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Results for F52C12.4

Gene ID Gene Name Reads Transcripts Annotation
F52C12.4 denn-4 4398 F52C12.4a, F52C12.4b, F52C12.4c, F52C12.4d, F52C12.4e, F52C12.4f, F52C12.4g, F52C12.4h DENN domain type RAB GEF [Source:RefSeq peptide;Acc:NP_001294384]

Genes with expression patterns similar to F52C12.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F52C12.4 denn-4 4398 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DENN domain type RAB GEF [Source:RefSeq peptide;Acc:NP_001294384]
2. F39B2.10 dnj-12 35162 7.652 0.948 0.961 0.969 0.961 0.974 0.986 0.954 0.899 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
3. C50C3.6 prp-8 19582 7.616 0.943 0.946 0.976 0.946 0.974 0.983 0.930 0.918 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
4. F25G6.9 F25G6.9 3071 7.593 0.932 0.947 0.943 0.947 0.989 0.971 0.946 0.918
5. F41E6.4 smk-1 22394 7.584 0.936 0.963 0.925 0.963 0.989 0.981 0.927 0.900 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
6. Y38A8.2 pbs-3 18117 7.581 0.940 0.968 0.903 0.968 0.972 0.992 0.935 0.903 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
7. Y56A3A.20 ccf-1 18463 7.581 0.949 0.968 0.932 0.968 0.956 0.956 0.914 0.938 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
8. Y54E10A.9 vbh-1 28746 7.576 0.954 0.947 0.959 0.947 0.985 0.961 0.921 0.902 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
9. F48E8.6 disl-2 8774 7.559 0.957 0.941 0.924 0.941 0.979 0.975 0.900 0.942 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
10. D2089.1 rsp-7 11057 7.557 0.920 0.962 0.934 0.962 0.968 0.975 0.926 0.910 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
11. Y57A10A.18 pqn-87 31844 7.557 0.932 0.972 0.937 0.972 0.967 0.976 0.919 0.882 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
12. C09G12.9 tsg-101 9451 7.556 0.946 0.957 0.887 0.957 0.957 0.968 0.940 0.944 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
13. F39H11.5 pbs-7 13631 7.552 0.942 0.964 0.924 0.964 0.984 0.977 0.927 0.870 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
14. K08D12.1 pbs-1 21677 7.549 0.945 0.955 0.905 0.955 0.974 0.979 0.936 0.900 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
15. T01G1.3 sec-31 10504 7.547 0.950 0.964 0.913 0.964 0.972 0.988 0.903 0.893 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
16. K07C5.8 cash-1 10523 7.546 0.943 0.958 0.957 0.958 0.981 0.960 0.916 0.873 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
17. K04G2.1 iftb-1 12590 7.543 0.926 0.947 0.960 0.947 0.971 0.968 0.922 0.902 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
18. CD4.6 pas-6 18332 7.541 0.931 0.964 0.929 0.964 0.978 0.973 0.919 0.883 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
19. ZK20.3 rad-23 35070 7.54 0.944 0.945 0.956 0.945 0.964 0.978 0.927 0.881
20. C47B2.4 pbs-2 19805 7.536 0.965 0.959 0.898 0.959 0.981 0.977 0.934 0.863 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
21. F08F8.3 kap-1 31437 7.535 0.968 0.960 0.955 0.960 0.962 0.941 0.853 0.936 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
22. Y102A5A.1 cand-1 11808 7.532 0.950 0.960 0.932 0.960 0.972 0.973 0.881 0.904 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
23. Y67D8C.5 eel-1 30623 7.53 0.935 0.925 0.961 0.925 0.983 0.976 0.901 0.924 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
24. Y55B1AR.2 Y55B1AR.2 4511 7.529 0.905 0.953 0.944 0.953 0.973 0.978 0.895 0.928
25. Y48G8AL.6 smg-2 12561 7.529 0.947 0.939 0.930 0.939 0.976 0.977 0.934 0.887 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
26. Y113G7B.23 swsn-1 13766 7.528 0.916 0.949 0.917 0.949 0.969 0.981 0.920 0.927 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
27. C39E9.14 dli-1 5650 7.528 0.954 0.951 0.925 0.951 0.945 0.955 0.898 0.949 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
28. T12D8.6 mlc-5 19567 7.527 0.918 0.953 0.919 0.953 0.974 0.975 0.920 0.915 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
29. F38H4.9 let-92 25368 7.526 0.954 0.945 0.935 0.945 0.981 0.948 0.906 0.912 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
30. Y73B6BL.6 sqd-1 41708 7.525 0.956 0.954 0.916 0.954 0.976 0.960 0.910 0.899 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
31. F25D1.1 ppm-1 16992 7.525 0.931 0.953 0.939 0.953 0.972 0.971 0.924 0.882 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
32. C07G1.4 wsp-1 11226 7.518 0.951 0.968 0.911 0.968 0.957 0.969 0.876 0.918 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
33. T21E12.4 dhc-1 20370 7.516 0.944 0.947 0.952 0.947 0.983 0.973 0.902 0.868 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
34. F55C5.8 srpa-68 6665 7.514 0.971 0.948 0.851 0.948 0.968 0.950 0.931 0.947 Probable signal recognition particle subunit SRP68 [Source:UniProtKB/Swiss-Prot;Acc:Q20822]
35. B0261.2 let-363 8628 7.514 0.924 0.953 0.946 0.953 0.962 0.970 0.941 0.865 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
36. F40G9.3 ubc-20 16785 7.512 0.909 0.959 0.926 0.959 0.974 0.985 0.898 0.902 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
37. ZK616.6 perm-3 16186 7.511 0.928 0.945 0.947 0.945 0.944 0.962 0.891 0.949 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
38. K01C8.10 cct-4 15077 7.506 0.930 0.951 0.921 0.951 0.963 0.944 0.921 0.925 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
39. T05H4.6 erfa-1 12542 7.505 0.955 0.925 0.956 0.925 0.963 0.965 0.876 0.940 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
40. Y40B1B.5 eif-3.J 15061 7.504 0.933 0.939 0.949 0.939 0.975 0.961 0.900 0.908 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
41. B0205.7 kin-3 29775 7.503 0.935 0.912 0.938 0.912 0.982 0.993 0.929 0.902 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
42. K10C3.2 ensa-1 19836 7.502 0.914 0.962 0.893 0.962 0.964 0.966 0.894 0.947 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
43. T01G9.6 kin-10 27360 7.501 0.922 0.924 0.936 0.924 0.990 0.984 0.930 0.891 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
44. T20H4.3 pars-1 8167 7.498 0.964 0.921 0.956 0.921 0.962 0.974 0.893 0.907 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
45. F39B2.11 mtx-1 8526 7.498 0.952 0.932 0.936 0.932 0.977 0.979 0.897 0.893 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
46. ZK652.3 ufm-1 12647 7.497 0.929 0.939 0.950 0.939 0.943 0.947 0.947 0.903 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
47. F10G8.3 rae-1 7542 7.496 0.963 0.954 0.946 0.954 0.964 0.929 0.912 0.874 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
48. ZC395.3 toc-1 6437 7.495 0.898 0.968 0.933 0.968 0.938 0.959 0.927 0.904 similar to Transporter Of divalent Cations [Source:RefSeq peptide;Acc:NP_001033385]
49. F20D12.1 csr-1 16351 7.494 0.965 0.937 0.958 0.937 0.976 0.955 0.887 0.879 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
50. K11D12.2 pqn-51 15951 7.491 0.947 0.964 0.925 0.964 0.949 0.967 0.830 0.945 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
51. K04G7.10 rnp-7 11219 7.491 0.933 0.956 0.921 0.956 0.951 0.965 0.896 0.913 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
52. H06H21.3 eif-1.A 40990 7.489 0.935 0.932 0.949 0.932 0.982 0.982 0.929 0.848 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
53. F41E6.9 vps-60 4469 7.489 0.933 0.927 0.937 0.927 0.964 0.974 0.918 0.909 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
54. F57B9.5 byn-1 58236 7.489 0.954 0.925 0.953 0.925 0.964 0.976 0.912 0.880 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
55. F58G11.1 letm-1 13414 7.488 0.927 0.942 0.909 0.942 0.970 0.988 0.930 0.880 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
56. C36B1.8 gls-1 8617 7.487 0.946 0.964 0.890 0.964 0.972 0.965 0.875 0.911 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
57. F35G12.2 idhg-1 30065 7.487 0.930 0.927 0.925 0.927 0.974 0.988 0.945 0.871 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
58. K08E3.8 mdt-29 4678 7.487 0.948 0.960 0.931 0.960 0.969 0.967 0.870 0.882 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
59. Y39G10AR.9 Y39G10AR.9 3972 7.486 0.923 0.964 0.952 0.964 0.952 0.945 0.879 0.907
60. Y61A9LA.8 sut-2 11388 7.486 0.917 0.969 0.913 0.969 0.970 0.951 0.880 0.917 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
61. Y92C3B.2 uaf-1 14981 7.486 0.938 0.945 0.948 0.945 0.980 0.972 0.924 0.834 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
62. Y77E11A.13 npp-20 5777 7.485 0.936 0.926 0.920 0.926 0.966 0.966 0.925 0.920 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
63. F54D5.8 dnj-13 18315 7.485 0.979 0.958 0.959 0.958 0.951 0.947 0.913 0.820 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_496468]
64. Y55D9A.1 efa-6 10012 7.485 0.875 0.959 0.915 0.959 0.973 0.976 0.938 0.890 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
65. R02D3.5 fnta-1 5258 7.484 0.952 0.955 0.906 0.955 0.971 0.961 0.892 0.892 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
66. K01G5.9 K01G5.9 2321 7.483 0.957 0.943 0.927 0.943 0.972 0.988 0.899 0.854
67. H19N07.1 erfa-3 19869 7.482 0.925 0.949 0.929 0.949 0.960 0.957 0.881 0.932 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
68. B0035.6 B0035.6 7327 7.482 0.935 0.955 0.881 0.955 0.958 0.981 0.908 0.909
69. Y56A3A.1 ntl-3 10450 7.482 0.923 0.962 0.861 0.962 0.967 0.962 0.931 0.914 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
70. T20F5.7 T20F5.7 5210 7.479 0.897 0.950 0.928 0.950 0.981 0.970 0.913 0.890
71. K10B2.1 lin-23 15896 7.478 0.896 0.958 0.872 0.958 0.986 0.968 0.945 0.895 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
72. R10H10.1 lpd-8 4272 7.476 0.937 0.942 0.928 0.942 0.942 0.978 0.914 0.893 LiPid Depleted [Source:RefSeq peptide;Acc:NP_501917]
73. F18E2.3 scc-3 13464 7.476 0.946 0.966 0.894 0.966 0.982 0.935 0.899 0.888 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
74. F22D6.3 nars-1 18624 7.476 0.937 0.957 0.944 0.957 0.951 0.925 0.874 0.931 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
75. Y48G8AL.1 herc-1 3873 7.474 0.926 0.953 0.942 0.953 0.940 0.968 0.903 0.889 HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
76. F33D11.11 vpr-1 18001 7.473 0.865 0.952 0.863 0.952 0.976 0.990 0.925 0.950 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
77. C05C8.4 gei-6 6026 7.472 0.913 0.968 0.868 0.968 0.949 0.974 0.916 0.916 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
78. Y116A8C.35 uaf-2 13808 7.472 0.906 0.959 0.908 0.959 0.965 0.963 0.932 0.880 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
79. F59B2.7 rab-6.1 10749 7.472 0.956 0.930 0.921 0.930 0.978 0.943 0.923 0.891 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
80. D1014.3 snap-1 16776 7.471 0.901 0.964 0.913 0.964 0.986 0.949 0.923 0.871 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
81. ZC518.2 sec-24.2 13037 7.471 0.944 0.947 0.943 0.947 0.961 0.947 0.936 0.846 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
82. T08B2.9 fars-1 12650 7.47 0.962 0.947 0.952 0.947 0.899 0.950 0.855 0.958 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
83. Y53C12A.4 mop-25.2 7481 7.47 0.896 0.964 0.905 0.964 0.946 0.971 0.928 0.896 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
84. C18D11.4 rsp-8 18308 7.469 0.908 0.933 0.901 0.933 0.974 0.977 0.902 0.941 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
85. Y111B2A.11 epc-1 8915 7.469 0.948 0.948 0.893 0.948 0.972 0.971 0.879 0.910 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
86. C33H5.17 zgpa-1 7873 7.469 0.939 0.958 0.880 0.958 0.978 0.972 0.890 0.894 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
87. T27F7.3 eif-1 28176 7.468 0.906 0.910 0.944 0.910 0.978 0.969 0.915 0.936 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
88. T17E9.2 nmt-1 8017 7.468 0.929 0.946 0.955 0.946 0.951 0.939 0.873 0.929 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
89. H06H21.6 ubxn-6 9202 7.468 0.936 0.941 0.943 0.941 0.976 0.981 0.882 0.868 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
90. C02F5.9 pbs-6 20120 7.466 0.923 0.966 0.928 0.966 0.963 0.965 0.912 0.843 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
91. F28B3.7 him-1 18274 7.465 0.928 0.959 0.940 0.959 0.974 0.948 0.849 0.908 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
92. Y47G6A.20 rnp-6 5542 7.464 0.906 0.961 0.925 0.961 0.956 0.968 0.890 0.897 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
93. C08B11.6 arp-6 4646 7.463 0.946 0.917 0.938 0.917 0.981 0.952 0.899 0.913 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
94. R05D11.3 ran-4 15494 7.463 0.919 0.943 0.937 0.943 0.946 0.949 0.868 0.958 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
95. C09G4.1 hyl-1 8815 7.461 0.896 0.940 0.941 0.940 0.970 0.961 0.927 0.886 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
96. T27E9.7 abcf-2 40273 7.46 0.953 0.905 0.958 0.905 0.991 0.964 0.928 0.856 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
97. T04A8.14 emb-5 11746 7.46 0.917 0.950 0.889 0.950 0.954 0.970 0.893 0.937 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
98. Y71F9B.16 dnj-30 4262 7.459 0.937 0.968 0.942 0.968 0.944 0.931 0.870 0.899 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
99. C34E10.1 gop-3 11393 7.459 0.911 0.940 0.925 0.940 0.967 0.966 0.886 0.924 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
100. F26F4.10 rars-1 9971 7.458 0.943 0.937 0.941 0.937 0.958 0.962 0.874 0.906 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA