C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F48E8.6

Gene ID Gene Name Reads Transcripts Annotation
F48E8.6 disl-2 8774 F48E8.6 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]

Genes with expression patterns similar to F48E8.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F48E8.6 disl-2 8774 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
2. K01C8.10 cct-4 15077 7.747 0.953 0.970 0.964 0.970 0.977 0.967 0.970 0.976 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
3. C36B1.8 gls-1 8617 7.747 0.969 0.968 0.969 0.968 0.980 0.964 0.966 0.963 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
4. F41E6.4 smk-1 22394 7.743 0.967 0.968 0.971 0.968 0.975 0.981 0.953 0.960 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
5. T01G1.3 sec-31 10504 7.719 0.962 0.976 0.965 0.976 0.971 0.985 0.931 0.953 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
6. Y48G8AL.6 smg-2 12561 7.711 0.941 0.967 0.962 0.967 0.978 0.983 0.947 0.966 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
7. Y61A9LA.8 sut-2 11388 7.703 0.935 0.955 0.969 0.955 0.988 0.975 0.968 0.958 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
8. C27D11.1 egl-45 28282 7.698 0.955 0.950 0.957 0.950 0.974 0.992 0.970 0.950 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
9. F28B3.7 him-1 18274 7.698 0.964 0.977 0.970 0.977 0.984 0.950 0.951 0.925 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
10. F36F2.3 rbpl-1 15376 7.688 0.917 0.964 0.943 0.964 0.982 0.975 0.967 0.976 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
11. F18E2.3 scc-3 13464 7.688 0.968 0.960 0.965 0.960 0.984 0.968 0.942 0.941 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
12. F01G4.3 skih-2 3353 7.675 0.952 0.968 0.939 0.968 0.969 0.964 0.954 0.961 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
13. C50C3.6 prp-8 19582 7.673 0.942 0.960 0.962 0.960 0.983 0.961 0.939 0.966 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
14. W03F9.5 ttb-1 8682 7.671 0.952 0.957 0.962 0.957 0.973 0.984 0.943 0.943 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
15. K03H1.2 mog-1 4057 7.67 0.938 0.975 0.958 0.975 0.958 0.964 0.951 0.951 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
16. T20H4.3 pars-1 8167 7.669 0.947 0.960 0.943 0.960 0.969 0.978 0.941 0.971 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
17. T05C3.5 dnj-19 20420 7.665 0.971 0.982 0.967 0.982 0.963 0.944 0.940 0.916 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
18. C32E8.11 ubr-1 10338 7.665 0.965 0.963 0.942 0.963 0.975 0.972 0.943 0.942 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
19. Y67D8C.5 eel-1 30623 7.663 0.948 0.959 0.959 0.959 0.969 0.963 0.924 0.982 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
20. Y105E8A.17 ekl-4 4732 7.661 0.944 0.977 0.959 0.977 0.990 0.950 0.928 0.936
21. F52C9.8 pqe-1 7546 7.657 0.943 0.958 0.951 0.958 0.972 0.981 0.944 0.950 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
22. B0025.2 csn-2 5205 7.652 0.952 0.949 0.962 0.949 0.967 0.960 0.952 0.961 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
23. D2089.1 rsp-7 11057 7.651 0.934 0.952 0.964 0.952 0.970 0.978 0.958 0.943 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
24. K04G2.1 iftb-1 12590 7.649 0.898 0.959 0.947 0.959 0.984 0.982 0.947 0.973 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
25. C53D5.6 imb-3 28921 7.646 0.941 0.954 0.961 0.954 0.986 0.951 0.954 0.945 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
26. F56D1.7 daz-1 23684 7.646 0.968 0.970 0.977 0.970 0.981 0.938 0.920 0.922 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
27. T05F1.6 hsr-9 13312 7.644 0.927 0.969 0.977 0.969 0.977 0.947 0.946 0.932
28. F39B2.10 dnj-12 35162 7.643 0.925 0.960 0.966 0.960 0.956 0.980 0.955 0.941 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
29. F26F4.10 rars-1 9971 7.642 0.946 0.953 0.955 0.953 0.973 0.958 0.950 0.954 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
30. Y55D9A.1 efa-6 10012 7.642 0.904 0.961 0.962 0.961 0.972 0.986 0.949 0.947 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
31. F28D9.1 rsr-1 4282 7.641 0.928 0.967 0.952 0.967 0.971 0.968 0.935 0.953 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
32. T10F2.1 gars-1 7204 7.64 0.940 0.967 0.950 0.967 0.969 0.986 0.930 0.931 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
33. Y81G3A.3 gcn-2 5831 7.638 0.949 0.948 0.964 0.948 0.979 0.971 0.941 0.938 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
34. Y56A3A.1 ntl-3 10450 7.638 0.938 0.958 0.930 0.958 0.970 0.974 0.936 0.974 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
35. C07G1.4 wsp-1 11226 7.637 0.976 0.966 0.961 0.966 0.943 0.967 0.918 0.940 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
36. Y38A8.2 pbs-3 18117 7.636 0.917 0.951 0.971 0.951 0.969 0.970 0.951 0.956 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
37. T04A8.14 emb-5 11746 7.636 0.948 0.949 0.971 0.949 0.966 0.953 0.951 0.949 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
38. F56A3.3 npp-6 5425 7.636 0.943 0.970 0.962 0.970 0.962 0.984 0.944 0.901 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
39. Y47G6A.20 rnp-6 5542 7.635 0.903 0.954 0.974 0.954 0.977 0.971 0.935 0.967 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
40. Y113G7B.23 swsn-1 13766 7.633 0.938 0.949 0.976 0.949 0.961 0.946 0.940 0.974 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
41. F36A4.7 ama-1 13620 7.632 0.928 0.954 0.965 0.954 0.971 0.961 0.958 0.941 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
42. Y40B1B.5 eif-3.J 15061 7.632 0.921 0.949 0.960 0.949 0.986 0.952 0.938 0.977 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
43. K11D12.2 pqn-51 15951 7.631 0.936 0.970 0.961 0.970 0.969 0.949 0.905 0.971 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
44. F20D12.1 csr-1 16351 7.63 0.946 0.954 0.961 0.954 0.967 0.979 0.932 0.937 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
45. Y48G8AL.1 herc-1 3873 7.63 0.933 0.968 0.954 0.968 0.954 0.974 0.932 0.947 HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
46. F10G8.3 rae-1 7542 7.63 0.933 0.953 0.969 0.953 0.979 0.944 0.977 0.922 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
47. M106.1 mix-1 7950 7.629 0.932 0.961 0.966 0.961 0.975 0.953 0.949 0.932 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
48. Y57A10A.18 pqn-87 31844 7.629 0.970 0.967 0.968 0.967 0.975 0.942 0.934 0.906 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
49. F32A5.1 ada-2 8343 7.629 0.962 0.936 0.960 0.936 0.977 0.970 0.954 0.934 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
50. Y54E10A.9 vbh-1 28746 7.628 0.932 0.950 0.951 0.950 0.976 0.955 0.961 0.953 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
51. T27E9.7 abcf-2 40273 7.627 0.925 0.946 0.972 0.946 0.982 0.952 0.966 0.938 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
52. F22D6.3 nars-1 18624 7.627 0.931 0.976 0.961 0.976 0.974 0.907 0.940 0.962 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
53. C08B11.6 arp-6 4646 7.625 0.938 0.953 0.944 0.953 0.986 0.952 0.960 0.939 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
54. F39H11.5 pbs-7 13631 7.625 0.907 0.973 0.958 0.973 0.970 0.979 0.923 0.942 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
55. H19N07.1 erfa-3 19869 7.625 0.909 0.968 0.946 0.968 0.972 0.936 0.969 0.957 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
56. F44A2.1 tag-153 16535 7.624 0.969 0.975 0.961 0.975 0.973 0.961 0.904 0.906
57. T01G9.4 npp-2 5361 7.624 0.938 0.961 0.958 0.961 0.974 0.952 0.923 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
58. F37E3.1 ncbp-1 5649 7.624 0.946 0.971 0.953 0.971 0.944 0.941 0.957 0.941 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
59. C34E10.5 prmt-5 12277 7.623 0.935 0.973 0.968 0.973 0.955 0.925 0.936 0.958 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
60. T23D8.4 eif-3.C 15343 7.621 0.900 0.956 0.969 0.956 0.971 0.957 0.963 0.949 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
61. C47B2.4 pbs-2 19805 7.621 0.948 0.966 0.957 0.966 0.970 0.942 0.933 0.939 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
62. F30F8.8 taf-5 2008 7.62 0.926 0.967 0.955 0.967 0.967 0.963 0.918 0.957 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_492169]
63. D1081.9 D1081.9 3792 7.62 0.946 0.956 0.965 0.956 0.989 0.984 0.936 0.888
64. K10D2.3 cid-1 7175 7.617 0.967 0.968 0.968 0.968 0.972 0.977 0.908 0.889 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
65. F42A10.1 abcf-3 5557 7.617 0.937 0.950 0.947 0.950 0.974 0.947 0.949 0.963 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
66. ZC395.8 ztf-8 5521 7.616 0.926 0.947 0.970 0.947 0.991 0.961 0.941 0.933 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
67. Y116A8C.35 uaf-2 13808 7.616 0.911 0.959 0.941 0.959 0.971 0.957 0.972 0.946 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
68. B0511.10 eif-3.E 10041 7.615 0.902 0.961 0.938 0.961 0.961 0.977 0.946 0.969 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
69. F58G11.1 letm-1 13414 7.614 0.926 0.942 0.962 0.942 0.963 0.981 0.941 0.957 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
70. T05H4.6 erfa-1 12542 7.614 0.898 0.979 0.949 0.979 0.965 0.931 0.946 0.967 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
71. C39E9.14 dli-1 5650 7.614 0.960 0.960 0.968 0.960 0.962 0.933 0.912 0.959 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
72. F45H11.3 hpo-35 8299 7.613 0.953 0.961 0.955 0.961 0.976 0.974 0.926 0.907
73. C05C8.4 gei-6 6026 7.613 0.907 0.958 0.941 0.958 0.967 0.979 0.943 0.960 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
74. K02F2.1 dpf-3 11465 7.613 0.938 0.943 0.965 0.943 0.976 0.981 0.939 0.928 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
75. T12E12.4 drp-1 7694 7.612 0.926 0.959 0.958 0.959 0.981 0.970 0.899 0.960 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
76. T01G9.6 kin-10 27360 7.611 0.906 0.965 0.929 0.965 0.981 0.979 0.924 0.962 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
77. T17E9.1 kin-18 8172 7.609 0.934 0.970 0.952 0.970 0.963 0.965 0.943 0.912 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
78. T21E12.4 dhc-1 20370 7.609 0.962 0.962 0.977 0.962 0.970 0.971 0.877 0.928 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
79. K08D12.1 pbs-1 21677 7.608 0.937 0.950 0.957 0.950 0.963 0.965 0.926 0.960 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
80. F46A9.4 skr-2 16831 7.606 0.934 0.962 0.969 0.962 0.982 0.950 0.936 0.911 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
81. Y71F9B.16 dnj-30 4262 7.606 0.894 0.962 0.959 0.962 0.962 0.956 0.968 0.943 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
82. CD4.6 pas-6 18332 7.606 0.935 0.950 0.943 0.950 0.965 0.976 0.943 0.944 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
83. F22D6.5 prpf-4 9522 7.605 0.925 0.951 0.977 0.951 0.964 0.971 0.936 0.930 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
84. Y102A5A.1 cand-1 11808 7.605 0.918 0.949 0.955 0.949 0.979 0.944 0.962 0.949 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
85. R119.4 pqn-59 16065 7.604 0.966 0.934 0.970 0.934 0.969 0.933 0.942 0.956 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
86. T10F2.4 prp-19 11298 7.604 0.923 0.958 0.962 0.958 0.977 0.933 0.942 0.951 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
87. K08E3.8 mdt-29 4678 7.604 0.938 0.944 0.964 0.944 0.977 0.953 0.944 0.940 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
88. T08A11.2 T08A11.2 12269 7.604 0.920 0.981 0.950 0.981 0.968 0.957 0.922 0.925
89. D1007.7 nrd-1 6738 7.603 0.965 0.961 0.951 0.961 0.956 0.978 0.913 0.918 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
90. C43E11.1 acin-1 7781 7.601 0.926 0.959 0.970 0.959 0.973 0.942 0.952 0.920 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
91. ZK328.5 npp-10 7652 7.6 0.916 0.965 0.958 0.965 0.971 0.976 0.916 0.933 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
92. T08B2.9 fars-1 12650 7.6 0.931 0.966 0.949 0.966 0.935 0.938 0.945 0.970 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
93. Y43H11AL.3 pqn-85 2924 7.6 0.940 0.974 0.933 0.974 0.975 0.960 0.919 0.925 Nipped-B-like protein pqn-85 [Source:UniProtKB/Swiss-Prot;Acc:Q95XZ5]
94. Y37A1B.1 lst-3 10739 7.6 0.960 0.966 0.971 0.966 0.948 0.904 0.928 0.957 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
95. F59B2.7 rab-6.1 10749 7.599 0.927 0.947 0.964 0.947 0.974 0.965 0.924 0.951 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
96. F32E10.4 ima-3 35579 7.599 0.934 0.972 0.966 0.972 0.956 0.921 0.934 0.944 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
97. Y92C3B.2 uaf-1 14981 7.598 0.935 0.979 0.963 0.979 0.971 0.967 0.885 0.919 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
98. Y110A7A.14 pas-3 6831 7.598 0.928 0.965 0.939 0.965 0.971 0.973 0.931 0.926 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
99. H06H21.3 eif-1.A 40990 7.598 0.898 0.959 0.934 0.959 0.977 0.984 0.956 0.931 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
100. Y73B6BL.6 sqd-1 41708 7.595 0.933 0.967 0.945 0.967 0.968 0.916 0.948 0.951 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]

There are 2260 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA