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Results for F28B3.7

Gene ID Gene Name Reads Transcripts Annotation
F28B3.7 him-1 18274 F28B3.7a, F28B3.7b Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]

Genes with expression patterns similar to F28B3.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28B3.7 him-1 18274 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
2. Y65B4BL.2 deps-1 18277 7.813 0.984 0.983 0.987 0.983 0.965 0.970 0.974 0.967
3. D2030.6 prg-1 26751 7.773 0.963 0.974 0.986 0.974 0.988 0.978 0.973 0.937 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
4. Y46G5A.4 snrp-200 13827 7.771 0.964 0.978 0.984 0.978 0.972 0.976 0.956 0.963 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
5. T04A8.14 emb-5 11746 7.769 0.974 0.975 0.977 0.975 0.971 0.983 0.953 0.961 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
6. T05F1.6 hsr-9 13312 7.766 0.966 0.983 0.989 0.983 0.978 0.949 0.978 0.940
7. F18E2.3 scc-3 13464 7.764 0.977 0.986 0.983 0.986 0.973 0.960 0.968 0.931 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
8. Y61A9LA.8 sut-2 11388 7.764 0.960 0.978 0.966 0.978 0.990 0.972 0.966 0.954 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
9. F23F1.1 nfyc-1 9983 7.761 0.971 0.974 0.985 0.974 0.949 0.979 0.960 0.969 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
10. F22D6.3 nars-1 18624 7.739 0.929 0.986 0.965 0.986 0.973 0.982 0.953 0.965 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
11. D2089.1 rsp-7 11057 7.735 0.964 0.981 0.980 0.981 0.956 0.978 0.923 0.972 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
12. C36B1.8 gls-1 8617 7.734 0.968 0.973 0.968 0.973 0.974 0.971 0.957 0.950 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
13. E01A2.4 let-504 9788 7.734 0.960 0.979 0.961 0.979 0.987 0.975 0.939 0.954
14. C50C3.6 prp-8 19582 7.729 0.961 0.972 0.980 0.972 0.983 0.971 0.936 0.954 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
15. F10G8.3 rae-1 7542 7.728 0.929 0.975 0.977 0.975 0.983 0.984 0.957 0.948 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
16. Y17G7A.1 hmg-12 29989 7.728 0.967 0.989 0.976 0.989 0.943 0.954 0.962 0.948 HMG [Source:RefSeq peptide;Acc:NP_496544]
17. F32E10.6 cec-5 10643 7.727 0.962 0.953 0.967 0.953 0.980 0.975 0.972 0.965 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
18. F56D1.7 daz-1 23684 7.724 0.962 0.970 0.983 0.970 0.985 0.963 0.960 0.931 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
19. C43E11.1 acin-1 7781 7.723 0.958 0.983 0.969 0.983 0.973 0.980 0.971 0.906 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
20. C27B7.1 spr-2 14958 7.721 0.949 0.982 0.981 0.982 0.955 0.964 0.950 0.958 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
21. F22D6.5 prpf-4 9522 7.72 0.959 0.976 0.960 0.976 0.969 0.965 0.966 0.949 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
22. T01G1.3 sec-31 10504 7.718 0.966 0.989 0.977 0.989 0.964 0.968 0.916 0.949 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
23. Y38A8.3 ulp-2 7403 7.714 0.976 0.972 0.985 0.972 0.969 0.964 0.924 0.952 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
24. C06E7.1 sams-3 26921 7.713 0.946 0.977 0.978 0.977 0.973 0.967 0.979 0.916 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
25. Y54E10A.9 vbh-1 28746 7.713 0.917 0.982 0.960 0.982 0.973 0.964 0.969 0.966 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
26. F37E3.1 ncbp-1 5649 7.71 0.972 0.972 0.966 0.972 0.940 0.972 0.961 0.955 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
27. F41E6.4 smk-1 22394 7.71 0.983 0.984 0.989 0.984 0.968 0.951 0.933 0.918 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
28. F56A3.3 npp-6 5425 7.709 0.958 0.976 0.976 0.976 0.954 0.953 0.955 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
29. F01G4.3 skih-2 3353 7.709 0.960 0.976 0.961 0.976 0.957 0.959 0.963 0.957 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
30. D1054.14 prp-38 6504 7.709 0.930 0.978 0.979 0.978 0.971 0.979 0.922 0.972 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
31. F46A9.4 skr-2 16831 7.708 0.946 0.966 0.972 0.966 0.984 0.968 0.971 0.935 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
32. F28C6.6 suf-1 3642 7.707 0.975 0.983 0.967 0.983 0.952 0.985 0.966 0.896 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
33. B0035.3 B0035.3 4118 7.707 0.970 0.970 0.981 0.970 0.947 0.983 0.958 0.928
34. Y105E8A.17 ekl-4 4732 7.704 0.946 0.979 0.956 0.979 0.986 0.970 0.947 0.941
35. Y113G7B.23 swsn-1 13766 7.704 0.952 0.974 0.978 0.974 0.954 0.974 0.952 0.946 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
36. C02B10.5 C02B10.5 9171 7.704 0.945 0.960 0.972 0.960 0.950 0.980 0.971 0.966
37. C05C8.6 hpo-9 8263 7.704 0.981 0.981 0.971 0.981 0.946 0.956 0.935 0.953
38. D1081.8 cdc-5L 8553 7.702 0.955 0.978 0.977 0.978 0.954 0.958 0.949 0.953 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
39. F36A4.7 ama-1 13620 7.702 0.944 0.974 0.979 0.974 0.972 0.980 0.951 0.928 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
40. EEED8.5 mog-5 4698 7.702 0.927 0.977 0.977 0.977 0.968 0.957 0.938 0.981 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
41. C34E10.5 prmt-5 12277 7.7 0.946 0.977 0.979 0.977 0.970 0.984 0.950 0.917 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
42. Y73F8A.34 tag-349 7966 7.699 0.955 0.948 0.975 0.948 0.957 0.974 0.970 0.972
43. W02B12.3 rsp-1 9235 7.699 0.949 0.957 0.981 0.957 0.939 0.967 0.984 0.965 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
44. F46B6.3 smg-4 4959 7.699 0.962 0.962 0.979 0.962 0.965 0.968 0.940 0.961 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
45. C53D5.6 imb-3 28921 7.699 0.927 0.982 0.960 0.982 0.988 0.968 0.980 0.912 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
46. F48E8.6 disl-2 8774 7.698 0.964 0.977 0.970 0.977 0.984 0.950 0.951 0.925 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
47. Y39G10AR.7 ekl-7 7072 7.696 0.969 0.978 0.970 0.978 0.959 0.958 0.927 0.957
48. T07D4.3 rha-1 5898 7.694 0.955 0.967 0.970 0.967 0.967 0.976 0.940 0.952 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
49. T01G9.4 npp-2 5361 7.691 0.968 0.974 0.981 0.974 0.965 0.932 0.937 0.960 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
50. Y37A1B.1 lst-3 10739 7.69 0.958 0.975 0.985 0.975 0.955 0.960 0.950 0.932 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
51. T05C3.5 dnj-19 20420 7.69 0.950 0.980 0.953 0.980 0.966 0.969 0.967 0.925 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
52. F36A2.1 cids-2 4551 7.687 0.953 0.971 0.957 0.971 0.957 0.977 0.958 0.943 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
53. C36B1.3 rpb-3 4442 7.686 0.912 0.962 0.977 0.962 0.971 0.981 0.950 0.971 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
54. T07C4.10 T07C4.10 1563 7.686 0.945 0.968 0.987 0.968 0.940 0.963 0.962 0.953
55. T20G5.11 rde-4 3966 7.686 0.965 0.939 0.989 0.939 0.963 0.972 0.971 0.948 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
56. F58A4.8 tbg-1 2839 7.685 0.947 0.966 0.959 0.966 0.974 0.970 0.940 0.963 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
57. K01C8.10 cct-4 15077 7.683 0.966 0.983 0.960 0.983 0.973 0.933 0.967 0.918 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
58. F56D2.6 ddx-15 12282 7.683 0.961 0.983 0.971 0.983 0.952 0.966 0.956 0.911 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
59. Y34D9A.1 mrpl-38 5291 7.683 0.930 0.974 0.955 0.974 0.950 0.987 0.963 0.950 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
60. Y54E5A.4 npp-4 6288 7.682 0.935 0.981 0.979 0.981 0.971 0.982 0.918 0.935 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
61. Y56A3A.17 npp-16 5391 7.681 0.950 0.969 0.974 0.969 0.981 0.969 0.929 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
62. Y47G6A.20 rnp-6 5542 7.679 0.947 0.970 0.974 0.970 0.972 0.974 0.958 0.914 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
63. D1081.9 D1081.9 3792 7.678 0.957 0.960 0.971 0.960 0.980 0.958 0.955 0.937
64. F28D9.1 rsr-1 4282 7.677 0.969 0.987 0.952 0.987 0.961 0.969 0.932 0.920 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
65. C08B11.6 arp-6 4646 7.677 0.938 0.952 0.966 0.952 0.986 0.980 0.976 0.927 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
66. K11D12.2 pqn-51 15951 7.677 0.951 0.978 0.974 0.978 0.981 0.979 0.915 0.921 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
67. F32E10.4 ima-3 35579 7.676 0.933 0.981 0.972 0.981 0.957 0.968 0.924 0.960 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
68. H19N07.1 erfa-3 19869 7.676 0.920 0.978 0.954 0.978 0.979 0.984 0.950 0.933 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
69. W02D9.1 pri-2 6048 7.676 0.951 0.971 0.968 0.971 0.966 0.944 0.962 0.943 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
70. F32H2.4 thoc-3 3861 7.674 0.951 0.955 0.990 0.955 0.969 0.977 0.939 0.938 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
71. B0041.7 xnp-1 9187 7.673 0.958 0.983 0.963 0.983 0.954 0.975 0.951 0.906 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
72. R02D3.5 fnta-1 5258 7.672 0.944 0.969 0.979 0.969 0.970 0.959 0.927 0.955 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
73. C25D7.8 otub-1 7941 7.671 0.944 0.976 0.980 0.976 0.962 0.977 0.937 0.919 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
74. Y48G8AL.6 smg-2 12561 7.671 0.962 0.980 0.958 0.980 0.966 0.975 0.930 0.920 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
75. T10F2.4 prp-19 11298 7.671 0.934 0.977 0.976 0.977 0.976 0.980 0.947 0.904 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
76. T10C6.4 srx-44 8454 7.67 0.931 0.959 0.983 0.959 0.970 0.978 0.965 0.925 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
77. T06A10.4 lsy-13 7631 7.669 0.912 0.973 0.974 0.973 0.957 0.961 0.929 0.990
78. R119.4 pqn-59 16065 7.669 0.969 0.939 0.973 0.939 0.967 0.978 0.957 0.947 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
79. C18G1.5 hil-4 21692 7.669 0.946 0.955 0.967 0.955 0.971 0.965 0.978 0.932 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
80. C18D11.4 rsp-8 18308 7.668 0.925 0.964 0.943 0.964 0.974 0.971 0.968 0.959 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
81. K01G5.4 ran-1 32379 7.667 0.956 0.979 0.957 0.979 0.952 0.978 0.919 0.947 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
82. Y71F9B.16 dnj-30 4262 7.667 0.909 0.963 0.967 0.963 0.957 0.978 0.977 0.953 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
83. R13F6.10 cra-1 11610 7.667 0.938 0.975 0.941 0.975 0.975 0.978 0.938 0.947 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
84. T26A5.5 jhdm-1 12698 7.666 0.978 0.979 0.982 0.979 0.982 0.975 0.933 0.858 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
85. T17E9.1 kin-18 8172 7.666 0.971 0.964 0.978 0.964 0.940 0.941 0.963 0.945 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
86. B0464.2 ctr-9 7610 7.665 0.948 0.977 0.956 0.977 0.939 0.973 0.961 0.934 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
87. K02F2.3 teg-4 3873 7.664 0.952 0.988 0.955 0.988 0.952 0.962 0.952 0.915 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
88. F42A6.7 hrp-1 28201 7.663 0.937 0.978 0.973 0.978 0.958 0.976 0.948 0.915 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
89. ZK1098.8 mut-7 4940 7.663 0.955 0.958 0.977 0.958 0.981 0.959 0.933 0.942 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
90. C39E9.13 rfc-3 9443 7.662 0.926 0.965 0.959 0.965 0.970 0.949 0.963 0.965 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
91. K08F11.5 miro-1 4512 7.661 0.978 0.960 0.955 0.960 0.949 0.980 0.961 0.918 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
92. B0025.2 csn-2 5205 7.661 0.945 0.964 0.969 0.964 0.973 0.959 0.953 0.934 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
93. ZK381.4 pgl-1 20651 7.66 0.938 0.983 0.973 0.983 0.949 0.949 0.969 0.916 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
94. F36F2.3 rbpl-1 15376 7.66 0.935 0.982 0.965 0.982 0.978 0.950 0.947 0.921 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
95. T16G1.11 eif-3.K 14014 7.66 0.926 0.970 0.941 0.970 0.965 0.975 0.967 0.946 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
96. C28H8.9 dpff-1 8684 7.659 0.966 0.964 0.963 0.964 0.965 0.983 0.942 0.912 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
97. Y54E2A.3 tac-1 6308 7.659 0.936 0.956 0.942 0.956 0.981 0.986 0.939 0.963 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
98. K03H1.2 mog-1 4057 7.659 0.968 0.974 0.964 0.974 0.976 0.990 0.951 0.862 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
99. C03D6.4 npp-14 4889 7.659 0.939 0.969 0.949 0.969 0.957 0.965 0.949 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
100. C48E7.3 lpd-2 10330 7.657 0.939 0.974 0.981 0.974 0.986 0.979 0.904 0.920 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA