C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F41E6.4

Gene ID Gene Name Reads Transcripts Annotation
F41E6.4 smk-1 22394 F41E6.4a, F41E6.4b, F41E6.4c SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]

Genes with expression patterns similar to F41E6.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F41E6.4 smk-1 22394 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
2. F18E2.3 scc-3 13464 7.813 0.976 0.988 0.985 0.988 0.991 0.966 0.970 0.949 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
3. F38A5.13 dnj-11 19678 7.786 0.973 0.980 0.980 0.980 0.989 0.976 0.959 0.949 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
4. Y48G8AL.6 smg-2 12561 7.783 0.974 0.974 0.966 0.974 0.978 0.983 0.963 0.971 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
5. T21E12.4 dhc-1 20370 7.778 0.965 0.985 0.978 0.985 0.993 0.970 0.942 0.960 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
6. F16D3.2 rsd-6 8211 7.778 0.930 0.972 0.985 0.972 0.988 0.985 0.984 0.962
7. K08D12.1 pbs-1 21677 7.776 0.946 0.981 0.975 0.981 0.983 0.984 0.961 0.965 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
8. Y55D9A.1 efa-6 10012 7.776 0.930 0.980 0.978 0.980 0.989 0.986 0.977 0.956 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
9. W03F9.5 ttb-1 8682 7.772 0.956 0.977 0.977 0.977 0.975 0.991 0.958 0.961 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
10. K07C5.8 cash-1 10523 7.767 0.962 0.972 0.974 0.972 0.983 0.973 0.968 0.963 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
11. F32A5.1 ada-2 8343 7.762 0.970 0.974 0.974 0.974 0.978 0.987 0.946 0.959 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
12. F44A2.1 tag-153 16535 7.762 0.973 0.984 0.972 0.984 0.976 0.969 0.964 0.940
13. D2089.1 rsp-7 11057 7.761 0.962 0.977 0.984 0.977 0.977 0.983 0.960 0.941 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
14. T20H4.4 adr-2 5495 7.758 0.960 0.966 0.975 0.966 0.985 0.977 0.974 0.955 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
15. M106.1 mix-1 7950 7.757 0.962 0.985 0.977 0.985 0.984 0.952 0.965 0.947 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
16. Y92C3B.2 uaf-1 14981 7.754 0.951 0.979 0.959 0.979 0.989 0.973 0.957 0.967 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
17. T06D8.6 cchl-1 26292 7.749 0.938 0.975 0.968 0.975 0.991 0.981 0.972 0.949 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
18. F48E8.6 disl-2 8774 7.743 0.967 0.968 0.971 0.968 0.975 0.981 0.953 0.960 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
19. F39H11.5 pbs-7 13631 7.737 0.918 0.983 0.971 0.983 0.989 0.983 0.943 0.967 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
20. K01C8.10 cct-4 15077 7.735 0.966 0.976 0.958 0.976 0.963 0.964 0.970 0.962 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
21. T10F2.3 ulp-1 8351 7.731 0.946 0.983 0.951 0.983 0.992 0.986 0.958 0.932 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
22. C32E8.11 ubr-1 10338 7.731 0.968 0.959 0.960 0.959 0.984 0.968 0.959 0.974 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
23. C07G1.4 wsp-1 11226 7.731 0.976 0.975 0.968 0.975 0.956 0.979 0.949 0.953 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
24. C05C8.4 gei-6 6026 7.731 0.941 0.979 0.957 0.979 0.961 0.983 0.967 0.964 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
25. T01G1.3 sec-31 10504 7.73 0.972 0.975 0.970 0.975 0.970 0.985 0.927 0.956 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
26. F36F2.3 rbpl-1 15376 7.73 0.960 0.982 0.968 0.982 0.953 0.967 0.955 0.963 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
27. Y67D8C.5 eel-1 30623 7.729 0.961 0.962 0.962 0.962 0.987 0.973 0.944 0.978 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
28. T05F1.6 hsr-9 13312 7.727 0.964 0.979 0.979 0.979 0.970 0.961 0.954 0.941
29. D1007.7 nrd-1 6738 7.727 0.958 0.981 0.970 0.981 0.980 0.973 0.972 0.912 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
30. T23B12.4 natc-1 7759 7.726 0.966 0.982 0.964 0.982 0.986 0.950 0.973 0.923 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
31. K10B2.1 lin-23 15896 7.726 0.925 0.966 0.966 0.966 0.986 0.983 0.975 0.959 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
32. ZK328.5 npp-10 7652 7.725 0.940 0.979 0.960 0.979 0.983 0.971 0.939 0.974 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
33. F12F6.3 rib-1 10524 7.724 0.934 0.980 0.968 0.980 0.983 0.962 0.953 0.964 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
34. F37A4.8 isw-1 9337 7.724 0.963 0.980 0.993 0.980 0.986 0.969 0.934 0.919 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
35. Y38A8.2 pbs-3 18117 7.724 0.928 0.975 0.977 0.975 0.986 0.971 0.955 0.957 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
36. F39B2.10 dnj-12 35162 7.724 0.929 0.978 0.964 0.978 0.986 0.986 0.973 0.930 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
37. CD4.6 pas-6 18332 7.724 0.927 0.976 0.973 0.976 0.976 0.984 0.947 0.965 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
38. F20D12.1 csr-1 16351 7.723 0.950 0.962 0.966 0.962 0.977 0.985 0.959 0.962 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
39. Y61A9LA.8 sut-2 11388 7.723 0.966 0.982 0.965 0.982 0.970 0.975 0.942 0.941 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
40. C13B4.2 usp-14 9000 7.722 0.950 0.973 0.964 0.973 0.986 0.968 0.959 0.949 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
41. M01E5.5 top-1 25458 7.721 0.963 0.972 0.962 0.972 0.993 0.974 0.952 0.933 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
42. ZK20.3 rad-23 35070 7.72 0.934 0.980 0.974 0.980 0.981 0.984 0.929 0.958
43. ZC404.9 gck-2 8382 7.72 0.945 0.978 0.988 0.978 0.991 0.984 0.942 0.914 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
44. K12D12.1 top-2 18694 7.719 0.970 0.979 0.957 0.979 0.965 0.972 0.947 0.950 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
45. C36B1.4 pas-4 13140 7.719 0.889 0.982 0.955 0.982 0.989 0.988 0.976 0.958 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
46. F17C11.10 F17C11.10 4355 7.719 0.930 0.977 0.976 0.977 0.976 0.974 0.959 0.950
47. F31D4.3 fkb-6 21313 7.717 0.936 0.976 0.972 0.976 0.986 0.977 0.947 0.947 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
48. C50C3.6 prp-8 19582 7.715 0.972 0.959 0.971 0.959 0.970 0.968 0.944 0.972 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
49. Y47G6A.20 rnp-6 5542 7.715 0.941 0.984 0.972 0.984 0.960 0.956 0.953 0.965 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
50. D1081.9 D1081.9 3792 7.714 0.957 0.971 0.984 0.971 0.977 0.977 0.973 0.904
51. C02F5.9 pbs-6 20120 7.714 0.910 0.984 0.970 0.984 0.974 0.976 0.960 0.956 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
52. Y54E10A.9 vbh-1 28746 7.714 0.935 0.981 0.952 0.981 0.981 0.965 0.959 0.960 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
53. F35G12.8 smc-4 6202 7.712 0.971 0.981 0.964 0.981 0.966 0.963 0.947 0.939 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
54. F01G4.1 swsn-4 14710 7.711 0.936 0.977 0.967 0.977 0.977 0.975 0.958 0.944 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
55. F58G11.1 letm-1 13414 7.711 0.939 0.965 0.960 0.965 0.983 0.984 0.970 0.945 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
56. C27D11.1 egl-45 28282 7.71 0.959 0.938 0.957 0.938 0.983 0.990 0.974 0.971 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
57. Y56A3A.1 ntl-3 10450 7.71 0.949 0.975 0.932 0.975 0.974 0.980 0.955 0.970 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
58. F28B3.7 him-1 18274 7.71 0.983 0.984 0.989 0.984 0.968 0.951 0.933 0.918 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
59. C47B2.4 pbs-2 19805 7.71 0.935 0.988 0.979 0.988 0.985 0.949 0.930 0.956 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
60. T01G9.4 npp-2 5361 7.709 0.959 0.982 0.977 0.982 0.979 0.920 0.944 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
61. VC5.4 mys-1 3996 7.709 0.945 0.982 0.952 0.982 0.984 0.949 0.951 0.964 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
62. F52C9.8 pqe-1 7546 7.706 0.964 0.966 0.955 0.966 0.982 0.981 0.941 0.951 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
63. C36B1.8 gls-1 8617 7.705 0.963 0.984 0.965 0.984 0.966 0.961 0.957 0.925 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
64. Y113G7B.23 swsn-1 13766 7.704 0.948 0.969 0.968 0.969 0.976 0.958 0.954 0.962 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
65. C32F10.5 hmg-3 5776 7.7 0.985 0.984 0.942 0.984 0.963 0.948 0.952 0.942 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
66. H06H21.6 ubxn-6 9202 7.699 0.959 0.964 0.970 0.964 0.982 0.976 0.932 0.952 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
67. K10D2.3 cid-1 7175 7.699 0.960 0.978 0.981 0.978 0.969 0.954 0.940 0.939 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
68. F01G4.3 skih-2 3353 7.696 0.958 0.981 0.967 0.981 0.957 0.958 0.928 0.966 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
69. K02F2.1 dpf-3 11465 7.695 0.955 0.968 0.973 0.968 0.979 0.986 0.955 0.911 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
70. C39E9.12 C39E9.12 3588 7.69 0.965 0.955 0.979 0.955 0.963 0.961 0.961 0.951
71. D1022.7 aka-1 10681 7.689 0.937 0.972 0.967 0.972 0.988 0.982 0.951 0.920 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
72. F43G9.10 mfap-1 9205 7.689 0.955 0.968 0.961 0.968 0.971 0.947 0.975 0.944 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
73. F23F1.8 rpt-4 14303 7.688 0.938 0.977 0.970 0.977 0.975 0.971 0.945 0.935 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
74. B0464.5 spk-1 35112 7.688 0.974 0.979 0.978 0.979 0.967 0.964 0.934 0.913 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
75. C25A1.5 C25A1.5 9135 7.687 0.934 0.951 0.965 0.951 0.982 0.988 0.973 0.943
76. Y116A8C.35 uaf-2 13808 7.686 0.934 0.981 0.967 0.981 0.966 0.953 0.953 0.951 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
77. T17E9.1 kin-18 8172 7.686 0.953 0.972 0.972 0.972 0.962 0.974 0.965 0.916 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
78. Y110A7A.14 pas-3 6831 7.684 0.921 0.983 0.951 0.983 0.983 0.961 0.952 0.950 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
79. T24B8.2 T24B8.2 2167 7.684 0.926 0.961 0.976 0.961 0.985 0.966 0.965 0.944
80. R01H2.6 ubc-18 13394 7.683 0.916 0.973 0.946 0.973 0.988 0.982 0.966 0.939 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
81. C29E4.2 kle-2 5527 7.682 0.937 0.972 0.957 0.972 0.975 0.968 0.961 0.940 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
82. T10F2.1 gars-1 7204 7.682 0.958 0.966 0.965 0.966 0.966 0.983 0.938 0.940 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
83. C17H12.1 dyci-1 9858 7.68 0.960 0.974 0.961 0.974 0.982 0.963 0.946 0.920 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
84. F56A3.3 npp-6 5425 7.679 0.960 0.977 0.965 0.977 0.944 0.981 0.948 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
85. Y32F6A.3 pap-1 11972 7.678 0.957 0.962 0.975 0.962 0.981 0.971 0.947 0.923 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
86. DY3.2 lmn-1 22449 7.677 0.946 0.984 0.969 0.984 0.970 0.972 0.919 0.933 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
87. B0334.5 B0334.5 4713 7.677 0.914 0.966 0.946 0.966 0.981 0.975 0.974 0.955
88. F28D9.1 rsr-1 4282 7.676 0.967 0.983 0.958 0.983 0.957 0.949 0.925 0.954 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
89. C38D4.3 mel-28 3515 7.675 0.966 0.969 0.939 0.969 0.976 0.954 0.949 0.953
90. Y81G3A.3 gcn-2 5831 7.675 0.965 0.976 0.948 0.976 0.966 0.971 0.941 0.932 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
91. R10H10.1 lpd-8 4272 7.673 0.937 0.954 0.975 0.954 0.961 0.976 0.957 0.959 LiPid Depleted [Source:RefSeq peptide;Acc:NP_501917]
92. C08C3.4 cyk-7 12075 7.673 0.965 0.958 0.970 0.958 0.985 0.951 0.936 0.950 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
93. Y71D11A.2 smr-1 4976 7.673 0.940 0.974 0.977 0.974 0.967 0.951 0.934 0.956 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
94. T20F5.7 T20F5.7 5210 7.672 0.951 0.952 0.978 0.952 0.982 0.985 0.928 0.944
95. Y105E8A.17 ekl-4 4732 7.67 0.947 0.984 0.962 0.984 0.973 0.945 0.920 0.955
96. F26E4.1 sur-6 16191 7.669 0.937 0.972 0.955 0.972 0.985 0.962 0.923 0.963 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
97. F59B2.7 rab-6.1 10749 7.669 0.924 0.946 0.981 0.946 0.990 0.964 0.955 0.963 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
98. Y17G7B.17 Y17G7B.17 11197 7.668 0.911 0.966 0.959 0.966 0.972 0.981 0.972 0.941
99. F22D6.5 prpf-4 9522 7.666 0.966 0.983 0.962 0.983 0.936 0.974 0.931 0.931 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
100. F12F6.5 srgp-1 9048 7.666 0.898 0.974 0.958 0.974 0.974 0.967 0.957 0.964 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]

There are 2982 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA