C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y37E3.15

Gene ID Gene Name Reads Transcripts Annotation
Y37E3.15 npp-13 7250 Y37E3.15a, Y37E3.15b, Y37E3.15c Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]

Genes with expression patterns similar to Y37E3.15

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y37E3.15 npp-13 7250 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
2. T23H2.1 npp-12 12425 7.804 0.981 0.986 0.959 0.986 0.983 0.977 0.974 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
3. Y54E5A.4 npp-4 6288 7.796 0.960 0.980 0.966 0.980 0.979 0.958 0.986 0.987 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
4. K01G5.4 ran-1 32379 7.785 0.984 0.979 0.951 0.979 0.970 0.989 0.965 0.968 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
5. C26E6.4 rpb-2 7053 7.781 0.967 0.976 0.964 0.976 0.972 0.976 0.984 0.966 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
6. R12C12.2 ran-5 14517 7.781 0.966 0.976 0.964 0.976 0.990 0.982 0.975 0.952 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
7. Y53C12B.3 nos-3 20231 7.78 0.959 0.978 0.971 0.978 0.986 0.971 0.968 0.969 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
8. F28H1.3 aars-2 13537 7.777 0.969 0.969 0.966 0.969 0.982 0.969 0.975 0.978 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
9. F58D5.1 hrp-2 17211 7.776 0.972 0.965 0.966 0.965 0.964 0.990 0.976 0.978 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
10. F56D2.6 ddx-15 12282 7.769 0.960 0.968 0.959 0.968 0.981 0.984 0.966 0.983 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
11. Y46G5A.4 snrp-200 13827 7.769 0.949 0.968 0.964 0.968 0.969 0.987 0.977 0.987 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
12. Y17G7A.1 hmg-12 29989 7.768 0.974 0.978 0.963 0.978 0.990 0.966 0.957 0.962 HMG [Source:RefSeq peptide;Acc:NP_496544]
13. F42A6.7 hrp-1 28201 7.766 0.976 0.980 0.976 0.980 0.961 0.962 0.969 0.962 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
14. Y116A8C.42 snr-1 17062 7.763 0.952 0.969 0.970 0.969 0.993 0.973 0.969 0.968 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
15. Y71G12B.9 lin-65 7476 7.761 0.967 0.970 0.964 0.970 0.978 0.981 0.972 0.959 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
16. ZK742.1 xpo-1 20741 7.754 0.959 0.987 0.965 0.987 0.976 0.952 0.960 0.968 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
17. F59E12.11 sam-4 8179 7.753 0.940 0.969 0.966 0.969 0.980 0.975 0.972 0.982
18. F59A2.1 npp-9 34375 7.753 0.987 0.975 0.956 0.975 0.985 0.951 0.959 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
19. F23F1.1 nfyc-1 9983 7.747 0.983 0.968 0.967 0.968 0.968 0.956 0.959 0.978 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
20. Y41D4B.19 npp-8 12992 7.741 0.980 0.977 0.973 0.977 0.967 0.957 0.973 0.937 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
21. B0035.3 B0035.3 4118 7.74 0.975 0.978 0.949 0.978 0.978 0.959 0.960 0.963
22. F32H2.1 snpc-4 7581 7.737 0.976 0.966 0.943 0.966 0.980 0.976 0.966 0.964 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
23. Y37D8A.11 cec-7 8801 7.737 0.961 0.978 0.978 0.978 0.985 0.934 0.963 0.960 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
24. ZK328.2 eftu-2 7040 7.737 0.950 0.977 0.947 0.977 0.979 0.980 0.957 0.970 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
25. T23B5.1 prmt-3 10677 7.736 0.967 0.971 0.966 0.971 0.983 0.948 0.969 0.961 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
26. Y37D8A.9 mrg-1 14369 7.734 0.971 0.968 0.936 0.968 0.987 0.972 0.963 0.969 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
27. F52C9.7 mog-3 9880 7.732 0.966 0.958 0.962 0.958 0.984 0.979 0.983 0.942 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
28. F33D4.5 mrpl-1 5337 7.732 0.953 0.960 0.954 0.960 0.972 0.983 0.978 0.972 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
29. T10F2.4 prp-19 11298 7.722 0.950 0.981 0.981 0.981 0.948 0.961 0.949 0.971 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
30. C27B7.1 spr-2 14958 7.722 0.960 0.974 0.949 0.974 0.971 0.955 0.961 0.978 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
31. F01F1.7 ddx-23 4217 7.717 0.952 0.969 0.892 0.969 0.982 0.990 0.983 0.980 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
32. F58E10.3 ddx-17 15107 7.716 0.981 0.962 0.971 0.962 0.959 0.944 0.947 0.990 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
33. T16G1.11 eif-3.K 14014 7.715 0.956 0.960 0.973 0.960 0.962 0.977 0.966 0.961 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
34. W02B12.3 rsp-1 9235 7.714 0.978 0.970 0.963 0.970 0.957 0.970 0.939 0.967 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
35. W06H3.3 ctps-1 8363 7.712 0.930 0.963 0.974 0.963 0.989 0.978 0.967 0.948 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
36. T28D9.10 snr-3 9995 7.71 0.950 0.963 0.958 0.963 0.985 0.956 0.944 0.991 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
37. Y38A8.3 ulp-2 7403 7.708 0.969 0.952 0.975 0.952 0.974 0.960 0.976 0.950 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
38. C08B11.5 sap-49 10553 7.708 0.966 0.979 0.962 0.979 0.958 0.952 0.964 0.948 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
39. T19B4.2 npp-7 13073 7.707 0.957 0.971 0.954 0.971 0.965 0.958 0.961 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
40. C26D10.1 ran-3 11111 7.707 0.963 0.982 0.967 0.982 0.969 0.970 0.965 0.909 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
41. T12E12.2 cec-6 4758 7.7 0.954 0.962 0.974 0.962 0.970 0.962 0.976 0.940 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
42. C26D10.2 hel-1 28697 7.7 0.956 0.980 0.976 0.980 0.925 0.966 0.936 0.981 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
43. W02F12.6 sna-1 7338 7.7 0.960 0.964 0.938 0.964 0.976 0.964 0.962 0.972 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
44. R13F6.10 cra-1 11610 7.698 0.949 0.964 0.971 0.964 0.961 0.979 0.942 0.968 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
45. F22D6.3 nars-1 18624 7.697 0.963 0.971 0.979 0.971 0.954 0.979 0.908 0.972 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
46. K08F4.2 gtbp-1 25222 7.697 0.954 0.968 0.968 0.968 0.970 0.955 0.934 0.980 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
47. C48B4.11 C48B4.11 4384 7.695 0.962 0.970 0.942 0.970 0.977 0.949 0.964 0.961
48. ZK1010.3 frg-1 3533 7.694 0.979 0.958 0.977 0.958 0.986 0.935 0.935 0.966 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
49. C25D7.8 otub-1 7941 7.692 0.967 0.960 0.976 0.960 0.979 0.937 0.960 0.953 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
50. R07E5.14 rnp-4 11659 7.692 0.964 0.968 0.950 0.968 0.986 0.950 0.933 0.973 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
51. Y39G10AR.7 ekl-7 7072 7.691 0.955 0.977 0.935 0.977 0.972 0.954 0.942 0.979
52. F28C6.6 suf-1 3642 7.69 0.935 0.977 0.984 0.977 0.986 0.955 0.953 0.923 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
53. K08E7.1 eak-7 18960 7.689 0.951 0.979 0.960 0.979 0.982 0.926 0.951 0.961 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
54. C34E10.5 prmt-5 12277 7.689 0.953 0.963 0.972 0.963 0.975 0.964 0.966 0.933 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
55. Y65B4BL.2 deps-1 18277 7.688 0.965 0.973 0.950 0.973 0.970 0.963 0.936 0.958
56. T28D9.2 rsp-5 6460 7.687 0.976 0.958 0.951 0.958 0.960 0.932 0.984 0.968 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
57. F43G9.9 cpn-1 14505 7.686 0.947 0.954 0.963 0.954 0.970 0.980 0.965 0.953 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
58. C02B10.5 C02B10.5 9171 7.683 0.964 0.948 0.946 0.948 0.975 0.960 0.960 0.982
59. F58F6.4 rfc-2 2074 7.68 0.956 0.960 0.921 0.960 0.983 0.960 0.977 0.963 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
60. F32A5.7 lsm-4 3785 7.68 0.975 0.958 0.953 0.958 0.962 0.935 0.968 0.971 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
61. K12C11.2 smo-1 12784 7.68 0.979 0.952 0.935 0.952 0.981 0.952 0.970 0.959 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
62. F29C4.6 tut-1 5637 7.679 0.924 0.953 0.966 0.953 0.979 0.959 0.976 0.969 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
63. ZK863.6 dpy-30 16177 7.679 0.955 0.974 0.982 0.974 0.971 0.943 0.923 0.957 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
64. B0464.7 baf-1 10161 7.678 0.944 0.957 0.949 0.957 0.972 0.962 0.973 0.964 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
65. C01F6.8 icln-1 6586 7.677 0.968 0.957 0.981 0.957 0.987 0.976 0.944 0.907 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
66. F53F10.5 npp-11 3378 7.677 0.959 0.965 0.939 0.965 0.975 0.948 0.956 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
67. F10E9.7 F10E9.7 1842 7.675 0.970 0.927 0.965 0.927 0.991 0.959 0.981 0.955
68. Y23H5B.6 Y23H5B.6 5886 7.675 0.963 0.956 0.961 0.956 0.979 0.944 0.954 0.962
69. F36A2.1 cids-2 4551 7.674 0.968 0.961 0.949 0.961 0.951 0.976 0.970 0.938 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
70. Y34D9A.1 mrpl-38 5291 7.674 0.956 0.968 0.950 0.968 0.942 0.967 0.963 0.960 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
71. T01E8.6 mrps-14 9328 7.672 0.939 0.966 0.968 0.966 0.972 0.939 0.975 0.947 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
72. T25G3.4 T25G3.4 9394 7.672 0.949 0.964 0.956 0.964 0.968 0.966 0.950 0.955 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
73. F53F4.3 tbcb-1 6442 7.671 0.967 0.978 0.955 0.978 0.974 0.955 0.935 0.929 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
74. K11D12.2 pqn-51 15951 7.671 0.955 0.974 0.963 0.974 0.966 0.945 0.949 0.945 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
75. B0205.11 mrpl-9 9162 7.671 0.914 0.962 0.964 0.962 0.982 0.966 0.959 0.962 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
76. F58B3.5 mars-1 6729 7.67 0.952 0.939 0.952 0.939 0.986 0.972 0.958 0.972 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
77. F32E10.6 cec-5 10643 7.67 0.981 0.954 0.946 0.954 0.963 0.973 0.938 0.961 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
78. E01A2.4 let-504 9788 7.667 0.956 0.978 0.919 0.978 0.965 0.946 0.963 0.962
79. Y62E10A.11 mdt-9 5971 7.666 0.952 0.981 0.967 0.981 0.974 0.944 0.966 0.901 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
80. ZK1128.6 ttll-4 6059 7.665 0.966 0.972 0.953 0.972 0.968 0.931 0.948 0.955 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
81. W01G7.3 rpb-11 7826 7.664 0.938 0.951 0.950 0.951 0.961 0.962 0.977 0.974 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
82. C14A4.4 crn-3 6558 7.664 0.948 0.963 0.960 0.963 0.947 0.978 0.947 0.958 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
83. K06A5.7 cdc-25.1 14961 7.662 0.919 0.956 0.917 0.956 0.983 0.982 0.974 0.975 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
84. T02G5.9 kars-1 9763 7.659 0.913 0.951 0.958 0.951 0.981 0.982 0.947 0.976 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
85. C27H5.3 fust-1 6978 7.658 0.948 0.945 0.966 0.945 0.952 0.981 0.941 0.980 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
86. B0464.2 ctr-9 7610 7.658 0.926 0.970 0.933 0.970 0.967 0.990 0.928 0.974 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
87. ZK686.4 snu-23 9040 7.658 0.960 0.950 0.943 0.950 0.967 0.979 0.938 0.971 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
88. B0511.8 mrps-30 5050 7.654 0.926 0.941 0.959 0.941 0.977 0.976 0.984 0.950 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
89. Y73B6BL.32 lsm-8 11002 7.653 0.939 0.971 0.964 0.971 0.982 0.935 0.953 0.938 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
90. Y37H2A.5 fbxa-210 2230 7.652 0.955 0.952 0.969 0.952 0.958 0.954 0.966 0.946 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
91. Y56A3A.17 npp-16 5391 7.651 0.979 0.947 0.957 0.947 0.958 0.974 0.953 0.936 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
92. F28B3.8 imb-1 7515 7.651 0.973 0.958 0.949 0.958 0.944 0.937 0.972 0.960 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
93. C43E11.1 acin-1 7781 7.651 0.962 0.983 0.963 0.983 0.934 0.962 0.893 0.971 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
94. Y18D10A.1 attf-6 6942 7.65 0.924 0.963 0.965 0.963 0.956 0.975 0.943 0.961 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
95. F26F4.11 rpb-8 7601 7.649 0.916 0.986 0.969 0.986 0.990 0.939 0.931 0.932 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
96. K02F2.4 ulp-5 3433 7.649 0.958 0.948 0.928 0.948 0.990 0.963 0.981 0.933 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
97. R53.2 dtmk-1 6821 7.649 0.961 0.963 0.981 0.963 0.977 0.952 0.930 0.922 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
98. Y55F3AM.12 dcap-1 8679 7.648 0.950 0.971 0.952 0.971 0.965 0.989 0.900 0.950 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
99. F32H2.4 thoc-3 3861 7.648 0.935 0.970 0.966 0.970 0.952 0.947 0.937 0.971 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
100. T05E8.3 let-355 8169 7.648 0.928 0.980 0.968 0.980 0.951 0.937 0.933 0.971

There are 2757 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA