C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for K04G7.10

Gene ID Gene Name Reads Transcripts Annotation
K04G7.10 rnp-7 11219 K04G7.10.1, K04G7.10.2 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]

Genes with expression patterns similar to K04G7.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. K04G7.10 rnp-7 11219 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
2. H19N07.1 erfa-3 19869 7.704 0.968 0.976 0.964 0.976 0.969 0.969 0.925 0.957 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
3. C18D11.4 rsp-8 18308 7.682 0.938 0.983 0.949 0.983 0.979 0.959 0.947 0.944 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
4. B0205.7 kin-3 29775 7.677 0.979 0.965 0.982 0.965 0.973 0.957 0.931 0.925 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
5. T08B2.9 fars-1 12650 7.675 0.969 0.970 0.972 0.970 0.929 0.968 0.938 0.959 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
6. T27F7.3 eif-1 28176 7.674 0.973 0.954 0.965 0.954 0.981 0.966 0.930 0.951 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
7. Y102A5A.1 cand-1 11808 7.673 0.959 0.977 0.965 0.977 0.970 0.976 0.924 0.925 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
8. Y40B1B.5 eif-3.J 15061 7.672 0.967 0.975 0.964 0.975 0.981 0.971 0.920 0.919 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
9. Y73B6BL.6 sqd-1 41708 7.67 0.971 0.974 0.972 0.974 0.977 0.968 0.921 0.913 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
10. D2013.7 eif-3.F 21004 7.669 0.972 0.959 0.978 0.959 0.970 0.967 0.916 0.948 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
11. R144.7 larp-1 24669 7.669 0.969 0.962 0.969 0.962 0.963 0.948 0.947 0.949 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
12. F39B2.10 dnj-12 35162 7.666 0.974 0.983 0.947 0.983 0.955 0.962 0.931 0.931 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
13. F08F8.3 kap-1 31437 7.665 0.961 0.969 0.944 0.969 0.976 0.964 0.927 0.955 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
14. B0464.1 dars-1 12331 7.665 0.973 0.963 0.968 0.963 0.974 0.938 0.945 0.941 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
15. F26F4.10 rars-1 9971 7.665 0.954 0.961 0.970 0.961 0.966 0.974 0.940 0.939 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
16. T05H4.6 erfa-1 12542 7.652 0.970 0.954 0.973 0.954 0.964 0.965 0.936 0.936 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
17. Y54E10A.9 vbh-1 28746 7.645 0.984 0.967 0.960 0.967 0.973 0.936 0.935 0.923 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
18. C34E10.1 gop-3 11393 7.635 0.958 0.961 0.958 0.961 0.980 0.972 0.902 0.943 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
19. T17E9.2 nmt-1 8017 7.634 0.960 0.978 0.964 0.978 0.962 0.958 0.913 0.921 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
20. K04G2.1 iftb-1 12590 7.633 0.961 0.976 0.967 0.976 0.966 0.948 0.919 0.920 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
21. F57B9.2 let-711 8592 7.633 0.947 0.958 0.945 0.958 0.974 0.977 0.925 0.949 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
22. K08F11.3 cif-1 10218 7.632 0.973 0.962 0.952 0.962 0.961 0.950 0.932 0.940 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
23. F58D5.1 hrp-2 17211 7.631 0.955 0.974 0.984 0.974 0.949 0.943 0.920 0.932 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
24. Y67D8C.5 eel-1 30623 7.631 0.959 0.961 0.970 0.961 0.967 0.933 0.940 0.940 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
25. K11D12.2 pqn-51 15951 7.63 0.943 0.972 0.951 0.972 0.959 0.974 0.924 0.935 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
26. H21P03.1 mbf-1 25586 7.63 0.981 0.964 0.960 0.964 0.961 0.946 0.885 0.969 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
27. F43E2.7 mtch-1 30689 7.629 0.926 0.967 0.965 0.967 0.971 0.951 0.950 0.932 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
28. F42A6.7 hrp-1 28201 7.628 0.952 0.971 0.959 0.971 0.960 0.942 0.937 0.936 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
29. Y48A6B.13 spat-2 21773 7.625 0.938 0.980 0.951 0.980 0.971 0.964 0.913 0.928 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
30. F13G3.4 dylt-1 21345 7.625 0.950 0.966 0.970 0.966 0.959 0.969 0.915 0.930 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
31. Y57A10A.18 pqn-87 31844 7.624 0.923 0.977 0.964 0.977 0.963 0.970 0.916 0.934 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
32. F10G8.3 rae-1 7542 7.622 0.965 0.973 0.963 0.973 0.968 0.953 0.915 0.912 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
33. M03C11.5 ymel-1 6878 7.622 0.941 0.954 0.961 0.954 0.947 0.972 0.958 0.935 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
34. Y65B4BR.5 icd-2 58321 7.621 0.976 0.949 0.963 0.949 0.966 0.945 0.943 0.930 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
35. T16G1.11 eif-3.K 14014 7.62 0.971 0.964 0.964 0.964 0.953 0.942 0.932 0.930 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
36. Y116A8C.35 uaf-2 13808 7.619 0.950 0.981 0.948 0.981 0.969 0.946 0.929 0.915 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
37. T05C3.5 dnj-19 20420 7.618 0.930 0.970 0.958 0.970 0.972 0.939 0.929 0.950 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
38. F35G12.2 idhg-1 30065 7.618 0.970 0.978 0.978 0.978 0.950 0.957 0.917 0.890 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
39. C15H11.4 dhs-22 21674 7.617 0.931 0.969 0.958 0.969 0.966 0.963 0.911 0.950 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
40. C18E9.6 tomm-40 13426 7.617 0.976 0.967 0.970 0.967 0.954 0.965 0.932 0.886 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
41. C50C3.6 prp-8 19582 7.617 0.944 0.976 0.945 0.976 0.973 0.961 0.920 0.922 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
42. C34E10.5 prmt-5 12277 7.616 0.966 0.974 0.970 0.974 0.948 0.945 0.918 0.921 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
43. T10F2.4 prp-19 11298 7.616 0.959 0.974 0.950 0.974 0.971 0.938 0.927 0.923 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
44. ZK616.6 perm-3 16186 7.614 0.943 0.964 0.945 0.964 0.965 0.973 0.931 0.929 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
45. T10B5.5 cct-7 24616 7.614 0.946 0.974 0.969 0.974 0.951 0.947 0.882 0.971 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
46. T12D8.8 hip-1 18283 7.61 0.936 0.958 0.958 0.958 0.972 0.952 0.945 0.931 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
47. R05D11.3 ran-4 15494 7.61 0.946 0.961 0.953 0.961 0.968 0.955 0.916 0.950 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
48. F33D11.11 vpr-1 18001 7.609 0.898 0.975 0.955 0.975 0.968 0.971 0.912 0.955 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
49. F57B9.5 byn-1 58236 7.608 0.985 0.972 0.937 0.972 0.964 0.952 0.918 0.908 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
50. B0261.4 mrpl-47 8210 7.606 0.972 0.961 0.939 0.961 0.941 0.946 0.927 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
51. T11G6.1 hars-1 7908 7.606 0.958 0.968 0.965 0.968 0.961 0.936 0.911 0.939 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
52. F32E10.4 ima-3 35579 7.605 0.972 0.965 0.949 0.965 0.972 0.961 0.889 0.932 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
53. F22D6.3 nars-1 18624 7.603 0.941 0.972 0.952 0.972 0.970 0.953 0.915 0.928 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
54. C08B11.5 sap-49 10553 7.602 0.948 0.976 0.968 0.976 0.967 0.942 0.936 0.889 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
55. Y39G8C.1 xrn-1 7488 7.602 0.955 0.965 0.941 0.965 0.937 0.974 0.940 0.925 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
56. H20J04.5 pfd-2 8082 7.599 0.973 0.963 0.946 0.963 0.934 0.939 0.919 0.962 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
57. R13F6.10 cra-1 11610 7.599 0.956 0.970 0.981 0.970 0.968 0.933 0.910 0.911 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
58. F28H1.3 aars-2 13537 7.598 0.945 0.978 0.971 0.978 0.943 0.948 0.891 0.944 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
59. W04D2.5 mrps-11 5757 7.598 0.977 0.938 0.965 0.938 0.941 0.947 0.948 0.944 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
60. F54A3.3 cct-3 25183 7.597 0.984 0.968 0.970 0.968 0.949 0.957 0.858 0.943 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
61. ZK1058.4 ccdc-47 8879 7.593 0.924 0.964 0.956 0.964 0.966 0.962 0.903 0.954 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
62. C52E4.6 cyl-1 6405 7.593 0.952 0.972 0.930 0.972 0.950 0.956 0.915 0.946 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
63. C30C11.4 hsp-110 27892 7.593 0.965 0.977 0.967 0.977 0.927 0.969 0.858 0.953 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_498868]
64. C53D5.6 imb-3 28921 7.592 0.976 0.980 0.962 0.980 0.969 0.902 0.942 0.881 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
65. T01E8.6 mrps-14 9328 7.591 0.966 0.979 0.959 0.979 0.925 0.945 0.911 0.927 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
66. C26D10.2 hel-1 28697 7.59 0.967 0.973 0.952 0.973 0.955 0.917 0.937 0.916 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
67. C09D4.5 rpl-19 56944 7.59 0.965 0.940 0.938 0.940 0.973 0.952 0.941 0.941 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
68. R07B7.3 pqn-53 10459 7.589 0.960 0.945 0.961 0.945 0.962 0.957 0.903 0.956 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
69. C18A3.5 tiar-1 25400 7.589 0.931 0.976 0.952 0.976 0.958 0.944 0.920 0.932 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
70. Y39G10AR.9 Y39G10AR.9 3972 7.588 0.975 0.950 0.954 0.950 0.959 0.967 0.905 0.928
71. F36A4.7 ama-1 13620 7.586 0.915 0.972 0.962 0.972 0.973 0.956 0.930 0.906 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
72. C47D12.6 tars-1 23488 7.585 0.956 0.964 0.957 0.964 0.971 0.957 0.888 0.928 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
73. T05C12.7 cct-1 41264 7.584 0.957 0.977 0.962 0.977 0.941 0.951 0.864 0.955 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
74. F39B2.2 uev-1 13597 7.582 0.938 0.952 0.940 0.952 0.969 0.940 0.950 0.941 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
75. Y111B2A.18 rsp-3 43731 7.581 0.932 0.963 0.924 0.963 0.970 0.942 0.933 0.954 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
76. Y113G7B.23 swsn-1 13766 7.58 0.921 0.955 0.936 0.955 0.972 0.974 0.936 0.931 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
77. T01G9.6 kin-10 27360 7.579 0.972 0.971 0.972 0.971 0.967 0.937 0.880 0.909 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
78. ZK637.3 lnkn-1 16095 7.578 0.935 0.962 0.960 0.962 0.959 0.953 0.890 0.957 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
79. B0511.10 eif-3.E 10041 7.577 0.958 0.966 0.954 0.966 0.948 0.964 0.926 0.895 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
80. T27E9.7 abcf-2 40273 7.577 0.983 0.952 0.972 0.952 0.967 0.937 0.918 0.896 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
81. C39E9.14 dli-1 5650 7.577 0.911 0.959 0.959 0.959 0.966 0.971 0.909 0.943 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
82. T21B10.1 mrpl-50 14595 7.574 0.957 0.982 0.978 0.982 0.891 0.939 0.897 0.948 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
83. M7.1 let-70 85699 7.574 0.918 0.969 0.947 0.969 0.957 0.938 0.926 0.950 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
84. D2023.6 D2023.6 5595 7.574 0.935 0.964 0.918 0.964 0.958 0.955 0.937 0.943
85. K04D7.2 mspn-1 48187 7.573 0.978 0.924 0.935 0.924 0.966 0.966 0.926 0.954 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
86. F01F1.8 cct-6 29460 7.572 0.960 0.975 0.981 0.975 0.935 0.922 0.844 0.980 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
87. K01C8.10 cct-4 15077 7.572 0.945 0.970 0.960 0.970 0.951 0.909 0.928 0.939 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
88. F17C11.9 eef-1G 37911 7.571 0.972 0.954 0.929 0.954 0.958 0.921 0.933 0.950 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
89. T19B4.2 npp-7 13073 7.571 0.942 0.967 0.948 0.967 0.957 0.946 0.913 0.931 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
90. R11A8.5 pges-2 6290 7.571 0.930 0.958 0.926 0.958 0.960 0.964 0.916 0.959 ProstaGlandin E Synthase homolog [Source:RefSeq peptide;Acc:NP_501913]
91. Y56A3A.20 ccf-1 18463 7.57 0.920 0.953 0.943 0.953 0.971 0.980 0.923 0.927 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
92. T24H7.1 phb-2 28775 7.57 0.976 0.965 0.905 0.965 0.959 0.940 0.898 0.962 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
93. K07A12.7 mrps-15 6325 7.569 0.970 0.970 0.931 0.970 0.956 0.941 0.923 0.908 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
94. F22B5.9 fars-3 7209 7.569 0.976 0.947 0.962 0.947 0.949 0.936 0.905 0.947 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
95. F45H11.2 ned-8 13247 7.569 0.945 0.950 0.925 0.950 0.971 0.943 0.938 0.947 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
96. T21C9.12 scpl-4 14723 7.565 0.969 0.967 0.955 0.967 0.952 0.945 0.911 0.899 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
97. C25D7.8 otub-1 7941 7.565 0.956 0.951 0.952 0.951 0.952 0.958 0.894 0.951 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
98. EEED8.16 brap-2 3123 7.564 0.941 0.968 0.939 0.968 0.931 0.950 0.922 0.945 BRCA1-associated protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95QN6]
99. T26A5.9 dlc-1 59038 7.564 0.938 0.981 0.950 0.981 0.978 0.937 0.867 0.932 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
100. F56D2.6 ddx-15 12282 7.563 0.923 0.979 0.964 0.979 0.939 0.915 0.937 0.927 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]

There are 1968 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA