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Results for Y48G8AL.1

Gene ID Gene Name Reads Transcripts Annotation
Y48G8AL.1 herc-1 3873 Y48G8AL.1a, Y48G8AL.1b, Y48G8AL.1c, Y48G8AL.1d, Y48G8AL.1e HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]

Genes with expression patterns similar to Y48G8AL.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48G8AL.1 herc-1 3873 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
2. K07C5.8 cash-1 10523 7.634 0.952 0.970 0.953 0.970 0.958 0.949 0.953 0.929 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
3. D2089.1 rsp-7 11057 7.634 0.935 0.974 0.947 0.974 0.951 0.975 0.951 0.927 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
4. F41E6.4 smk-1 22394 7.634 0.947 0.975 0.947 0.975 0.956 0.960 0.927 0.947 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
5. F48E8.6 disl-2 8774 7.63 0.933 0.968 0.954 0.968 0.954 0.974 0.932 0.947 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
6. F58G11.1 letm-1 13414 7.613 0.918 0.969 0.955 0.969 0.971 0.957 0.948 0.926 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
7. W03F9.5 ttb-1 8682 7.609 0.960 0.965 0.932 0.965 0.972 0.966 0.932 0.917 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
8. R10H10.1 lpd-8 4272 7.603 0.950 0.928 0.956 0.928 0.990 0.957 0.932 0.962 LiPid Depleted [Source:RefSeq peptide;Acc:NP_501917]
9. F39B2.10 dnj-12 35162 7.602 0.917 0.972 0.966 0.972 0.931 0.972 0.932 0.940 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
10. T01G1.3 sec-31 10504 7.601 0.943 0.981 0.948 0.981 0.933 0.979 0.883 0.953 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
11. T12E12.4 drp-1 7694 7.6 0.941 0.975 0.933 0.975 0.945 0.957 0.919 0.955 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
12. C50C3.6 prp-8 19582 7.599 0.965 0.964 0.965 0.964 0.920 0.973 0.905 0.943 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
13. Y48G8AL.6 smg-2 12561 7.597 0.962 0.970 0.931 0.970 0.946 0.970 0.929 0.919 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
14. Y92C3B.2 uaf-1 14981 7.596 0.941 0.981 0.972 0.981 0.970 0.951 0.881 0.919 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
15. Y38A8.2 pbs-3 18117 7.593 0.929 0.961 0.940 0.961 0.956 0.964 0.950 0.932 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
16. F39H11.5 pbs-7 13631 7.59 0.913 0.977 0.946 0.977 0.955 0.957 0.942 0.923 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
17. Y54E10A.3 txl-1 5426 7.59 0.922 0.974 0.931 0.974 0.965 0.934 0.955 0.935 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
18. C27D11.1 egl-45 28282 7.589 0.929 0.945 0.965 0.945 0.962 0.972 0.934 0.937 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
19. K08D12.1 pbs-1 21677 7.586 0.933 0.974 0.931 0.974 0.947 0.943 0.948 0.936 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
20. F28B3.7 him-1 18274 7.579 0.949 0.986 0.951 0.986 0.934 0.942 0.902 0.929 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
21. Y54E10A.9 vbh-1 28746 7.577 0.930 0.974 0.965 0.974 0.934 0.937 0.908 0.955 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
22. T10F2.1 gars-1 7204 7.577 0.945 0.948 0.955 0.948 0.961 0.974 0.912 0.934 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
23. T01G9.4 npp-2 5361 7.577 0.936 0.971 0.942 0.971 0.976 0.926 0.928 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
24. T21E12.4 dhc-1 20370 7.576 0.932 0.977 0.973 0.977 0.961 0.945 0.861 0.950 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
25. Y54E2A.11 eif-3.B 13795 7.574 0.920 0.957 0.964 0.957 0.971 0.973 0.932 0.900 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
26. Y81G3A.3 gcn-2 5831 7.572 0.963 0.972 0.937 0.972 0.983 0.978 0.886 0.881 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
27. K02F2.1 dpf-3 11465 7.571 0.952 0.964 0.942 0.964 0.959 0.977 0.923 0.890 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
28. Y47G6A.20 rnp-6 5542 7.57 0.920 0.969 0.955 0.969 0.939 0.983 0.899 0.936 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
29. K04G2.1 iftb-1 12590 7.569 0.898 0.960 0.960 0.960 0.950 0.952 0.919 0.970 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
30. F45E12.3 cul-4 3393 7.568 0.888 0.973 0.936 0.973 0.969 0.950 0.923 0.956 Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q17392]
31. Y55D9A.1 efa-6 10012 7.566 0.896 0.968 0.932 0.968 0.980 0.976 0.923 0.923 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
32. F18E2.3 scc-3 13464 7.565 0.947 0.972 0.928 0.972 0.972 0.941 0.919 0.914 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
33. K01C8.10 cct-4 15077 7.563 0.950 0.964 0.949 0.964 0.939 0.919 0.927 0.951 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
34. F57B9.5 byn-1 58236 7.563 0.930 0.967 0.944 0.967 0.928 0.977 0.909 0.941 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
35. T20H4.3 pars-1 8167 7.56 0.961 0.952 0.946 0.952 0.949 0.958 0.889 0.953 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
36. F11A10.4 mon-2 6726 7.557 0.957 0.967 0.940 0.967 0.966 0.930 0.913 0.917 Monensin-resistant homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19338]
37. T05F1.6 hsr-9 13312 7.555 0.957 0.983 0.954 0.983 0.918 0.936 0.916 0.908
38. B0205.7 kin-3 29775 7.555 0.930 0.946 0.955 0.946 0.937 0.961 0.914 0.966 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
39. Y67D8C.5 eel-1 30623 7.554 0.945 0.963 0.973 0.963 0.938 0.935 0.885 0.952 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
40. F35G12.2 idhg-1 30065 7.554 0.918 0.953 0.951 0.953 0.954 0.975 0.933 0.917 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
41. F28D9.1 rsr-1 4282 7.553 0.929 0.983 0.921 0.983 0.933 0.967 0.892 0.945 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
42. C08C3.4 cyk-7 12075 7.553 0.953 0.950 0.959 0.950 0.977 0.958 0.935 0.871 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
43. C17H12.1 dyci-1 9858 7.552 0.952 0.973 0.952 0.973 0.951 0.940 0.933 0.878 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
44. ZK20.3 rad-23 35070 7.55 0.936 0.969 0.952 0.969 0.945 0.939 0.908 0.932
45. H06H21.3 eif-1.A 40990 7.548 0.914 0.959 0.963 0.959 0.949 0.962 0.939 0.903 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
46. Y40B1B.5 eif-3.J 15061 7.546 0.944 0.967 0.979 0.967 0.924 0.941 0.891 0.933 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
47. ZC518.2 sec-24.2 13037 7.546 0.966 0.956 0.976 0.956 0.950 0.914 0.894 0.934 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
48. F10G8.3 rae-1 7542 7.545 0.935 0.963 0.970 0.963 0.922 0.929 0.933 0.930 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
49. F20D12.1 csr-1 16351 7.545 0.932 0.965 0.974 0.965 0.959 0.952 0.899 0.899 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
50. Y113G7B.23 swsn-1 13766 7.543 0.936 0.977 0.949 0.977 0.924 0.951 0.895 0.934 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
51. T01G9.6 kin-10 27360 7.543 0.902 0.959 0.951 0.959 0.958 0.948 0.921 0.945 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
52. T27A3.2 usp-5 11388 7.54 0.943 0.968 0.930 0.968 0.966 0.925 0.905 0.935 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
53. B0511.10 eif-3.E 10041 7.539 0.936 0.945 0.955 0.945 0.955 0.974 0.914 0.915 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
54. C36B1.4 pas-4 13140 7.539 0.907 0.966 0.942 0.966 0.956 0.975 0.950 0.877 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
55. F30F8.8 taf-5 2008 7.538 0.873 0.987 0.940 0.987 0.951 0.945 0.919 0.936 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_492169]
56. C02F5.9 pbs-6 20120 7.538 0.929 0.975 0.941 0.975 0.951 0.931 0.932 0.904 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
57. K10D2.3 cid-1 7175 7.538 0.932 0.979 0.951 0.979 0.949 0.967 0.884 0.897 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
58. F01G4.3 skih-2 3353 7.537 0.907 0.964 0.937 0.964 0.957 0.954 0.905 0.949 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
59. F16D3.2 rsd-6 8211 7.536 0.895 0.970 0.927 0.970 0.975 0.954 0.914 0.931
60. F59B2.7 rab-6.1 10749 7.534 0.948 0.934 0.943 0.934 0.958 0.935 0.914 0.968 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
61. C47B2.4 pbs-2 19805 7.532 0.938 0.972 0.945 0.972 0.937 0.932 0.920 0.916 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
62. Y53C12A.4 mop-25.2 7481 7.531 0.897 0.978 0.928 0.978 0.945 0.950 0.931 0.924 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
63. R02D3.5 fnta-1 5258 7.529 0.927 0.966 0.956 0.966 0.925 0.963 0.865 0.961 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
64. T10C6.4 srx-44 8454 7.527 0.926 0.955 0.934 0.955 0.944 0.952 0.927 0.934 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
65. Y102A5A.1 cand-1 11808 7.526 0.943 0.965 0.956 0.965 0.933 0.932 0.919 0.913 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
66. T05H4.6 erfa-1 12542 7.526 0.932 0.966 0.974 0.966 0.898 0.952 0.900 0.938 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
67. C18D11.4 rsp-8 18308 7.525 0.928 0.958 0.935 0.958 0.939 0.953 0.912 0.942 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
68. T26A5.6 T26A5.6 9194 7.524 0.927 0.955 0.940 0.955 0.965 0.957 0.923 0.902
69. F58B6.3 par-2 3914 7.523 0.946 0.967 0.920 0.967 0.949 0.961 0.934 0.879
70. D1081.9 D1081.9 3792 7.522 0.914 0.963 0.947 0.963 0.960 0.976 0.913 0.886
71. T06D8.6 cchl-1 26292 7.522 0.922 0.964 0.952 0.964 0.956 0.958 0.911 0.895 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
72. F56A8.6 cpf-2 2730 7.521 0.932 0.963 0.935 0.963 0.948 0.983 0.913 0.884 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
73. C36B1.8 gls-1 8617 7.52 0.937 0.959 0.924 0.959 0.944 0.937 0.912 0.948 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
74. F15B9.4 inft-2 5927 7.518 0.937 0.959 0.956 0.959 0.961 0.932 0.921 0.893 INverted Formin/formin Three-related [Source:RefSeq peptide;Acc:NP_506253]
75. Y73B6BL.5 seu-1 8719 7.518 0.947 0.963 0.966 0.963 0.964 0.956 0.870 0.889 Suppressor of Ectopic Unc-5 [Source:RefSeq peptide;Acc:NP_001293775]
76. T27E9.7 abcf-2 40273 7.518 0.925 0.938 0.977 0.938 0.954 0.923 0.936 0.927 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
77. Y39G10AR.9 Y39G10AR.9 3972 7.516 0.942 0.970 0.963 0.970 0.913 0.944 0.892 0.922
78. F45H11.3 hpo-35 8299 7.515 0.966 0.965 0.953 0.965 0.952 0.943 0.905 0.866
79. Y61A9LA.8 sut-2 11388 7.515 0.937 0.960 0.933 0.960 0.941 0.943 0.903 0.938 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
80. T20F5.7 T20F5.7 5210 7.515 0.933 0.937 0.946 0.937 0.951 0.971 0.939 0.901
81. ZC404.9 gck-2 8382 7.514 0.939 0.962 0.947 0.962 0.970 0.936 0.885 0.913 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
82. T12D8.6 mlc-5 19567 7.514 0.894 0.970 0.945 0.970 0.925 0.943 0.921 0.946 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
83. F17C11.10 F17C11.10 4355 7.513 0.919 0.956 0.947 0.956 0.950 0.968 0.897 0.920
84. F32D1.9 fipp-1 10239 7.513 0.918 0.967 0.934 0.967 0.978 0.960 0.946 0.843 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
85. F46B6.3 smg-4 4959 7.513 0.965 0.945 0.942 0.945 0.930 0.925 0.922 0.939 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
86. C29E4.2 kle-2 5527 7.512 0.949 0.959 0.920 0.959 0.957 0.974 0.894 0.900 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
87. F31D4.3 fkb-6 21313 7.512 0.927 0.970 0.967 0.970 0.937 0.952 0.901 0.888 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
88. K11D12.2 pqn-51 15951 7.511 0.948 0.983 0.947 0.983 0.905 0.945 0.887 0.913 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
89. Y56A3A.1 ntl-3 10450 7.511 0.944 0.962 0.899 0.962 0.935 0.949 0.914 0.946 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
90. C52E4.6 cyl-1 6405 7.51 0.947 0.968 0.910 0.968 0.902 0.956 0.910 0.949 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
91. F39B2.11 mtx-1 8526 7.51 0.938 0.944 0.971 0.944 0.953 0.944 0.920 0.896 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
92. Y73F8A.34 tag-349 7966 7.51 0.928 0.947 0.923 0.947 0.963 0.962 0.921 0.919
93. Y73B6BL.6 sqd-1 41708 7.509 0.931 0.970 0.952 0.970 0.929 0.905 0.922 0.930 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
94. Y17G7B.17 Y17G7B.17 11197 7.508 0.912 0.973 0.905 0.973 0.975 0.947 0.918 0.905
95. ZK287.5 rbx-1 13546 7.508 0.930 0.953 0.912 0.953 0.979 0.925 0.963 0.893 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
96. Y105E8A.17 ekl-4 4732 7.506 0.919 0.976 0.926 0.976 0.948 0.946 0.917 0.898
97. T20H4.4 adr-2 5495 7.505 0.918 0.949 0.927 0.949 0.976 0.944 0.920 0.922 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
98. ZK328.5 npp-10 7652 7.505 0.902 0.970 0.921 0.970 0.945 0.968 0.898 0.931 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
99. C09G4.1 hyl-1 8815 7.505 0.891 0.944 0.962 0.944 0.953 0.969 0.925 0.917 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
100. Y56A3A.20 ccf-1 18463 7.504 0.928 0.969 0.952 0.969 0.932 0.926 0.892 0.936 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA