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Results for F54C4.1

Gene ID Gene Name Reads Transcripts Annotation
F54C4.1 mrpl-40 2843 F54C4.1 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]

Genes with expression patterns similar to F54C4.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54C4.1 mrpl-40 2843 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]
2. F23F1.1 nfyc-1 9983 7.646 0.951 0.947 0.973 0.947 0.956 0.940 0.962 0.970 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
3. F22D6.3 nars-1 18624 7.642 0.941 0.930 0.960 0.930 0.985 0.973 0.935 0.988 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
4. Y111B2A.18 rsp-3 43731 7.642 0.966 0.944 0.964 0.944 0.975 0.939 0.931 0.979 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
5. F33D4.7 emc-6 6534 7.637 0.915 0.958 0.960 0.958 0.969 0.989 0.921 0.967 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
6. F28H1.3 aars-2 13537 7.634 0.958 0.927 0.944 0.927 0.972 0.976 0.954 0.976 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
7. T12D8.8 hip-1 18283 7.63 0.948 0.961 0.942 0.961 0.963 0.941 0.941 0.973 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
8. C08B11.5 sap-49 10553 7.628 0.963 0.932 0.942 0.932 0.986 0.951 0.966 0.956 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
9. C52E4.6 cyl-1 6405 7.628 0.953 0.950 0.918 0.950 0.988 0.952 0.946 0.971 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
10. ZK686.4 snu-23 9040 7.626 0.945 0.940 0.947 0.940 0.960 0.964 0.969 0.961 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
11. K08E7.1 eak-7 18960 7.624 0.958 0.928 0.956 0.928 0.964 0.975 0.952 0.963 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
12. T10C6.4 srx-44 8454 7.623 0.953 0.956 0.949 0.956 0.965 0.956 0.946 0.942 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
13. K01G5.4 ran-1 32379 7.623 0.947 0.939 0.940 0.939 0.974 0.950 0.957 0.977 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
14. C25D7.8 otub-1 7941 7.62 0.951 0.922 0.964 0.922 0.969 0.960 0.964 0.968 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
15. K11D12.2 pqn-51 15951 7.619 0.948 0.931 0.950 0.931 0.976 0.976 0.942 0.965 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
16. C15H11.4 dhs-22 21674 7.618 0.943 0.940 0.951 0.940 0.966 0.974 0.940 0.964 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
17. F42A6.7 hrp-1 28201 7.617 0.951 0.925 0.955 0.925 0.978 0.936 0.972 0.975 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
18. T16G1.11 eif-3.K 14014 7.616 0.928 0.930 0.952 0.930 0.973 0.963 0.966 0.974 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
19. C27B7.1 spr-2 14958 7.615 0.948 0.940 0.951 0.940 0.970 0.954 0.952 0.960 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
20. T01E8.6 mrps-14 9328 7.612 0.906 0.954 0.923 0.954 0.971 0.962 0.965 0.977 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
21. T17E9.2 nmt-1 8017 7.612 0.928 0.943 0.948 0.943 0.969 0.960 0.940 0.981 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
22. W02F12.6 sna-1 7338 7.611 0.950 0.939 0.950 0.939 0.985 0.925 0.963 0.960 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
23. T10F2.4 prp-19 11298 7.61 0.944 0.946 0.975 0.946 0.970 0.936 0.937 0.956 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
24. T06A10.4 lsy-13 7631 7.608 0.940 0.943 0.938 0.943 0.977 0.955 0.951 0.961
25. C33H5.12 rsp-6 23342 7.607 0.937 0.940 0.954 0.940 0.965 0.933 0.960 0.978 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
26. T08B2.9 fars-1 12650 7.606 0.915 0.928 0.932 0.928 0.973 0.981 0.969 0.980 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
27. F32H2.4 thoc-3 3861 7.605 0.893 0.945 0.954 0.945 0.985 0.969 0.948 0.966 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
28. ZK742.1 xpo-1 20741 7.605 0.936 0.928 0.953 0.928 0.972 0.958 0.951 0.979 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
29. T12D8.3 acbp-5 6816 7.605 0.966 0.933 0.957 0.933 0.972 0.943 0.952 0.949 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
30. ZK1058.4 ccdc-47 8879 7.605 0.960 0.938 0.936 0.938 0.964 0.982 0.946 0.941 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
31. F36A2.1 cids-2 4551 7.604 0.956 0.936 0.959 0.936 0.960 0.941 0.952 0.964 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
32. F32A5.7 lsm-4 3785 7.602 0.953 0.936 0.936 0.936 0.969 0.967 0.966 0.939 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
33. Y34D9A.1 mrpl-38 5291 7.601 0.930 0.926 0.958 0.926 0.984 0.956 0.966 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
34. K08E3.8 mdt-29 4678 7.601 0.940 0.956 0.955 0.956 0.965 0.953 0.954 0.922 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
35. R12C12.2 ran-5 14517 7.6 0.938 0.927 0.964 0.927 0.957 0.962 0.974 0.951 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
36. C18D11.4 rsp-8 18308 7.599 0.952 0.938 0.945 0.938 0.959 0.944 0.942 0.981 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
37. K02F3.11 rnp-5 6205 7.598 0.942 0.935 0.956 0.935 0.969 0.942 0.946 0.973 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
38. ZK616.6 perm-3 16186 7.597 0.942 0.933 0.957 0.933 0.976 0.979 0.920 0.957 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
39. R09B3.5 mag-1 7496 7.593 0.942 0.950 0.946 0.950 0.948 0.976 0.954 0.927 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
40. Y54E5A.4 npp-4 6288 7.589 0.951 0.927 0.950 0.927 0.964 0.957 0.943 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
41. F32E10.6 cec-5 10643 7.588 0.946 0.936 0.934 0.936 0.968 0.932 0.968 0.968 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
42. B0464.7 baf-1 10161 7.587 0.924 0.947 0.931 0.947 0.941 0.964 0.974 0.959 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
43. ZK863.6 dpy-30 16177 7.587 0.957 0.938 0.969 0.938 0.940 0.954 0.915 0.976 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
44. T19B4.2 npp-7 13073 7.584 0.943 0.936 0.923 0.936 0.962 0.964 0.945 0.975 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
45. F52C9.7 mog-3 9880 7.584 0.932 0.951 0.948 0.951 0.959 0.942 0.971 0.930 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
46. T21D12.3 pqbp-1.1 5755 7.583 0.923 0.949 0.965 0.949 0.960 0.934 0.959 0.944 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
47. F26F4.10 rars-1 9971 7.582 0.940 0.926 0.949 0.926 0.979 0.969 0.948 0.945 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
48. W02B12.3 rsp-1 9235 7.578 0.944 0.931 0.961 0.931 0.964 0.929 0.947 0.971 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
49. Y38A8.3 ulp-2 7403 7.578 0.929 0.938 0.964 0.938 0.977 0.942 0.939 0.951 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
50. B0035.3 B0035.3 4118 7.577 0.945 0.921 0.933 0.921 0.956 0.978 0.976 0.947
51. Y37E3.15 npp-13 7250 7.573 0.942 0.923 0.973 0.923 0.954 0.939 0.953 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
52. Y97E10AR.5 rpb-9 3598 7.573 0.938 0.940 0.924 0.940 0.971 0.972 0.914 0.974 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
53. H17B01.4 emc-1 9037 7.57 0.913 0.933 0.920 0.933 0.967 0.970 0.951 0.983 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
54. F32H2.1 snpc-4 7581 7.569 0.924 0.946 0.942 0.946 0.951 0.937 0.973 0.950 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
55. Y40B1B.5 eif-3.J 15061 7.567 0.941 0.924 0.950 0.924 0.967 0.969 0.923 0.969 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
56. R05D11.3 ran-4 15494 7.566 0.954 0.947 0.943 0.947 0.944 0.968 0.908 0.955 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
57. T04A8.14 emb-5 11746 7.565 0.933 0.936 0.955 0.936 0.962 0.975 0.914 0.954 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
58. W01G7.3 rpb-11 7826 7.563 0.921 0.928 0.962 0.928 0.970 0.956 0.966 0.932 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
59. H19N07.1 erfa-3 19869 7.561 0.925 0.929 0.960 0.929 0.969 0.973 0.913 0.963 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
60. R07G3.5 pgam-5 11646 7.561 0.947 0.951 0.967 0.951 0.944 0.943 0.922 0.936 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
61. Y56A3A.17 npp-16 5391 7.56 0.945 0.932 0.948 0.932 0.971 0.914 0.967 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
62. F54C8.5 rheb-1 6358 7.56 0.947 0.927 0.947 0.927 0.969 0.970 0.912 0.961 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
63. F08F8.3 kap-1 31437 7.56 0.949 0.931 0.944 0.931 0.962 0.967 0.930 0.946 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
64. C39E9.14 dli-1 5650 7.551 0.935 0.948 0.936 0.948 0.969 0.966 0.882 0.967 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
65. Y46G5A.4 snrp-200 13827 7.551 0.875 0.944 0.943 0.944 0.973 0.934 0.960 0.978 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
66. C34E10.5 prmt-5 12277 7.551 0.925 0.920 0.951 0.920 0.969 0.955 0.952 0.959 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
67. C02B10.5 C02B10.5 9171 7.549 0.938 0.892 0.945 0.892 0.959 0.969 0.973 0.981
68. F56F3.1 ifet-1 25772 7.547 0.945 0.919 0.926 0.919 0.964 0.958 0.953 0.963 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
69. C18A3.5 tiar-1 25400 7.545 0.937 0.931 0.960 0.931 0.951 0.954 0.934 0.947 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
70. Y51H1A.6 mcd-1 3250 7.543 0.924 0.953 0.908 0.953 0.950 0.956 0.962 0.937 Modifier of Cell Death phenotype [Source:RefSeq peptide;Acc:NP_001254412]
71. T02G5.9 kars-1 9763 7.542 0.923 0.929 0.932 0.929 0.974 0.947 0.935 0.973 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
72. W04D2.5 mrps-11 5757 7.542 0.940 0.932 0.926 0.932 0.971 0.962 0.939 0.940 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
73. T23H2.1 npp-12 12425 7.542 0.935 0.913 0.955 0.913 0.949 0.950 0.972 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
74. F44B9.7 mdt-30 3651 7.541 0.917 0.932 0.967 0.932 0.945 0.930 0.959 0.959 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
75. Y59A8B.12 Y59A8B.12 2566 7.541 0.940 0.926 0.947 0.926 0.907 0.953 0.974 0.968
76. F59E12.11 sam-4 8179 7.54 0.959 0.913 0.960 0.913 0.946 0.960 0.938 0.951
77. F02E9.9 dpt-1 5401 7.54 0.935 0.942 0.935 0.942 0.969 0.973 0.892 0.952 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
78. R13F6.10 cra-1 11610 7.54 0.911 0.945 0.931 0.945 0.972 0.935 0.928 0.973 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
79. F45F2.11 F45F2.11 6741 7.54 0.901 0.961 0.936 0.961 0.970 0.953 0.930 0.928
80. Y54E5B.3 let-49 2437 7.539 0.943 0.928 0.939 0.928 0.978 0.965 0.914 0.944 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
81. F43G9.9 cpn-1 14505 7.539 0.955 0.948 0.956 0.948 0.939 0.914 0.951 0.928 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
82. T12G3.5 mrpl-51 5192 7.538 0.939 0.922 0.938 0.922 0.966 0.972 0.910 0.969 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
83. Y65B4BL.2 deps-1 18277 7.537 0.919 0.938 0.945 0.938 0.985 0.920 0.939 0.953
84. F58E10.3 ddx-17 15107 7.536 0.956 0.915 0.966 0.915 0.945 0.945 0.921 0.973 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
85. F10E9.7 F10E9.7 1842 7.536 0.940 0.928 0.970 0.928 0.965 0.906 0.974 0.925
86. T27F2.1 skp-1 3532 7.536 0.938 0.942 0.940 0.942 0.970 0.940 0.898 0.966 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
87. C15F1.4 ppp-1 1774 7.535 0.932 0.920 0.916 0.920 0.978 0.946 0.959 0.964 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
88. Y43F4B.4 npp-18 4780 7.534 0.923 0.910 0.921 0.910 0.960 0.974 0.963 0.973 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
89. Y47G6A.8 crn-1 3494 7.533 0.925 0.925 0.942 0.925 0.967 0.942 0.969 0.938 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
90. F37E3.1 ncbp-1 5649 7.532 0.938 0.943 0.935 0.943 0.936 0.921 0.947 0.969 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
91. D1054.15 plrg-1 2282 7.532 0.956 0.956 0.927 0.956 0.971 0.904 0.972 0.890 PLeiotropic ReGulator (vertebrate) homolog [Source:RefSeq peptide;Acc:NP_001256260]
92. R151.9 pfd-5 6951 7.53 0.920 0.937 0.952 0.937 0.941 0.974 0.914 0.955 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
93. Y116A8C.35 uaf-2 13808 7.529 0.932 0.935 0.962 0.935 0.977 0.929 0.898 0.961 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
94. R53.2 dtmk-1 6821 7.529 0.918 0.944 0.961 0.944 0.953 0.936 0.959 0.914 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
95. B0495.6 moa-2 6366 7.528 0.923 0.940 0.929 0.940 0.973 0.949 0.914 0.960
96. Y39G10AR.9 Y39G10AR.9 3972 7.527 0.906 0.930 0.934 0.930 0.978 0.976 0.908 0.965
97. Y62E10A.11 mdt-9 5971 7.527 0.923 0.941 0.962 0.941 0.921 0.947 0.952 0.940 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
98. Y71D11A.2 smr-1 4976 7.526 0.940 0.930 0.956 0.930 0.974 0.949 0.904 0.943 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
99. Y102A5A.1 cand-1 11808 7.526 0.920 0.937 0.941 0.937 0.946 0.974 0.925 0.946 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
100. C26E6.4 rpb-2 7053 7.525 0.918 0.939 0.933 0.939 0.958 0.951 0.948 0.939 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA