 0.928 0.917 0.979 0.989 0.956 0.973 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
29. F33D4.8 mrps-24 2853 7.6 0.942 0.931 0.940 0.931 0.975 0.974 0.958 0.949 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
30. Y34D9A.1 mrpl-38 5291 7.595 0.959 0.952 0.909 0.952 0.946 0.970 0.958 0.949 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
31. C08B11.5 sap-49 10553 7.592 0.945 0.913 0.944 0.913 0.963 0.983 0.956 0.975 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
32. F56F3.1 ifet-1 25772 7.59 0.943 0.935 0.901 0.935 0.972 0.979 0.950 0.975 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
33. K08F11.3 cif-1 10218 7.588 0.958 0.933 0.934 0.933 0.953 0.951 0.963 0.963 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
34. F58B3.5 mars-1 6729 7.587 0.956 0.922 0.934 0.922 0.989 0.979 0.979 0.906 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
35. C26E6.4 rpb-2 7053 7.586 0.932 0.933 0.923 0.933 0.963 0.982 0.967 0.953 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
36. T16G1.11 eif-3.K 14014 7.585 0.958 0.928 0.936 0.928 0.969 0.954 0.955 0.957 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
37. D2023.5 mpst-1 10328 7.585 0.966 0.914 0.952 0.914 0.972 0.987 0.953 0.927 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
38. T12G3.5 mrpl-51 5192 7.583 0.949 0.938 0.903 0.938 0.965 0.979 0.931 0.980 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
39. T17E9.2 nmt-1 8017 7.58 0.956 0.947 0.949 0.947 0.929 0.967 0.908 0.977 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
40. T28D9.2 rsp-5 6460 7.58 0.942 0.921 0.883 0.921 0.959 0.992 0.980 0.982 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
41. T06A10.4 lsy-13 7631 7.58 0.959 0.931 0.906 0.931 0.963 0.988 0.972 0.930
42. R07E5.14 rnp-4 11659 7.58 0.940 0.933 0.902 0.933 0.983 0.968 0.957 0.964 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
43. W06H3.3 ctps-1 8363 7.579 0.951 0.904 0.922 0.904 0.984 0.984 0.960 0.970 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
44. F58E10.3 ddx-17 15107 7.577 0.944 0.950 0.893 0.950 0.950 0.971 0.950 0.969 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
45. F55H2.6 clu-1 21404 7.575 0.928 0.921 0.920 0.921 0.976 0.975 0.969 0.965 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
46. Y92H12BR.8 mrpl-15 6344 7.574 0.963 0.943 0.974 0.943 0.957 0.959 0.891 0.944 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
47. F42A10.1 abcf-3 5557 7.571 0.951 0.946 0.934 0.946 0.973 0.929 0.934 0.958 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
48. K01G5.8 K01G5.8 4694 7.57 0.926 0.937 0.911 0.937 0.942 0.984 0.968 0.965
49. Y71G12B.9 lin-65 7476 7.569 0.934 0.939 0.869 0.939 0.979 0.984 0.975 0.950 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
50. PAR2.1 mtss-1 4055 7.568 0.959 0.879 0.938 0.879 0.974 0.974 0.983 0.982 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
51. C15H11.9 rrbs-1 9177 7.567 0.937 0.889 0.937 0.889 0.975 0.982 0.980 0.978 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
52. F09F7.3 rpc-2 9751 7.567 0.939 0.944 0.912 0.944 0.952 0.973 0.967 0.936 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
53. W08E3.3 ola-1 20885 7.566 0.971 0.920 0.960 0.920 0.969 0.933 0.969 0.924 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
54. B0511.7 B0511.7 1070 7.565 0.941 0.902 0.899 0.902 0.963 0.984 0.985 0.989
55. F25H5.4 eef-2 34846 7.565 0.968 0.935 0.911 0.935 0.974 0.915 0.975 0.952 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
56. DY3.1 tin-13 5225 7.563 0.965 0.921 0.919 0.921 0.945 0.947 0.962 0.983 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
57. F58D5.1 hrp-2 17211 7.562 0.960 0.919 0.929 0.919 0.952 0.950 0.966 0.967 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
58. Y37E3.9 phb-1 29211 7.562 0.937 0.941 0.956 0.941 0.944 0.938 0.942 0.963 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
59. F33D4.5 mrpl-1 5337 7.561 0.965 0.915 0.899 0.915 0.977 0.966 0.939 0.985 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
60. F28H1.3 aars-2 13537 7.561 0.946 0.920 0.918 0.920 0.971 0.962 0.952 0.972 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
61. F56D12.5 vig-1 42594 7.56 0.941 0.916 0.920 0.916 0.969 0.956 0.963 0.979 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
62. T05H4.6 erfa-1 12542 7.557 0.961 0.944 0.946 0.944 0.948 0.951 0.935 0.928 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
63. F29C4.6 tut-1 5637 7.556 0.955 0.918 0.911 0.918 0.973 0.973 0.971 0.937 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
64. F59A2.1 npp-9 34375 7.556 0.946 0.911 0.870 0.911 0.982 0.993 0.968 0.975 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
65. F26F4.10 rars-1 9971 7.555 0.962 0.947 0.913 0.947 0.949 0.938 0.954 0.945 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
66. B0511.8 mrps-30 5050 7.554 0.932 0.935 0.929 0.935 0.969 0.953 0.979 0.922 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
67. C08F8.1 pfd-1 10199 7.553 0.961 0.917 0.922 0.917 0.969 0.963 0.982 0.922 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
68. B0205.11 mrpl-9 9162 7.549 0.961 0.938 0.906 0.938 0.978 0.943 0.948 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
69. T19B4.2 npp-7 13073 7.548 0.938 0.909 0.900 0.909 0.967 0.970 0.988 0.967 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
70. F56B3.8 mrpl-2 3195 7.547 0.950 0.905 0.912 0.905 0.984 0.973 0.947 0.971 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
71. T12E12.2 cec-6 4758 7.547 0.917 0.930 0.900 0.930 0.965 0.981 0.965 0.959 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
72. C26D10.2 hel-1 28697 7.547 0.960 0.919 0.943 0.919 0.924 0.953 0.946 0.983 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
73. R13F6.10 cra-1 11610 7.546 0.942 0.907 0.929 0.907 0.964 0.966 0.962 0.969 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
74. D2013.7 eif-3.F 21004 7.546 0.963 0.934 0.950 0.934 0.949 0.935 0.924 0.957 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
75. Y54E5A.6 Y54E5A.6 770 7.546 0.952 0.888 0.922 0.888 0.990 0.984 0.961 0.961
76. ZK1058.4 ccdc-47 8879 7.545 0.927 0.947 0.928 0.947 0.962 0.962 0.921 0.951 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
77. F53F4.12 F53F4.12 2683 7.545 0.976 0.893 0.908 0.893 0.939 0.985 0.977 0.974
78. T13H5.5 mrps-18B 3430 7.545 0.951 0.901 0.963 0.901 0.982 0.977 0.920 0.950 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
79. C33H5.12 rsp-6 23342 7.543 0.924 0.948 0.890 0.948 0.941 0.968 0.952 0.972 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
80. W04B5.4 mrpl-30 4938 7.542 0.893 0.941 0.940 0.941 0.937 0.967 0.977 0.946 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
81. Y17G7A.1 hmg-12 29989 7.54 0.952 0.914 0.886 0.914 0.985 0.979 0.957 0.953 HMG [Source:RefSeq peptide;Acc:NP_496544]
82. T21B10.1 mrpl-50 14595 7.539 0.957 0.936 0.938 0.936 0.964 0.972 0.945 0.891 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
83. Y37D8A.9 mrg-1 14369 7.538 0.913 0.926 0.854 0.926 0.982 0.985 0.978 0.974 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
84. H27M09.2 rpb-5 4744 7.537 0.948 0.885 0.932 0.885 0.958 0.971 0.975 0.983 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
85. Y40B1B.8 Y40B1B.8 4877 7.537 0.949 0.914 0.886 0.914 0.974 0.974 0.969 0.957
86. Y22D7AL.5 hsp-60 42542 7.535 0.934 0.908 0.958 0.908 0.954 0.937 0.981 0.955 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
87. F59A2.3 cri-3 15077 7.535 0.937 0.900 0.934 0.900 0.965 0.988 0.936 0.975 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
88. F21C3.4 rde-2 6286 7.535 0.967 0.912 0.882 0.912 0.956 0.984 0.966 0.956
89. Y73B6BL.32 lsm-8 11002 7.535 0.949 0.927 0.914 0.927 0.979 0.953 0.935 0.951 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
90. F13G3.11 mrpl-13 6024 7.534 0.930 0.906 0.931 0.906 0.987 0.981 0.973 0.920 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
91. ZK652.1 snr-5 5993 7.534 0.938 0.928 0.909 0.928 0.955 0.991 0.904 0.981 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
92. ZK381.1 him-3 4913 7.532 0.950 0.920 0.908 0.920 0.981 0.984 0.960 0.909 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
93. Y53C12B.2 Y53C12B.2 6115 7.532 0.955 0.931 0.905 0.931 0.946 0.968 0.955 0.941 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
94. T10B5.5 cct-7 24616 7.532 0.952 0.930 0.925 0.930 0.965 0.935 0.947 0.948 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
95. K07A12.7 mrps-15 6325 7.531 0.959 0.915 0.890 0.915 0.968 0.940 0.962 0.982 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
96. B0464.1 dars-1 12331 7.531 0.967 0.944 0.944 0.944 0.948 0.902 0.949 0.933 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
97. F22D6.3 nars-1 18624 7.531 0.946 0.935 0.878 0.935 0.961 0.972 0.931 0.973 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
98. Y38A8.3 ulp-2 7403 7.53 0.948 0.941 0.881 0.941 0.977 0.989 0.935 0.918 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
99. C41D11.2 eif-3.H 7520 7.53 0.972 0.942 0.943 0.942 0.896 0.943 0.950 0.942 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
100. C05C8.5 C05C8.5 2655 7.529 0.960 0.924 0.853 0.924 0.975 0.977 0.958 0.958

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA