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Results for K08E3.8

Gene ID Gene Name Reads Transcripts Annotation
K08E3.8 mdt-29 4678 K08E3.8 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]

Genes with expression patterns similar to K08E3.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. K08E3.8 mdt-29 4678 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
2. T10F2.4 prp-19 11298 7.719 0.944 0.976 0.973 0.976 0.969 0.954 0.978 0.949 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
3. C53D5.6 imb-3 28921 7.715 0.943 0.981 0.958 0.981 0.977 0.943 0.980 0.952 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
4. C08B11.5 sap-49 10553 7.709 0.950 0.970 0.966 0.970 0.972 0.948 0.977 0.956 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
5. K11D12.2 pqn-51 15951 7.702 0.946 0.973 0.965 0.973 0.980 0.979 0.944 0.942 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
6. T12D8.3 acbp-5 6816 7.697 0.934 0.974 0.947 0.974 0.980 0.981 0.964 0.943 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
7. T05H10.2 apn-1 5628 7.695 0.938 0.973 0.952 0.973 0.981 0.986 0.967 0.925 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
8. F18E2.3 scc-3 13464 7.692 0.953 0.981 0.959 0.981 0.977 0.957 0.942 0.942 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
9. F45H11.3 hpo-35 8299 7.687 0.944 0.964 0.973 0.964 0.969 0.976 0.953 0.944
10. T04A8.14 emb-5 11746 7.685 0.944 0.976 0.965 0.976 0.971 0.983 0.966 0.904 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
11. C34E10.5 prmt-5 12277 7.684 0.948 0.958 0.972 0.958 0.978 0.965 0.966 0.939 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
12. T10C6.4 srx-44 8454 7.683 0.948 0.968 0.963 0.968 0.978 0.965 0.963 0.930 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
13. F56F3.1 ifet-1 25772 7.674 0.953 0.967 0.964 0.967 0.966 0.951 0.952 0.954 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
14. F56D1.7 daz-1 23684 7.672 0.962 0.962 0.968 0.962 0.980 0.963 0.956 0.919 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
15. C25D7.8 otub-1 7941 7.672 0.955 0.965 0.965 0.965 0.956 0.987 0.951 0.928 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
16. B0035.3 B0035.3 4118 7.67 0.958 0.971 0.970 0.971 0.955 0.969 0.963 0.913
17. F52C9.7 mog-3 9880 7.668 0.943 0.973 0.962 0.973 0.947 0.946 0.975 0.949 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
18. F42A6.7 hrp-1 28201 7.667 0.963 0.964 0.969 0.964 0.959 0.950 0.982 0.916 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
19. C50C3.6 prp-8 19582 7.665 0.961 0.962 0.958 0.962 0.979 0.967 0.950 0.926 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
20. Y110A7A.8 prp-31 4436 7.662 0.954 0.972 0.954 0.972 0.960 0.977 0.933 0.940 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
21. W02F12.6 sna-1 7338 7.661 0.950 0.972 0.945 0.972 0.971 0.967 0.943 0.941 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
22. T19B4.2 npp-7 13073 7.66 0.943 0.974 0.956 0.974 0.968 0.947 0.947 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
23. C02B10.5 C02B10.5 9171 7.658 0.957 0.959 0.962 0.959 0.959 0.963 0.979 0.920
24. T17E9.2 nmt-1 8017 7.657 0.926 0.975 0.962 0.975 0.961 0.942 0.976 0.940 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
25. F56D2.6 ddx-15 12282 7.655 0.946 0.973 0.969 0.973 0.947 0.932 0.972 0.943 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
26. T21B10.4 T21B10.4 11648 7.655 0.970 0.940 0.951 0.940 0.966 0.969 0.956 0.963
27. F22D6.3 nars-1 18624 7.654 0.962 0.976 0.954 0.976 0.972 0.953 0.956 0.905 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
28. F08F8.3 kap-1 31437 7.653 0.967 0.976 0.966 0.976 0.971 0.938 0.950 0.909 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
29. Y113G7B.23 swsn-1 13766 7.65 0.957 0.963 0.970 0.963 0.960 0.973 0.949 0.915 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
30. Y40B1B.5 eif-3.J 15061 7.649 0.952 0.963 0.957 0.963 0.977 0.967 0.947 0.923 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
31. Y61A9LA.8 sut-2 11388 7.649 0.946 0.974 0.949 0.974 0.985 0.950 0.965 0.906 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
32. Y54E5A.4 npp-4 6288 7.648 0.957 0.970 0.959 0.970 0.959 0.957 0.954 0.922 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
33. Y102A5A.1 cand-1 11808 7.639 0.931 0.970 0.962 0.970 0.968 0.975 0.967 0.896 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
34. C08B11.6 arp-6 4646 7.638 0.951 0.955 0.920 0.955 0.976 0.977 0.962 0.942 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
35. Y47G6A.20 rnp-6 5542 7.638 0.952 0.979 0.947 0.979 0.954 0.964 0.933 0.930 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
36. C15H11.4 dhs-22 21674 7.636 0.951 0.966 0.965 0.966 0.960 0.943 0.953 0.932 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
37. C48E7.3 lpd-2 10330 7.634 0.933 0.967 0.960 0.967 0.979 0.975 0.919 0.934 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
38. K01C8.10 cct-4 15077 7.632 0.963 0.966 0.961 0.966 0.971 0.940 0.953 0.912 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
39. F26F4.10 rars-1 9971 7.632 0.945 0.958 0.956 0.958 0.971 0.970 0.967 0.907 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
40. ZK177.8 ZK177.8 3403 7.63 0.969 0.952 0.960 0.952 0.960 0.974 0.926 0.937
41. Y111B2A.18 rsp-3 43731 7.63 0.948 0.970 0.963 0.970 0.967 0.930 0.968 0.914 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
42. T20G5.11 rde-4 3966 7.629 0.949 0.963 0.979 0.963 0.968 0.961 0.943 0.903 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
43. Y46G5A.4 snrp-200 13827 7.628 0.917 0.976 0.978 0.976 0.957 0.946 0.979 0.899 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
44. F39B2.11 mtx-1 8526 7.627 0.949 0.955 0.966 0.955 0.976 0.965 0.926 0.935 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
45. F32H2.1 snpc-4 7581 7.627 0.952 0.968 0.952 0.968 0.936 0.925 0.965 0.961 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
46. T05F1.6 hsr-9 13312 7.627 0.943 0.971 0.972 0.971 0.968 0.959 0.947 0.896
47. Y53C12B.3 nos-3 20231 7.626 0.945 0.986 0.973 0.986 0.933 0.928 0.936 0.939 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
48. C18D11.4 rsp-8 18308 7.626 0.929 0.968 0.954 0.968 0.977 0.956 0.975 0.899 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
49. E01A2.4 let-504 9788 7.626 0.940 0.975 0.922 0.975 0.977 0.969 0.956 0.912
50. C28H8.9 dpff-1 8684 7.625 0.969 0.960 0.964 0.960 0.964 0.964 0.943 0.901 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
51. F28B3.7 him-1 18274 7.625 0.954 0.971 0.973 0.971 0.982 0.973 0.966 0.835 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
52. Y116A8C.35 uaf-2 13808 7.622 0.945 0.974 0.958 0.974 0.972 0.957 0.946 0.896 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
53. C52E4.6 cyl-1 6405 7.621 0.962 0.978 0.942 0.978 0.973 0.958 0.954 0.876 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
54. T01G9.4 npp-2 5361 7.62 0.927 0.976 0.971 0.976 0.970 0.949 0.943 0.908 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
55. K01G5.4 ran-1 32379 7.619 0.966 0.979 0.938 0.979 0.941 0.952 0.961 0.903 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
56. Y48G8AL.6 smg-2 12561 7.618 0.942 0.969 0.943 0.969 0.958 0.965 0.932 0.940 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
57. C27B7.1 spr-2 14958 7.618 0.938 0.979 0.958 0.979 0.953 0.941 0.966 0.904 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
58. T16G1.11 eif-3.K 14014 7.617 0.952 0.974 0.943 0.974 0.962 0.937 0.985 0.890 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
59. F36A2.1 cids-2 4551 7.617 0.934 0.973 0.945 0.973 0.949 0.958 0.967 0.918 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
60. F41E6.4 smk-1 22394 7.617 0.944 0.981 0.975 0.981 0.963 0.954 0.907 0.912 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
61. ZK1127.4 ZK1127.4 3088 7.617 0.906 0.952 0.963 0.952 0.979 0.965 0.964 0.936 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
62. ZK1058.4 ccdc-47 8879 7.615 0.960 0.953 0.953 0.953 0.954 0.955 0.965 0.922 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
63. ZK616.6 perm-3 16186 7.614 0.931 0.957 0.960 0.957 0.972 0.980 0.948 0.909 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
64. W03F9.5 ttb-1 8682 7.613 0.953 0.977 0.959 0.977 0.951 0.953 0.922 0.921 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
65. Y37E3.15 npp-13 7250 7.612 0.975 0.972 0.963 0.972 0.926 0.939 0.955 0.910 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
66. K03B4.2 K03B4.2 21796 7.61 0.943 0.966 0.956 0.966 0.963 0.930 0.963 0.923
67. T26A5.5 jhdm-1 12698 7.61 0.939 0.968 0.969 0.968 0.975 0.948 0.940 0.903 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
68. D2030.6 prg-1 26751 7.61 0.938 0.944 0.975 0.944 0.976 0.945 0.966 0.922 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
69. C26E6.4 rpb-2 7053 7.609 0.923 0.975 0.959 0.975 0.936 0.948 0.967 0.926 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
70. R13F6.10 cra-1 11610 7.609 0.929 0.970 0.949 0.970 0.970 0.952 0.947 0.922 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
71. D1054.14 prp-38 6504 7.608 0.946 0.971 0.953 0.971 0.982 0.956 0.934 0.895 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
72. C17E4.10 C17E4.10 7034 7.608 0.939 0.933 0.946 0.933 0.979 0.953 0.968 0.957
73. ZK856.12 hpo-40 7855 7.607 0.958 0.959 0.964 0.959 0.977 0.927 0.955 0.908
74. F25B3.1 ehbp-1 6409 7.606 0.940 0.961 0.948 0.961 0.980 0.968 0.943 0.905 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
75. F32H2.4 thoc-3 3861 7.606 0.923 0.972 0.957 0.972 0.970 0.948 0.936 0.928 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
76. Y38A8.3 ulp-2 7403 7.605 0.954 0.981 0.966 0.981 0.969 0.941 0.954 0.859 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
77. F48E8.6 disl-2 8774 7.604 0.938 0.944 0.964 0.944 0.977 0.953 0.944 0.940 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
78. F32E10.6 cec-5 10643 7.604 0.943 0.952 0.965 0.952 0.977 0.959 0.965 0.891 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
79. Y41D4B.19 npp-8 12992 7.604 0.954 0.974 0.975 0.974 0.922 0.930 0.932 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
80. T23H2.1 npp-12 12425 7.603 0.956 0.967 0.960 0.967 0.938 0.931 0.965 0.919 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
81. B0025.2 csn-2 5205 7.601 0.952 0.963 0.953 0.963 0.970 0.938 0.963 0.899 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
82. K07C5.8 cash-1 10523 7.601 0.960 0.963 0.967 0.963 0.954 0.951 0.928 0.915 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
83. F54C4.1 mrpl-40 2843 7.601 0.940 0.956 0.955 0.956 0.965 0.953 0.954 0.922 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]
84. F28C6.6 suf-1 3642 7.601 0.913 0.963 0.970 0.963 0.950 0.938 0.966 0.938 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
85. T01E8.6 mrps-14 9328 7.6 0.929 0.979 0.948 0.979 0.945 0.925 0.966 0.929 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
86. T05H4.6 erfa-1 12542 7.598 0.935 0.947 0.950 0.947 0.974 0.967 0.983 0.895 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
87. K08F11.3 cif-1 10218 7.598 0.956 0.938 0.937 0.938 0.950 0.947 0.980 0.952 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
88. ZK686.4 snu-23 9040 7.597 0.943 0.977 0.944 0.977 0.960 0.965 0.923 0.908 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
89. K08D12.1 pbs-1 21677 7.596 0.972 0.983 0.949 0.983 0.965 0.951 0.888 0.905 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
90. C36B1.8 gls-1 8617 7.596 0.943 0.966 0.936 0.966 0.970 0.980 0.944 0.891 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
91. R144.4 wip-1 14168 7.595 0.919 0.971 0.956 0.971 0.962 0.970 0.968 0.878 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
92. Y39G10AR.9 Y39G10AR.9 3972 7.595 0.914 0.967 0.941 0.967 0.967 0.951 0.946 0.942
93. F44A2.1 tag-153 16535 7.595 0.958 0.969 0.970 0.969 0.967 0.965 0.901 0.896
94. Y39G8C.1 xrn-1 7488 7.594 0.963 0.950 0.947 0.950 0.958 0.958 0.945 0.923 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
95. F20D12.1 csr-1 16351 7.594 0.941 0.953 0.971 0.953 0.972 0.950 0.917 0.937 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
96. CD4.6 pas-6 18332 7.594 0.950 0.982 0.944 0.982 0.956 0.963 0.912 0.905 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
97. F38H4.7 tag-30 4315 7.593 0.939 0.955 0.957 0.955 0.978 0.979 0.930 0.900
98. F46B6.3 smg-4 4959 7.592 0.959 0.973 0.960 0.973 0.944 0.934 0.943 0.906 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
99. F01G4.3 skih-2 3353 7.591 0.925 0.973 0.953 0.973 0.942 0.957 0.963 0.905 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
100. C43E11.1 acin-1 7781 7.59 0.937 0.970 0.950 0.970 0.968 0.960 0.956 0.879 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA