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Results for Y56A3A.1

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.1 ntl-3 10450 Y56A3A.1a.1, Y56A3A.1a.2, Y56A3A.1b.1, Y56A3A.1b.2 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]

Genes with expression patterns similar to Y56A3A.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.1 ntl-3 10450 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
2. W03F9.5 ttb-1 8682 7.731 0.969 0.976 0.969 0.976 0.956 0.974 0.936 0.975 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
3. T06D8.6 cchl-1 26292 7.714 0.952 0.982 0.964 0.982 0.978 0.974 0.963 0.919 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
4. F41E6.4 smk-1 22394 7.71 0.949 0.975 0.932 0.975 0.974 0.980 0.955 0.970 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
5. F33D11.11 vpr-1 18001 7.702 0.955 0.982 0.974 0.982 0.971 0.960 0.941 0.937 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
6. K02F2.1 dpf-3 11465 7.689 0.973 0.964 0.961 0.964 0.971 0.978 0.945 0.933 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
7. F26E4.1 sur-6 16191 7.687 0.950 0.974 0.977 0.974 0.959 0.972 0.932 0.949 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
8. Y67D8C.5 eel-1 30623 7.685 0.948 0.961 0.935 0.961 0.978 0.968 0.955 0.979 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
9. K01C8.10 cct-4 15077 7.679 0.939 0.973 0.959 0.973 0.958 0.962 0.966 0.949 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
10. F58G11.1 letm-1 13414 7.676 0.955 0.975 0.953 0.975 0.964 0.968 0.942 0.944 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
11. K08D12.1 pbs-1 21677 7.67 0.957 0.975 0.922 0.975 0.977 0.966 0.946 0.952 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
12. F39B2.10 dnj-12 35162 7.669 0.934 0.985 0.931 0.985 0.966 0.973 0.980 0.915 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
13. CD4.6 pas-6 18332 7.664 0.961 0.987 0.922 0.987 0.965 0.966 0.928 0.948 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
14. F39H11.5 pbs-7 13631 7.663 0.934 0.978 0.957 0.978 0.957 0.969 0.943 0.947 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
15. Y116A8C.35 uaf-2 13808 7.662 0.937 0.983 0.948 0.983 0.964 0.959 0.950 0.938 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
16. Y92C3B.2 uaf-1 14981 7.662 0.967 0.978 0.950 0.978 0.961 0.941 0.946 0.941 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
17. Y55D9A.1 efa-6 10012 7.662 0.964 0.955 0.940 0.955 0.974 0.966 0.957 0.951 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
18. T01G1.3 sec-31 10504 7.66 0.953 0.970 0.976 0.970 0.973 0.978 0.907 0.933 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
19. Y54E10A.9 vbh-1 28746 7.655 0.928 0.976 0.934 0.976 0.967 0.968 0.957 0.949 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
20. Y57G7A.10 emc-2 4837 7.654 0.952 0.950 0.963 0.950 0.958 0.955 0.958 0.968 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_001254028]
21. K10D2.3 cid-1 7175 7.653 0.950 0.979 0.961 0.979 0.974 0.956 0.959 0.895 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
22. F59B2.7 rab-6.1 10749 7.652 0.940 0.970 0.962 0.970 0.978 0.932 0.952 0.948 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
23. T20F5.7 T20F5.7 5210 7.652 0.973 0.953 0.953 0.953 0.975 0.966 0.960 0.919
24. C18D11.4 rsp-8 18308 7.651 0.962 0.963 0.971 0.963 0.964 0.957 0.937 0.934 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
25. C47D12.6 tars-1 23488 7.65 0.958 0.968 0.954 0.968 0.976 0.940 0.929 0.957 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
26. F18E2.3 scc-3 13464 7.649 0.967 0.970 0.948 0.970 0.976 0.948 0.940 0.930 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
27. Y38A8.2 pbs-3 18117 7.648 0.934 0.976 0.965 0.976 0.955 0.956 0.939 0.947 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
28. Y71D11A.2 smr-1 4976 7.647 0.978 0.973 0.946 0.973 0.957 0.939 0.941 0.940 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
29. T05F1.6 hsr-9 13312 7.647 0.957 0.973 0.950 0.973 0.968 0.946 0.939 0.941
30. Y113G7B.23 swsn-1 13766 7.645 0.961 0.961 0.957 0.961 0.967 0.940 0.947 0.951 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
31. EEED8.7 rsp-4 13043 7.641 0.954 0.968 0.965 0.968 0.955 0.971 0.916 0.944 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
32. C09G4.1 hyl-1 8815 7.641 0.924 0.973 0.933 0.973 0.976 0.987 0.923 0.952 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
33. C25A1.5 C25A1.5 9135 7.641 0.956 0.963 0.970 0.963 0.970 0.967 0.945 0.907
34. C36B1.4 pas-4 13140 7.641 0.902 0.979 0.978 0.979 0.969 0.963 0.930 0.941 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
35. C50C3.6 prp-8 19582 7.639 0.948 0.969 0.911 0.969 0.974 0.956 0.947 0.965 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
36. F48E8.6 disl-2 8774 7.638 0.938 0.958 0.930 0.958 0.970 0.974 0.936 0.974 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
37. K06H7.9 idi-1 3291 7.638 0.962 0.968 0.934 0.968 0.969 0.962 0.931 0.944 Isopentenyl Diphosphate Isomerase [Source:RefSeq peptide;Acc:NP_498766]
38. T04A8.14 emb-5 11746 7.638 0.962 0.979 0.971 0.979 0.951 0.943 0.923 0.930 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
39. T12D8.6 mlc-5 19567 7.636 0.926 0.978 0.960 0.978 0.956 0.944 0.949 0.945 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
40. Y102A5A.1 cand-1 11808 7.636 0.923 0.977 0.964 0.977 0.971 0.947 0.936 0.941 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
41. ZK328.5 npp-10 7652 7.635 0.948 0.970 0.938 0.970 0.962 0.951 0.927 0.969 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
42. K10B2.1 lin-23 15896 7.635 0.969 0.957 0.953 0.957 0.952 0.962 0.938 0.947 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
43. C36B1.8 gls-1 8617 7.634 0.983 0.969 0.960 0.969 0.958 0.940 0.916 0.939 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
44. C10C6.6 catp-8 8079 7.633 0.944 0.962 0.968 0.962 0.979 0.957 0.927 0.934 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
45. F12F6.3 rib-1 10524 7.632 0.954 0.972 0.948 0.972 0.969 0.951 0.915 0.951 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
46. K04G2.1 iftb-1 12590 7.63 0.907 0.976 0.921 0.976 0.962 0.967 0.954 0.967 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
47. Y17G7B.17 Y17G7B.17 11197 7.629 0.964 0.965 0.960 0.965 0.943 0.979 0.909 0.944
48. D2089.1 rsp-7 11057 7.628 0.952 0.979 0.942 0.979 0.969 0.968 0.921 0.918 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
49. D1007.7 nrd-1 6738 7.626 0.946 0.972 0.938 0.972 0.966 0.964 0.957 0.911 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
50. ZK20.3 rad-23 35070 7.626 0.952 0.961 0.942 0.961 0.960 0.962 0.946 0.942
51. F58B6.3 par-2 3914 7.626 0.967 0.963 0.950 0.963 0.972 0.955 0.922 0.934
52. K10C3.2 ensa-1 19836 7.626 0.952 0.964 0.957 0.964 0.959 0.951 0.934 0.945 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
53. B0334.5 B0334.5 4713 7.624 0.940 0.970 0.919 0.970 0.957 0.978 0.950 0.940
54. Y48G8AL.6 smg-2 12561 7.624 0.936 0.955 0.916 0.955 0.965 0.978 0.953 0.966 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
55. F16D3.2 rsd-6 8211 7.623 0.963 0.966 0.931 0.966 0.967 0.963 0.925 0.942
56. T21E12.4 dhc-1 20370 7.622 0.964 0.973 0.936 0.973 0.977 0.958 0.918 0.923 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
57. C13B4.2 usp-14 9000 7.621 0.970 0.967 0.957 0.967 0.968 0.946 0.932 0.914 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
58. C47B2.4 pbs-2 19805 7.62 0.953 0.969 0.966 0.969 0.957 0.932 0.943 0.931 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
59. F28D9.1 rsr-1 4282 7.62 0.934 0.966 0.950 0.966 0.985 0.943 0.922 0.954 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
60. Y57E12AM.1 Y57E12AM.1 10510 7.618 0.971 0.951 0.936 0.951 0.957 0.956 0.954 0.942 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
61. F17C11.10 F17C11.10 4355 7.617 0.950 0.961 0.944 0.961 0.964 0.965 0.965 0.907
62. K12D12.1 top-2 18694 7.617 0.971 0.954 0.973 0.954 0.948 0.957 0.942 0.918 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
63. F55C5.8 srpa-68 6665 7.616 0.961 0.968 0.965 0.968 0.954 0.928 0.948 0.924 Probable signal recognition particle subunit SRP68 [Source:UniProtKB/Swiss-Prot;Acc:Q20822]
64. C07G1.4 wsp-1 11226 7.616 0.938 0.965 0.952 0.965 0.951 0.972 0.921 0.952 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
65. C17H12.1 dyci-1 9858 7.616 0.964 0.965 0.947 0.965 0.977 0.952 0.935 0.911 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
66. F35G12.2 idhg-1 30065 7.615 0.941 0.974 0.933 0.974 0.965 0.961 0.970 0.897 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
67. Y53C12A.4 mop-25.2 7481 7.614 0.940 0.967 0.970 0.967 0.945 0.960 0.937 0.928 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
68. R06F6.5 npp-19 5067 7.614 0.950 0.959 0.958 0.959 0.970 0.959 0.961 0.898 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
69. T12D8.2 drr-2 16208 7.611 0.958 0.957 0.958 0.957 0.957 0.953 0.938 0.933 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
70. F37E3.1 ncbp-1 5649 7.611 0.959 0.972 0.968 0.972 0.942 0.943 0.927 0.928 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
71. H06H21.6 ubxn-6 9202 7.609 0.961 0.967 0.937 0.967 0.963 0.950 0.920 0.944 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
72. C32E8.11 ubr-1 10338 7.608 0.940 0.946 0.917 0.946 0.977 0.977 0.936 0.969 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
73. T10F2.1 gars-1 7204 7.608 0.932 0.971 0.938 0.971 0.959 0.969 0.962 0.906 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
74. ZC395.8 ztf-8 5521 7.607 0.941 0.968 0.963 0.968 0.968 0.934 0.891 0.974 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
75. F36D4.3 hum-2 16493 7.607 0.956 0.948 0.965 0.948 0.949 0.958 0.928 0.955 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
76. Y81G3A.3 gcn-2 5831 7.607 0.971 0.962 0.935 0.962 0.960 0.963 0.913 0.941 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
77. C08C3.4 cyk-7 12075 7.607 0.959 0.973 0.939 0.973 0.973 0.931 0.933 0.926 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
78. C05C8.4 gei-6 6026 7.607 0.927 0.967 0.922 0.967 0.935 0.967 0.950 0.972 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
79. F44A2.1 tag-153 16535 7.605 0.959 0.970 0.969 0.970 0.957 0.949 0.920 0.911
80. T23B12.4 natc-1 7759 7.605 0.957 0.957 0.979 0.957 0.957 0.955 0.948 0.895 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
81. R07G3.5 pgam-5 11646 7.604 0.961 0.985 0.959 0.985 0.940 0.948 0.942 0.884 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
82. F40G9.3 ubc-20 16785 7.604 0.915 0.985 0.974 0.985 0.957 0.929 0.906 0.953 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
83. B0547.1 csn-5 3568 7.604 0.940 0.944 0.959 0.944 0.975 0.968 0.938 0.936 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
84. B0205.7 kin-3 29775 7.603 0.920 0.970 0.937 0.970 0.967 0.957 0.952 0.930 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
85. C09G12.9 tsg-101 9451 7.603 0.946 0.968 0.955 0.968 0.950 0.910 0.963 0.943 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
86. C53D5.6 imb-3 28921 7.602 0.935 0.974 0.948 0.974 0.965 0.946 0.905 0.955 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
87. Y40B1B.5 eif-3.J 15061 7.601 0.944 0.975 0.926 0.975 0.973 0.930 0.928 0.950 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
88. T10C6.4 srx-44 8454 7.601 0.938 0.979 0.923 0.979 0.971 0.938 0.923 0.950 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
89. Y32F6A.3 pap-1 11972 7.6 0.970 0.974 0.939 0.974 0.935 0.950 0.955 0.903 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
90. F32A5.1 ada-2 8343 7.598 0.952 0.958 0.940 0.958 0.972 0.971 0.902 0.945 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
91. C28H8.9 dpff-1 8684 7.595 0.960 0.966 0.977 0.966 0.962 0.947 0.904 0.913 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
92. R151.8 R151.8 2527 7.595 0.943 0.940 0.959 0.940 0.955 0.954 0.940 0.964
93. T01G9.6 kin-10 27360 7.594 0.902 0.964 0.928 0.964 0.979 0.960 0.948 0.949 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
94. C48B6.6 smg-1 3784 7.594 0.957 0.939 0.984 0.939 0.965 0.952 0.943 0.915 Serine/threonine-protein kinase smg-1 [Source:UniProtKB/Swiss-Prot;Acc:O01510]
95. F45E12.3 cul-4 3393 7.593 0.952 0.952 0.973 0.952 0.964 0.941 0.927 0.932 Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q17392]
96. T06D8.8 rpn-9 11282 7.592 0.949 0.950 0.949 0.950 0.964 0.945 0.951 0.934 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
97. Y56A3A.20 ccf-1 18463 7.592 0.937 0.964 0.960 0.964 0.960 0.944 0.949 0.914 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
98. F26F4.10 rars-1 9971 7.592 0.975 0.962 0.929 0.962 0.956 0.948 0.930 0.930 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
99. C29E4.2 kle-2 5527 7.591 0.961 0.955 0.946 0.955 0.965 0.948 0.921 0.940 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
100. F56D1.4 clr-1 8615 7.589 0.921 0.968 0.950 0.968 0.963 0.963 0.960 0.896 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA