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Results for B0025.2

Gene ID Gene Name Reads Transcripts Annotation
B0025.2 csn-2 5205 B0025.2.1, B0025.2.2 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]

Genes with expression patterns similar to B0025.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0025.2 csn-2 5205 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
2. F42A6.7 hrp-1 28201 7.715 0.949 0.969 0.949 0.969 0.972 0.973 0.975 0.959 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
3. T12D8.8 hip-1 18283 7.705 0.922 0.966 0.956 0.966 0.969 0.983 0.974 0.969 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
4. C53D5.6 imb-3 28921 7.704 0.963 0.969 0.950 0.969 0.975 0.976 0.966 0.936 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
5. C06E7.1 sams-3 26921 7.7 0.962 0.973 0.962 0.973 0.970 0.969 0.959 0.932 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
6. F22D6.3 nars-1 18624 7.699 0.969 0.967 0.967 0.967 0.975 0.937 0.960 0.957 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
7. Y40B1B.5 eif-3.J 15061 7.696 0.943 0.971 0.953 0.971 0.968 0.959 0.964 0.967 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
8. Y111B2A.18 rsp-3 43731 7.69 0.942 0.973 0.951 0.973 0.978 0.954 0.977 0.942 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
9. Y116A8C.35 uaf-2 13808 7.688 0.941 0.966 0.960 0.966 0.978 0.976 0.953 0.948 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
10. C50C3.6 prp-8 19582 7.688 0.952 0.971 0.952 0.971 0.969 0.946 0.954 0.973 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
11. Y54E10A.9 vbh-1 28746 7.684 0.930 0.980 0.938 0.980 0.950 0.988 0.955 0.963 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
12. F26F4.10 rars-1 9971 7.682 0.956 0.937 0.966 0.937 0.976 0.972 0.989 0.949 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
13. T10F2.4 prp-19 11298 7.681 0.925 0.969 0.970 0.969 0.967 0.963 0.967 0.951 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
14. Y61A9LA.8 sut-2 11388 7.672 0.938 0.960 0.961 0.960 0.974 0.984 0.943 0.952 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
15. K01C8.10 cct-4 15077 7.67 0.965 0.959 0.957 0.959 0.962 0.978 0.954 0.936 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
16. E01A2.4 let-504 9788 7.665 0.937 0.963 0.965 0.963 0.965 0.957 0.952 0.963
17. Y47G6A.20 rnp-6 5542 7.664 0.951 0.975 0.958 0.975 0.982 0.953 0.931 0.939 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
18. K11D12.2 pqn-51 15951 7.664 0.939 0.982 0.946 0.982 0.973 0.944 0.951 0.947 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
19. F28B3.7 him-1 18274 7.661 0.945 0.964 0.969 0.964 0.973 0.959 0.953 0.934 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
20. K01G5.4 ran-1 32379 7.66 0.958 0.978 0.965 0.978 0.954 0.940 0.949 0.938 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
21. F23F1.1 nfyc-1 9983 7.659 0.948 0.974 0.965 0.974 0.948 0.929 0.968 0.953 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
22. R07G3.5 pgam-5 11646 7.658 0.937 0.970 0.968 0.970 0.939 0.981 0.961 0.932 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
23. Y34D9A.1 mrpl-38 5291 7.657 0.960 0.960 0.955 0.960 0.966 0.952 0.967 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
24. K04G2.1 iftb-1 12590 7.656 0.941 0.968 0.922 0.968 0.975 0.985 0.962 0.935 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
25. W09C5.7 W09C5.7 2359 7.655 0.926 0.946 0.949 0.946 0.980 0.984 0.990 0.934
26. F58D5.1 hrp-2 17211 7.654 0.970 0.960 0.945 0.960 0.951 0.951 0.949 0.968 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
27. Y110A7A.8 prp-31 4436 7.653 0.948 0.965 0.948 0.965 0.972 0.945 0.983 0.927 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
28. C03D6.4 npp-14 4889 7.652 0.936 0.969 0.944 0.969 0.982 0.973 0.924 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
29. F48E8.6 disl-2 8774 7.652 0.952 0.949 0.962 0.949 0.967 0.960 0.952 0.961 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
30. B0495.6 moa-2 6366 7.651 0.942 0.933 0.977 0.933 0.967 0.964 0.960 0.975
31. W02F12.6 sna-1 7338 7.651 0.939 0.971 0.935 0.971 0.976 0.954 0.952 0.953 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
32. F38H4.7 tag-30 4315 7.65 0.939 0.965 0.970 0.965 0.950 0.966 0.949 0.946
33. T04A8.14 emb-5 11746 7.648 0.942 0.987 0.973 0.987 0.951 0.937 0.949 0.922 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
34. T27F7.3 eif-1 28176 7.648 0.915 0.959 0.938 0.959 0.980 0.978 0.972 0.947 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
35. Y113G7B.23 swsn-1 13766 7.647 0.953 0.972 0.956 0.972 0.946 0.947 0.933 0.968 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
36. T08B2.9 fars-1 12650 7.647 0.943 0.962 0.926 0.962 0.976 0.946 0.988 0.944 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
37. F28B3.8 imb-1 7515 7.645 0.944 0.977 0.959 0.977 0.952 0.943 0.967 0.926 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
38. C08B11.5 sap-49 10553 7.642 0.937 0.977 0.937 0.977 0.982 0.917 0.982 0.933 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
39. C18A3.5 tiar-1 25400 7.642 0.968 0.979 0.980 0.979 0.948 0.926 0.923 0.939 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
40. F58B6.3 par-2 3914 7.641 0.920 0.967 0.956 0.967 0.953 0.958 0.957 0.963
41. T10C6.4 srx-44 8454 7.641 0.926 0.965 0.978 0.965 0.972 0.930 0.967 0.938 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
42. C15H11.4 dhs-22 21674 7.64 0.937 0.971 0.959 0.971 0.967 0.934 0.953 0.948 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
43. F36A4.7 ama-1 13620 7.64 0.929 0.965 0.954 0.965 0.964 0.988 0.945 0.930 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
44. D2089.1 rsp-7 11057 7.64 0.918 0.970 0.976 0.970 0.971 0.967 0.925 0.943 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
45. Y54E5A.4 npp-4 6288 7.64 0.929 0.978 0.949 0.978 0.948 0.937 0.965 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
46. Y46G5A.4 snrp-200 13827 7.639 0.929 0.959 0.964 0.959 0.961 0.939 0.971 0.957 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
47. T05F1.6 hsr-9 13312 7.639 0.929 0.986 0.949 0.986 0.949 0.940 0.937 0.963
48. F39B2.10 dnj-12 35162 7.638 0.955 0.978 0.948 0.978 0.939 0.961 0.949 0.930 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
49. Y105E8A.17 ekl-4 4732 7.637 0.913 0.975 0.959 0.975 0.960 0.955 0.932 0.968
50. T20H4.3 pars-1 8167 7.637 0.940 0.935 0.951 0.935 0.967 0.983 0.969 0.957 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
51. Y102A5A.1 cand-1 11808 7.637 0.912 0.977 0.958 0.977 0.951 0.952 0.957 0.953 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
52. F18E2.3 scc-3 13464 7.637 0.956 0.967 0.985 0.967 0.956 0.943 0.933 0.930 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
53. H19N07.1 erfa-3 19869 7.636 0.941 0.968 0.959 0.968 0.961 0.960 0.949 0.930 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
54. C36B1.8 gls-1 8617 7.635 0.939 0.957 0.958 0.957 0.955 0.964 0.953 0.952 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
55. F56D1.7 daz-1 23684 7.635 0.957 0.964 0.968 0.964 0.959 0.928 0.963 0.932 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
56. F41E6.4 smk-1 22394 7.634 0.947 0.973 0.982 0.973 0.948 0.960 0.914 0.937 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
57. C36B1.3 rpb-3 4442 7.633 0.950 0.967 0.958 0.967 0.977 0.934 0.957 0.923 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
58. C52E4.6 cyl-1 6405 7.633 0.946 0.967 0.959 0.967 0.981 0.939 0.967 0.907 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
59. C18D11.4 rsp-8 18308 7.632 0.913 0.960 0.936 0.960 0.973 0.961 0.962 0.967 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
60. C18G1.5 hil-4 21692 7.632 0.923 0.974 0.955 0.974 0.957 0.944 0.956 0.949 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
61. D1081.9 D1081.9 3792 7.631 0.954 0.948 0.977 0.948 0.967 0.956 0.942 0.939
62. C25D7.8 otub-1 7941 7.63 0.947 0.971 0.970 0.971 0.956 0.935 0.947 0.933 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
63. T05E8.3 let-355 8169 7.629 0.925 0.969 0.966 0.969 0.939 0.969 0.947 0.945
64. R13F6.10 cra-1 11610 7.629 0.930 0.971 0.949 0.971 0.963 0.945 0.952 0.948 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
65. C43E11.1 acin-1 7781 7.629 0.930 0.961 0.958 0.961 0.966 0.962 0.947 0.944 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
66. T07D4.3 rha-1 5898 7.627 0.912 0.964 0.955 0.964 0.973 0.976 0.943 0.940 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
67. F32H2.4 thoc-3 3861 7.624 0.924 0.977 0.953 0.977 0.983 0.898 0.959 0.953 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
68. T10F2.1 gars-1 7204 7.624 0.957 0.949 0.966 0.949 0.961 0.975 0.929 0.938 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
69. F36F2.3 rbpl-1 15376 7.624 0.909 0.962 0.967 0.962 0.975 0.977 0.907 0.965 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
70. F45H11.2 ned-8 13247 7.624 0.936 0.951 0.917 0.951 0.968 0.989 0.958 0.954 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
71. T01G9.4 npp-2 5361 7.624 0.949 0.974 0.949 0.974 0.950 0.922 0.954 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
72. Y71F9B.16 dnj-30 4262 7.623 0.924 0.961 0.957 0.961 0.961 0.954 0.951 0.954 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
73. Y48G8AL.6 smg-2 12561 7.622 0.927 0.951 0.964 0.951 0.952 0.980 0.952 0.945 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
74. W03F9.5 ttb-1 8682 7.622 0.940 0.970 0.965 0.970 0.940 0.953 0.949 0.935 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
75. F56D2.6 ddx-15 12282 7.619 0.964 0.964 0.951 0.964 0.929 0.930 0.957 0.960 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
76. W01G7.3 rpb-11 7826 7.619 0.952 0.959 0.974 0.959 0.954 0.916 0.965 0.940 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
77. F08F8.3 kap-1 31437 7.619 0.952 0.978 0.946 0.978 0.966 0.918 0.949 0.932 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
78. F37E3.1 ncbp-1 5649 7.618 0.957 0.961 0.960 0.961 0.923 0.970 0.959 0.927 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
79. K08F11.3 cif-1 10218 7.618 0.951 0.940 0.929 0.940 0.968 0.969 0.977 0.944 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
80. EEED8.5 mog-5 4698 7.617 0.894 0.975 0.973 0.975 0.963 0.941 0.968 0.928 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
81. K08D12.1 pbs-1 21677 7.616 0.959 0.980 0.960 0.980 0.931 0.949 0.905 0.952 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
82. B0511.10 eif-3.E 10041 7.616 0.918 0.955 0.939 0.955 0.970 0.970 0.972 0.937 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
83. ZK616.6 perm-3 16186 7.615 0.918 0.964 0.951 0.964 0.962 0.942 0.969 0.945 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
84. F45H11.3 hpo-35 8299 7.615 0.936 0.969 0.961 0.969 0.954 0.957 0.970 0.899
85. ZK328.2 eftu-2 7040 7.614 0.944 0.978 0.975 0.978 0.932 0.939 0.935 0.933 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
86. Y39G10AR.9 Y39G10AR.9 3972 7.614 0.922 0.963 0.921 0.963 0.966 0.954 0.965 0.960
87. K10C3.2 ensa-1 19836 7.614 0.936 0.968 0.945 0.968 0.952 0.930 0.949 0.966 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
88. B0464.1 dars-1 12331 7.614 0.925 0.946 0.929 0.946 0.970 0.985 0.982 0.931 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
89. T12D8.2 drr-2 16208 7.614 0.929 0.945 0.956 0.945 0.962 0.971 0.965 0.941 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
90. K10D2.3 cid-1 7175 7.613 0.941 0.972 0.972 0.972 0.969 0.954 0.919 0.914 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
91. W02B12.3 rsp-1 9235 7.612 0.958 0.972 0.969 0.972 0.936 0.915 0.950 0.940 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
92. CD4.6 pas-6 18332 7.612 0.947 0.976 0.955 0.976 0.932 0.956 0.928 0.942 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
93. C39E9.14 dli-1 5650 7.611 0.939 0.961 0.948 0.961 0.973 0.945 0.932 0.952 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
94. F56A8.6 cpf-2 2730 7.611 0.915 0.973 0.952 0.973 0.973 0.943 0.937 0.945 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
95. D1054.14 prp-38 6504 7.611 0.950 0.981 0.960 0.981 0.972 0.930 0.885 0.952 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
96. Y73F8A.34 tag-349 7966 7.61 0.941 0.964 0.958 0.964 0.951 0.938 0.947 0.947
97. T19B4.2 npp-7 13073 7.61 0.923 0.978 0.951 0.978 0.952 0.897 0.964 0.967 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
98. K07A12.7 mrps-15 6325 7.61 0.916 0.941 0.918 0.941 0.985 0.977 0.979 0.953 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
99. C39E9.13 rfc-3 9443 7.609 0.929 0.965 0.943 0.965 0.975 0.948 0.965 0.919 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
100. F32H2.1 snpc-4 7581 7.609 0.978 0.965 0.968 0.965 0.923 0.923 0.940 0.947 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA