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Results for T07D4.4

Gene ID Gene Name Reads Transcripts Annotation
T07D4.4 ddx-19 7234 T07D4.4a, T07D4.4b, T07D4.4c, T07D4.4d, T07D4.4e.1, T07D4.4e.2 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]

Genes with expression patterns similar to T07D4.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T07D4.4 ddx-19 7234 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
2. T28D9.10 snr-3 9995 7.708 0.951 0.944 0.985 0.944 0.965 0.981 0.967 0.971 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
3. K08F4.2 gtbp-1 25222 7.707 0.971 0.968 0.974 0.968 0.964 0.959 0.955 0.948 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
4. Y116A8C.42 snr-1 17062 7.685 0.970 0.952 0.968 0.952 0.960 0.956 0.972 0.955 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
5. Y53C12B.3 nos-3 20231 7.683 0.970 0.961 0.960 0.961 0.975 0.944 0.967 0.945 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
6. F58B3.5 mars-1 6729 7.682 0.952 0.941 0.984 0.941 0.957 0.971 0.963 0.973 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
7. F22B5.9 fars-3 7209 7.678 0.959 0.967 0.984 0.967 0.914 0.986 0.965 0.936 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
8. T25G3.4 T25G3.4 9394 7.67 0.973 0.965 0.975 0.965 0.955 0.969 0.948 0.920 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
9. T21B10.1 mrpl-50 14595 7.667 0.954 0.962 0.980 0.962 0.969 0.971 0.953 0.916 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
10. R07E5.14 rnp-4 11659 7.666 0.939 0.946 0.954 0.946 0.972 0.972 0.973 0.964 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
11. F59A2.1 npp-9 34375 7.664 0.961 0.951 0.940 0.951 0.955 0.987 0.966 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
12. Y37D8A.11 cec-7 8801 7.659 0.960 0.948 0.964 0.948 0.946 0.958 0.968 0.967 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
13. W08E3.1 snr-2 14849 7.658 0.965 0.956 0.981 0.956 0.968 0.973 0.956 0.903 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
14. F55H2.6 clu-1 21404 7.648 0.948 0.946 0.963 0.946 0.953 0.963 0.952 0.977 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
15. Y50D7A.9 taco-1 5949 7.647 0.949 0.954 0.964 0.954 0.958 0.967 0.953 0.948 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
16. T06A10.4 lsy-13 7631 7.646 0.965 0.939 0.969 0.939 0.925 0.985 0.974 0.950
17. T01E8.6 mrps-14 9328 7.645 0.961 0.942 0.982 0.942 0.950 0.987 0.962 0.919 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
18. T02G5.9 kars-1 9763 7.644 0.931 0.963 0.968 0.963 0.946 0.969 0.943 0.961 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
19. Y41D4B.19 npp-8 12992 7.643 0.927 0.959 0.955 0.959 0.990 0.983 0.964 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
20. T12E12.2 cec-6 4758 7.642 0.945 0.964 0.968 0.964 0.948 0.966 0.963 0.924 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
21. F29C4.6 tut-1 5637 7.64 0.959 0.957 0.977 0.957 0.944 0.975 0.934 0.937 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
22. F56F3.1 ifet-1 25772 7.638 0.930 0.938 0.967 0.938 0.979 0.979 0.970 0.937 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
23. C26E6.4 rpb-2 7053 7.635 0.942 0.962 0.967 0.962 0.929 0.973 0.937 0.963 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
24. Y23H5B.6 Y23H5B.6 5886 7.629 0.956 0.955 0.938 0.955 0.946 0.971 0.970 0.938
25. Y71F9B.4 snr-7 13542 7.627 0.953 0.949 0.964 0.949 0.977 0.968 0.944 0.923 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
26. F54B3.3 atad-3 9583 7.625 0.959 0.934 0.953 0.934 0.946 0.991 0.973 0.935 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
27. T08B2.9 fars-1 12650 7.625 0.971 0.957 0.978 0.957 0.936 0.950 0.950 0.926 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
28. F58E10.3 ddx-17 15107 7.624 0.948 0.953 0.956 0.953 0.913 0.968 0.954 0.979 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
29. Y71G12B.9 lin-65 7476 7.623 0.932 0.954 0.949 0.954 0.964 0.972 0.960 0.938 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
30. C34E10.5 prmt-5 12277 7.623 0.950 0.966 0.977 0.966 0.938 0.978 0.934 0.914 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
31. T28D9.2 rsp-5 6460 7.623 0.954 0.938 0.948 0.938 0.950 0.991 0.957 0.947 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
32. F23F1.1 nfyc-1 9983 7.618 0.941 0.935 0.937 0.935 0.971 0.973 0.952 0.974 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
33. F56D2.6 ddx-15 12282 7.615 0.953 0.971 0.964 0.971 0.931 0.953 0.916 0.956 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
34. Y54E5A.4 npp-4 6288 7.615 0.951 0.948 0.942 0.948 0.943 0.959 0.949 0.975 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
35. F58D5.1 hrp-2 17211 7.614 0.970 0.953 0.968 0.953 0.929 0.940 0.934 0.967 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
36. Y39G10AR.7 ekl-7 7072 7.613 0.961 0.940 0.944 0.940 0.927 0.977 0.953 0.971
37. F28H1.3 aars-2 13537 7.613 0.948 0.957 0.962 0.957 0.942 0.955 0.936 0.956 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
38. C15H11.9 rrbs-1 9177 7.612 0.928 0.939 0.978 0.939 0.951 0.976 0.962 0.939 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
39. D2023.5 mpst-1 10328 7.611 0.937 0.928 0.981 0.928 0.985 0.982 0.958 0.912 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
40. F56D12.5 vig-1 42594 7.61 0.945 0.953 0.958 0.953 0.959 0.939 0.932 0.971 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
41. T23H2.1 npp-12 12425 7.607 0.953 0.955 0.948 0.955 0.924 0.977 0.946 0.949 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
42. W06H3.3 ctps-1 8363 7.605 0.942 0.923 0.969 0.923 0.977 0.974 0.967 0.930 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
43. T03D8.2 mrps-12 8253 7.603 0.928 0.932 0.960 0.932 0.948 0.967 0.974 0.962 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
44. T24H7.1 phb-2 28775 7.602 0.955 0.936 0.948 0.936 0.923 0.976 0.969 0.959 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
45. C14A4.14 mrps-22 7966 7.602 0.937 0.961 0.961 0.961 0.926 0.973 0.944 0.939 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
46. Y73B6BL.32 lsm-8 11002 7.601 0.943 0.960 0.975 0.960 0.956 0.943 0.949 0.915 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
47. B0205.11 mrpl-9 9162 7.601 0.948 0.949 0.969 0.949 0.951 0.943 0.949 0.943 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
48. C34E10.2 gop-2 5684 7.598 0.957 0.951 0.970 0.951 0.957 0.977 0.946 0.889 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
49. Y37E3.15 npp-13 7250 7.598 0.953 0.941 0.964 0.941 0.949 0.928 0.946 0.976 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
50. B0511.8 mrps-30 5050 7.595 0.949 0.954 0.964 0.954 0.916 0.951 0.954 0.953 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
51. ZK1128.6 ttll-4 6059 7.595 0.954 0.959 0.922 0.959 0.969 0.957 0.946 0.929 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
52. Y37D8A.18 mrps-10 4551 7.59 0.949 0.912 0.966 0.912 0.971 0.973 0.962 0.945 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
53. C49H3.10 xpo-3 9101 7.588 0.957 0.964 0.962 0.964 0.943 0.978 0.940 0.880 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
54. Y37D8A.9 mrg-1 14369 7.588 0.923 0.940 0.910 0.940 0.973 0.972 0.976 0.954 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
55. R13F6.10 cra-1 11610 7.587 0.952 0.953 0.979 0.953 0.931 0.951 0.907 0.961 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
56. F13G3.11 mrpl-13 6024 7.587 0.914 0.940 0.953 0.940 0.958 0.978 0.968 0.936 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
57. F28B3.8 imb-1 7515 7.586 0.937 0.948 0.941 0.948 0.956 0.959 0.963 0.934 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
58. F01F1.8 cct-6 29460 7.585 0.944 0.953 0.978 0.953 0.947 0.974 0.940 0.896 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
59. F53G2.7 mnat-1 10966 7.585 0.938 0.968 0.980 0.968 0.976 0.928 0.917 0.910 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
60. Y46G5A.4 snrp-200 13827 7.584 0.915 0.959 0.962 0.959 0.930 0.953 0.931 0.975 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
61. R13A5.12 lpd-7 10476 7.583 0.938 0.940 0.940 0.940 0.935 0.983 0.968 0.939 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
62. C27H6.3 tofu-1 2992 7.582 0.908 0.935 0.977 0.935 0.943 0.965 0.965 0.954 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
63. F59A2.3 cri-3 15077 7.582 0.927 0.928 0.951 0.928 0.945 0.980 0.953 0.970 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
64. C27H5.3 fust-1 6978 7.582 0.958 0.934 0.972 0.934 0.909 0.971 0.946 0.958 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
65. C06A1.5 rpb-6 7515 7.582 0.949 0.949 0.963 0.949 0.964 0.970 0.960 0.878 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
66. F21C3.4 rde-2 6286 7.581 0.957 0.930 0.953 0.930 0.965 0.981 0.956 0.909
67. Y17G7A.1 hmg-12 29989 7.578 0.965 0.945 0.962 0.945 0.928 0.951 0.932 0.950 HMG [Source:RefSeq peptide;Acc:NP_496544]
68. F09F7.3 rpc-2 9751 7.577 0.937 0.963 0.960 0.963 0.951 0.959 0.946 0.898 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
69. Y47D3A.26 smc-3 6256 7.577 0.934 0.944 0.946 0.944 0.966 0.987 0.971 0.885 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
70. T21B10.7 cct-2 13999 7.576 0.966 0.942 0.961 0.942 0.972 0.967 0.948 0.878 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
71. ZC410.2 mppb-1 3991 7.575 0.927 0.955 0.936 0.955 0.954 0.955 0.960 0.933 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
72. ZK652.1 snr-5 5993 7.573 0.925 0.950 0.964 0.950 0.921 0.990 0.927 0.946 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
73. C34E10.11 mrps-26 4649 7.573 0.901 0.945 0.985 0.945 0.935 0.966 0.957 0.939 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
74. F32A5.7 lsm-4 3785 7.572 0.945 0.925 0.951 0.925 0.949 0.978 0.954 0.945 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
75. C18E9.6 tomm-40 13426 7.572 0.943 0.963 0.969 0.963 0.904 0.965 0.926 0.939 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
76. F33D4.5 mrpl-1 5337 7.571 0.976 0.935 0.960 0.935 0.973 0.950 0.904 0.938 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
77. ZK742.1 xpo-1 20741 7.571 0.894 0.961 0.961 0.961 0.959 0.958 0.944 0.933 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
78. R09B3.5 mag-1 7496 7.569 0.931 0.926 0.965 0.926 0.978 0.976 0.935 0.932 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
79. W04B5.4 mrpl-30 4938 7.569 0.884 0.952 0.973 0.952 0.934 0.965 0.967 0.942 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
80. Y34D9A.1 mrpl-38 5291 7.569 0.958 0.966 0.962 0.966 0.881 0.959 0.922 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
81. R12C12.2 ran-5 14517 7.567 0.950 0.930 0.944 0.930 0.953 0.952 0.963 0.945 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
82. C26D10.1 ran-3 11111 7.566 0.941 0.947 0.966 0.947 0.953 0.970 0.962 0.880 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
83. F53A2.4 nud-1 7818 7.566 0.956 0.946 0.962 0.946 0.954 0.978 0.947 0.877 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
84. D2013.7 eif-3.F 21004 7.564 0.954 0.973 0.984 0.973 0.903 0.940 0.916 0.921 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
85. C46A5.9 hcf-1 6295 7.564 0.931 0.937 0.948 0.937 0.978 0.963 0.935 0.935 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
86. C36B1.5 prp-4 2714 7.564 0.953 0.941 0.943 0.941 0.943 0.986 0.922 0.935 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
87. C47B2.9 C47B2.9 4096 7.564 0.952 0.917 0.982 0.917 0.946 0.978 0.931 0.941
88. C25A1.10 dao-5 18351 7.563 0.907 0.947 0.965 0.947 0.944 0.959 0.957 0.937 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
89. K01G5.2 hpl-2 6781 7.562 0.925 0.926 0.966 0.926 0.970 0.968 0.939 0.942 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
90. H27M09.3 syp-4 5331 7.561 0.958 0.935 0.929 0.935 0.959 0.943 0.974 0.928
91. W08E3.3 ola-1 20885 7.56 0.966 0.929 0.976 0.929 0.955 0.934 0.950 0.921 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
92. K11D12.2 pqn-51 15951 7.56 0.936 0.944 0.951 0.944 0.951 0.957 0.939 0.938 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
93. F22D6.3 nars-1 18624 7.559 0.971 0.948 0.962 0.948 0.912 0.966 0.893 0.959 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
94. F10G7.1 tag-151 9031 7.559 0.943 0.963 0.987 0.963 0.965 0.957 0.943 0.838 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
95. F10G7.3 unc-85 5206 7.558 0.954 0.918 0.920 0.918 0.977 0.966 0.964 0.941 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
96. Y39B6A.35 tgt-2 2364 7.557 0.975 0.969 0.917 0.969 0.956 0.953 0.939 0.879 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
97. C08B11.5 sap-49 10553 7.556 0.955 0.930 0.973 0.930 0.932 0.976 0.946 0.914 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
98. B0205.9 B0205.9 3651 7.556 0.939 0.937 0.942 0.937 0.969 0.959 0.953 0.920
99. PAR2.1 mtss-1 4055 7.555 0.937 0.912 0.966 0.912 0.957 0.968 0.965 0.938 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
100. H27M09.2 rpb-5 4744 7.554 0.950 0.916 0.979 0.916 0.926 0.975 0.974 0.918 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA