C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F25D1.1

Gene ID Gene Name Reads Transcripts Annotation
F25D1.1 ppm-1 16992 F25D1.1a, F25D1.1b, F25D1.1c.1, F25D1.1c.2, F25D1.1c.3 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]

Genes with expression patterns similar to F25D1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F25D1.1 ppm-1 16992 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
2. D1014.3 snap-1 16776 7.713 0.970 0.985 0.984 0.985 0.976 0.952 0.927 0.934 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
3. F38H4.9 let-92 25368 7.708 0.979 0.982 0.974 0.982 0.985 0.952 0.943 0.911 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
4. C09G12.9 tsg-101 9451 7.688 0.974 0.962 0.968 0.962 0.976 0.948 0.966 0.932 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
5. R07G3.1 cdc-42 35737 7.679 0.975 0.987 0.987 0.987 0.987 0.892 0.912 0.952 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
6. K02F2.1 dpf-3 11465 7.666 0.962 0.985 0.985 0.985 0.974 0.963 0.902 0.910 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
7. T12D8.6 mlc-5 19567 7.662 0.966 0.980 0.978 0.980 0.978 0.971 0.959 0.850 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
8. Y111B2A.11 epc-1 8915 7.66 0.970 0.968 0.951 0.968 0.970 0.960 0.926 0.947 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
9. K08D12.1 pbs-1 21677 7.65 0.970 0.986 0.982 0.986 0.987 0.982 0.912 0.845 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
10. F08F8.3 kap-1 31437 7.646 0.975 0.979 0.971 0.979 0.967 0.952 0.905 0.918 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
11. Y57A10A.18 pqn-87 31844 7.641 0.926 0.975 0.971 0.975 0.961 0.959 0.962 0.912 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
12. F26E4.11 hrdl-1 14721 7.64 0.911 0.977 0.959 0.977 0.974 0.975 0.916 0.951 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
13. F33D11.11 vpr-1 18001 7.639 0.939 0.973 0.947 0.973 0.978 0.977 0.938 0.914 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
14. K10C3.2 ensa-1 19836 7.638 0.953 0.981 0.974 0.981 0.972 0.977 0.936 0.864 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
15. ZC395.3 toc-1 6437 7.636 0.960 0.978 0.982 0.978 0.953 0.961 0.905 0.919 similar to Transporter Of divalent Cations [Source:RefSeq peptide;Acc:NP_001033385]
16. R05D11.3 ran-4 15494 7.635 0.967 0.975 0.974 0.975 0.949 0.951 0.937 0.907 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
17. ZK20.3 rad-23 35070 7.634 0.977 0.983 0.990 0.983 0.984 0.982 0.922 0.813
18. Y56A3A.20 ccf-1 18463 7.63 0.972 0.977 0.974 0.977 0.962 0.950 0.926 0.892 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
19. B0261.2 let-363 8628 7.627 0.966 0.973 0.967 0.973 0.944 0.973 0.939 0.892 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
20. T07A5.2 unc-50 4604 7.627 0.958 0.962 0.970 0.962 0.970 0.964 0.918 0.923
21. ZK652.3 ufm-1 12647 7.627 0.976 0.971 0.978 0.971 0.947 0.965 0.926 0.893 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
22. C46C2.1 wnk-1 15184 7.62 0.937 0.976 0.977 0.976 0.967 0.939 0.923 0.925 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
23. Y38A8.2 pbs-3 18117 7.62 0.980 0.969 0.975 0.969 0.978 0.975 0.932 0.842 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
24. Y113G7B.23 swsn-1 13766 7.612 0.955 0.988 0.970 0.988 0.971 0.968 0.921 0.851 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
25. F39B2.11 mtx-1 8526 7.609 0.969 0.970 0.973 0.970 0.983 0.963 0.891 0.890 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
26. F26E4.1 sur-6 16191 7.608 0.948 0.987 0.943 0.987 0.981 0.937 0.940 0.885 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
27. R144.4 wip-1 14168 7.606 0.959 0.978 0.978 0.978 0.976 0.967 0.911 0.859 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
28. F40F12.5 cyld-1 10757 7.603 0.959 0.981 0.962 0.981 0.960 0.919 0.934 0.907 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
29. F39B2.10 dnj-12 35162 7.603 0.933 0.968 0.974 0.968 0.981 0.970 0.950 0.859 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
30. K10B2.1 lin-23 15896 7.603 0.957 0.978 0.961 0.978 0.968 0.955 0.913 0.893 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
31. Y53C12A.4 mop-25.2 7481 7.598 0.963 0.988 0.976 0.988 0.950 0.985 0.915 0.833 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
32. C17H12.1 dyci-1 9858 7.59 0.952 0.981 0.987 0.981 0.981 0.964 0.949 0.795 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
33. T24C4.6 zer-1 16051 7.588 0.921 0.970 0.951 0.970 0.969 0.954 0.920 0.933 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
34. F41E6.9 vps-60 4469 7.585 0.977 0.950 0.985 0.950 0.973 0.959 0.950 0.841 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
35. Y65B4BR.4 wwp-1 23206 7.585 0.972 0.977 0.980 0.977 0.976 0.945 0.876 0.882 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
36. C15H11.4 dhs-22 21674 7.583 0.984 0.973 0.973 0.973 0.956 0.932 0.884 0.908 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
37. C47E12.5 uba-1 36184 7.583 0.970 0.980 0.984 0.980 0.962 0.959 0.870 0.878 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
38. ZC518.3 ccr-4 15531 7.583 0.924 0.970 0.950 0.970 0.962 0.973 0.946 0.888 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
39. F39H11.5 pbs-7 13631 7.582 0.954 0.977 0.979 0.977 0.977 0.964 0.933 0.821 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
40. Y55D9A.1 efa-6 10012 7.581 0.932 0.978 0.986 0.978 0.967 0.947 0.924 0.869 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
41. M7.1 let-70 85699 7.579 0.919 0.975 0.969 0.975 0.978 0.939 0.954 0.870 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
42. R01B10.5 jamp-1 10072 7.575 0.965 0.980 0.981 0.980 0.972 0.944 0.909 0.844 JAMP (JNK1-Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_504568]
43. Y71H2B.10 apb-1 10457 7.575 0.972 0.983 0.965 0.983 0.965 0.933 0.873 0.901 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]
44. F36D4.3 hum-2 16493 7.575 0.972 0.981 0.965 0.981 0.947 0.952 0.919 0.858 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
45. ZK858.1 gld-4 14162 7.574 0.984 0.962 0.974 0.962 0.969 0.967 0.886 0.870 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
46. F54D5.8 dnj-13 18315 7.573 0.957 0.979 0.976 0.979 0.952 0.937 0.894 0.899 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_496468]
47. C18D11.4 rsp-8 18308 7.571 0.938 0.964 0.958 0.964 0.982 0.980 0.917 0.868 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
48. F58G11.1 letm-1 13414 7.569 0.963 0.972 0.971 0.972 0.971 0.967 0.907 0.846 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
49. F46F3.4 ape-1 8747 7.567 0.932 0.959 0.929 0.959 0.974 0.975 0.883 0.956 Apoptotic enhancer 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9XVN3]
50. Y48A6B.13 spat-2 21773 7.563 0.940 0.961 0.955 0.961 0.958 0.946 0.907 0.935 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
51. B0286.4 ntl-2 14207 7.563 0.944 0.981 0.959 0.981 0.958 0.930 0.958 0.852 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
52. F44B9.8 F44B9.8 1978 7.563 0.961 0.981 0.975 0.981 0.973 0.967 0.911 0.814 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
53. C39E9.14 dli-1 5650 7.562 0.953 0.968 0.969 0.968 0.950 0.946 0.906 0.902 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
54. D1022.7 aka-1 10681 7.56 0.944 0.978 0.979 0.978 0.968 0.944 0.901 0.868 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
55. D1022.1 ubc-6 9722 7.559 0.984 0.983 0.970 0.983 0.950 0.922 0.905 0.862 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
56. C02F5.9 pbs-6 20120 7.557 0.979 0.981 0.977 0.981 0.966 0.955 0.918 0.800 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
57. F40G9.3 ubc-20 16785 7.555 0.951 0.968 0.965 0.968 0.981 0.976 0.924 0.822 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
58. R10E11.1 cbp-1 20447 7.554 0.958 0.989 0.969 0.989 0.969 0.919 0.918 0.843
59. F54C8.5 rheb-1 6358 7.554 0.973 0.974 0.972 0.974 0.944 0.941 0.872 0.904 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
60. C50C3.6 prp-8 19582 7.553 0.942 0.966 0.970 0.966 0.964 0.965 0.925 0.855 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
61. Y71G12B.15 ubc-3 9409 7.553 0.957 0.980 0.964 0.980 0.961 0.936 0.886 0.889 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
62. ZK370.5 pdhk-2 9358 7.552 0.987 0.988 0.975 0.988 0.969 0.949 0.876 0.820 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
63. Y67D8C.5 eel-1 30623 7.552 0.910 0.948 0.966 0.948 0.989 0.964 0.948 0.879 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
64. F43E2.7 mtch-1 30689 7.552 0.949 0.969 0.960 0.969 0.945 0.933 0.915 0.912 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
65. Y77E11A.13 npp-20 5777 7.552 0.968 0.957 0.973 0.957 0.966 0.962 0.895 0.874 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
66. T04D1.3 unc-57 12126 7.55 0.968 0.979 0.977 0.979 0.972 0.950 0.844 0.881 Endophilin [Source:UniProtKB/TrEMBL;Acc:Q6TM46]
67. F39B2.2 uev-1 13597 7.55 0.954 0.966 0.967 0.966 0.969 0.964 0.921 0.843 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
68. C33H5.17 zgpa-1 7873 7.55 0.955 0.980 0.947 0.980 0.968 0.968 0.848 0.904 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
69. ZC262.3 iglr-2 6268 7.55 0.968 0.957 0.962 0.957 0.972 0.987 0.905 0.842 Immunoglobulin domain and leucine-rich repeat-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34595]
70. C50F4.14 nstp-10 4932 7.549 0.943 0.966 0.969 0.966 0.956 0.979 0.847 0.923 GDP-fucose transporter [Source:UniProtKB/Swiss-Prot;Acc:Q968A5]
71. T05B11.3 clic-1 19766 7.548 0.952 0.973 0.963 0.973 0.975 0.934 0.880 0.898 Clathrin LIght Chain [Source:RefSeq peptide;Acc:NP_504999]
72. C06C3.1 mel-11 10375 7.547 0.942 0.981 0.931 0.981 0.963 0.925 0.874 0.950 MEL-11; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEB3]
73. C04G6.3 pld-1 6341 7.545 0.927 0.968 0.958 0.968 0.958 0.973 0.862 0.931 PhosphoLipase D [Source:RefSeq peptide;Acc:NP_494939]
74. F25D7.2 tag-353 21026 7.545 0.962 0.982 0.980 0.982 0.977 0.936 0.884 0.842
75. T12E12.4 drp-1 7694 7.544 0.976 0.978 0.983 0.978 0.956 0.958 0.879 0.836 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
76. F41E6.4 smk-1 22394 7.544 0.931 0.973 0.964 0.973 0.982 0.966 0.932 0.823 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
77. Y102A5A.1 cand-1 11808 7.544 0.963 0.979 0.957 0.979 0.971 0.964 0.900 0.831 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
78. F32A5.1 ada-2 8343 7.544 0.924 0.979 0.966 0.979 0.966 0.954 0.877 0.899 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
79. F56D1.4 clr-1 8615 7.543 0.883 0.974 0.938 0.974 0.959 0.960 0.926 0.929 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
80. C27F2.10 C27F2.10 4214 7.543 0.943 0.975 0.920 0.975 0.981 0.953 0.909 0.887 PCI domain-containing protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95QU0]
81. F23B12.6 fntb-1 4392 7.542 0.976 0.976 0.970 0.976 0.965 0.936 0.871 0.872 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
82. Y73B6BL.6 sqd-1 41708 7.541 0.927 0.967 0.943 0.967 0.985 0.944 0.935 0.873 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
83. C39F7.4 rab-1 44088 7.54 0.961 0.977 0.958 0.977 0.973 0.917 0.899 0.878 RAB family [Source:RefSeq peptide;Acc:NP_503397]
84. K07C5.8 cash-1 10523 7.538 0.974 0.987 0.979 0.987 0.969 0.941 0.922 0.779 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
85. C07A9.3 tlk-1 12572 7.536 0.929 0.961 0.961 0.961 0.951 0.955 0.929 0.889 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
86. Y57E12AM.1 Y57E12AM.1 10510 7.534 0.951 0.928 0.955 0.928 0.971 0.963 0.930 0.908 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
87. K01G5.9 K01G5.9 2321 7.533 0.960 0.961 0.975 0.961 0.962 0.969 0.936 0.809
88. Y32F6A.3 pap-1 11972 7.533 0.962 0.974 0.984 0.974 0.951 0.962 0.937 0.789 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
89. F25B3.1 ehbp-1 6409 7.532 0.954 0.980 0.964 0.980 0.967 0.878 0.909 0.900 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
90. B0464.5 spk-1 35112 7.531 0.951 0.970 0.975 0.970 0.956 0.955 0.904 0.850 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
91. F52B11.1 cfp-1 8570 7.53 0.952 0.954 0.959 0.954 0.966 0.936 0.902 0.907 CFP1 (CpG-binding protein, CXXC Finger Protein 1) homolog [Source:RefSeq peptide;Acc:NP_001023214]
92. Y79H2A.6 arx-3 17398 7.53 0.969 0.973 0.968 0.973 0.951 0.899 0.870 0.927 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
93. F10F2.1 sel-2 8706 7.529 0.964 0.947 0.953 0.947 0.968 0.947 0.859 0.944 Putative neurobeachin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19317]
94. Y104H12BR.1 plst-1 9556 7.529 0.962 0.959 0.966 0.959 0.974 0.985 0.813 0.911 PLaSTin (actin bundling protein) homolog [Source:RefSeq peptide;Acc:NP_001294438]
95. ZK353.7 cutc-1 5788 7.528 0.977 0.934 0.970 0.934 0.940 0.959 0.926 0.888 Copper homeostasis protein cutC homolog [Source:UniProtKB/Swiss-Prot;Acc:P34630]
96. F13G3.10 F13G3.10 8898 7.528 0.960 0.953 0.971 0.953 0.918 0.933 0.907 0.933
97. F10D11.1 sod-2 7480 7.527 0.936 0.969 0.967 0.969 0.965 0.974 0.911 0.836 Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P31161]
98. C47G2.5 saps-1 7555 7.526 0.962 0.976 0.948 0.976 0.984 0.964 0.907 0.809 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
99. F52C12.4 denn-4 4398 7.525 0.931 0.953 0.939 0.953 0.972 0.971 0.924 0.882 DENN domain type RAB GEF [Source:RefSeq peptide;Acc:NP_001294384]
100. ZK616.6 perm-3 16186 7.525 0.959 0.970 0.966 0.970 0.950 0.929 0.912 0.869 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]

There are 3019 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA