C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F38H4.9

Gene ID Gene Name Reads Transcripts Annotation
F38H4.9 let-92 25368 F38H4.9.1, F38H4.9.2 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]

Genes with expression patterns similar to F38H4.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F38H4.9 let-92 25368 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
2. T12D8.6 mlc-5 19567 7.804 0.971 0.982 0.984 0.982 0.991 0.955 0.969 0.970 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
3. D1014.3 snap-1 16776 7.769 0.972 0.973 0.966 0.973 0.983 0.988 0.950 0.964 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
4. M7.1 let-70 85699 7.762 0.960 0.973 0.958 0.973 0.985 0.984 0.957 0.972 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
5. ZK20.3 rad-23 35070 7.752 0.993 0.980 0.975 0.980 0.984 0.956 0.934 0.950
6. F48E8.5 paa-1 39773 7.748 0.949 0.982 0.963 0.982 0.973 0.989 0.958 0.952 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
7. R07G3.1 cdc-42 35737 7.747 0.985 0.989 0.979 0.989 0.988 0.960 0.907 0.950 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
8. K08D12.1 pbs-1 21677 7.73 0.989 0.980 0.942 0.980 0.983 0.953 0.945 0.958 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
9. Y71H2B.10 apb-1 10457 7.73 0.973 0.977 0.971 0.977 0.976 0.965 0.921 0.970 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]
10. Y65B4BR.4 wwp-1 23206 7.724 0.986 0.976 0.980 0.976 0.982 0.958 0.940 0.926 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
11. C43G2.1 paqr-1 17585 7.723 0.974 0.979 0.982 0.979 0.979 0.950 0.936 0.944 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
12. C09G12.9 tsg-101 9451 7.718 0.988 0.969 0.954 0.969 0.969 0.955 0.952 0.962 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
13. F41E6.9 vps-60 4469 7.715 0.972 0.973 0.982 0.973 0.969 0.936 0.959 0.951 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
14. ZC518.2 sec-24.2 13037 7.71 0.971 0.982 0.980 0.982 0.960 0.941 0.932 0.962 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
15. Y73B6BL.6 sqd-1 41708 7.71 0.971 0.972 0.965 0.972 0.981 0.951 0.922 0.976 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
16. C39F7.4 rab-1 44088 7.709 0.976 0.966 0.982 0.966 0.980 0.982 0.931 0.926 RAB family [Source:RefSeq peptide;Acc:NP_503397]
17. F25D1.1 ppm-1 16992 7.708 0.979 0.982 0.974 0.982 0.985 0.952 0.943 0.911 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
18. C47B2.4 pbs-2 19805 7.705 0.984 0.962 0.961 0.962 0.986 0.973 0.939 0.938 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
19. K10C8.3 istr-1 14718 7.704 0.969 0.979 0.968 0.979 0.966 0.960 0.946 0.937 Increased Sodium Tolerance Related [Source:RefSeq peptide;Acc:NP_506170]
20. K05C4.1 pbs-5 17648 7.704 0.977 0.972 0.967 0.972 0.984 0.977 0.914 0.941 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
21. Y38A8.2 pbs-3 18117 7.701 0.984 0.966 0.967 0.966 0.978 0.952 0.936 0.952 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
22. F25D7.2 tag-353 21026 7.699 0.981 0.983 0.969 0.983 0.989 0.983 0.913 0.898
23. F40G9.3 ubc-20 16785 7.699 0.977 0.966 0.977 0.966 0.987 0.942 0.943 0.941 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
24. T21E12.4 dhc-1 20370 7.698 0.969 0.968 0.975 0.968 0.978 0.950 0.940 0.950 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
25. T20G5.1 chc-1 32620 7.692 0.979 0.965 0.962 0.965 0.966 0.974 0.921 0.960 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
26. F39B2.10 dnj-12 35162 7.692 0.978 0.962 0.982 0.962 0.983 0.910 0.942 0.973 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
27. F39B2.2 uev-1 13597 7.691 0.968 0.958 0.970 0.958 0.980 0.972 0.928 0.957 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
28. Y113G7B.23 swsn-1 13766 7.689 0.972 0.977 0.978 0.977 0.974 0.926 0.925 0.960 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
29. F39H11.5 pbs-7 13631 7.688 0.970 0.971 0.961 0.971 0.985 0.939 0.943 0.948 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
30. F26E4.1 sur-6 16191 7.687 0.955 0.986 0.950 0.986 0.982 0.923 0.937 0.968 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
31. F33D11.11 vpr-1 18001 7.684 0.958 0.978 0.959 0.978 0.982 0.945 0.916 0.968 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
32. F08F8.3 kap-1 31437 7.683 0.991 0.980 0.980 0.980 0.962 0.930 0.908 0.952 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
33. Y106G6E.6 csnk-1 11517 7.683 0.970 0.976 0.969 0.976 0.956 0.946 0.933 0.957 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
34. R05F9.10 sgt-1 35541 7.68 0.977 0.958 0.959 0.958 0.974 0.983 0.917 0.954 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
35. F36H9.3 dhs-13 21659 7.677 0.978 0.966 0.985 0.966 0.967 0.966 0.921 0.928 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
36. Y57A10A.18 pqn-87 31844 7.677 0.952 0.967 0.988 0.967 0.960 0.972 0.916 0.955 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
37. B0464.5 spk-1 35112 7.673 0.970 0.961 0.975 0.961 0.976 0.959 0.933 0.938 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
38. Y102A5A.1 cand-1 11808 7.67 0.974 0.973 0.981 0.973 0.967 0.934 0.922 0.946 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
39. Y67D8C.5 eel-1 30623 7.67 0.951 0.940 0.979 0.940 0.987 0.962 0.956 0.955 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
40. T01G9.6 kin-10 27360 7.668 0.958 0.953 0.956 0.953 0.983 0.960 0.951 0.954 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
41. R10E12.1 alx-1 10631 7.666 0.974 0.959 0.959 0.959 0.970 0.964 0.933 0.948 Apoptosis-linked gene 2-interacting protein X 1 [Source:UniProtKB/Swiss-Prot;Acc:P34552]
42. ZK652.3 ufm-1 12647 7.664 0.978 0.960 0.961 0.960 0.953 0.966 0.920 0.966 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
43. Y92C3B.2 uaf-1 14981 7.66 0.984 0.980 0.991 0.980 0.968 0.921 0.921 0.915 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
44. F58G11.1 letm-1 13414 7.659 0.977 0.964 0.971 0.964 0.967 0.957 0.904 0.955 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
45. C17H12.1 dyci-1 9858 7.659 0.969 0.987 0.977 0.987 0.969 0.970 0.941 0.859 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
46. T24C4.6 zer-1 16051 7.656 0.929 0.975 0.929 0.975 0.969 0.963 0.951 0.965 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
47. B0205.7 kin-3 29775 7.653 0.975 0.945 0.954 0.945 0.984 0.955 0.937 0.958 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
48. Y62E10A.10 emc-3 8138 7.652 0.969 0.986 0.945 0.986 0.965 0.949 0.913 0.939 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_502575]
49. C46C2.1 wnk-1 15184 7.652 0.949 0.979 0.972 0.979 0.949 0.961 0.929 0.934 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
50. R144.4 wip-1 14168 7.652 0.963 0.977 0.969 0.977 0.977 0.963 0.886 0.940 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
51. Y54E10A.3 txl-1 5426 7.648 0.974 0.982 0.951 0.982 0.953 0.929 0.939 0.938 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
52. C02F5.9 pbs-6 20120 7.648 0.979 0.973 0.961 0.973 0.978 0.934 0.921 0.929 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
53. B0286.4 ntl-2 14207 7.648 0.951 0.984 0.930 0.984 0.964 0.960 0.967 0.908 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
54. Y77E11A.13 npp-20 5777 7.647 0.983 0.968 0.971 0.968 0.961 0.952 0.894 0.950 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
55. K10C3.2 ensa-1 19836 7.647 0.972 0.976 0.954 0.976 0.970 0.920 0.927 0.952 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
56. C30C11.2 rpn-3 14437 7.646 0.979 0.978 0.956 0.978 0.973 0.921 0.931 0.930 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
57. Y110A7A.14 pas-3 6831 7.645 0.983 0.969 0.940 0.969 0.973 0.940 0.930 0.941 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
58. K02B2.3 mcu-1 20448 7.644 0.979 0.979 0.979 0.979 0.959 0.935 0.909 0.925 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
59. T23H2.5 rab-10 31382 7.643 0.985 0.981 0.967 0.981 0.970 0.964 0.904 0.891 RAB family [Source:RefSeq peptide;Acc:NP_491857]
60. T20F5.2 pbs-4 8985 7.641 0.978 0.973 0.959 0.973 0.966 0.924 0.923 0.945 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
61. F39B2.11 mtx-1 8526 7.641 0.981 0.983 0.961 0.983 0.975 0.934 0.888 0.936 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
62. C16C10.7 rnf-5 7067 7.64 0.966 0.966 0.980 0.966 0.961 0.963 0.914 0.924 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]
63. T06D8.8 rpn-9 11282 7.639 0.972 0.971 0.948 0.971 0.973 0.925 0.941 0.938 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
64. K10B2.1 lin-23 15896 7.638 0.953 0.981 0.949 0.981 0.982 0.935 0.919 0.938 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
65. DY3.2 lmn-1 22449 7.638 0.984 0.989 0.975 0.989 0.958 0.912 0.904 0.927 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
66. ZC262.3 iglr-2 6268 7.637 0.968 0.973 0.944 0.973 0.968 0.945 0.917 0.949 Immunoglobulin domain and leucine-rich repeat-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34595]
67. F29F11.6 gsp-1 27907 7.635 0.984 0.959 0.963 0.959 0.971 0.967 0.916 0.916 Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
68. T12E12.4 drp-1 7694 7.635 0.978 0.984 0.978 0.984 0.963 0.933 0.884 0.931 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
69. F37C12.7 acs-4 25192 7.631 0.981 0.968 0.981 0.968 0.963 0.955 0.890 0.925 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_498568]
70. Y54E10A.9 vbh-1 28746 7.629 0.977 0.969 0.973 0.969 0.980 0.905 0.902 0.954 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
71. C36B1.4 pas-4 13140 7.629 0.973 0.975 0.980 0.975 0.982 0.920 0.930 0.894 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
72. Y32F6A.3 pap-1 11972 7.628 0.955 0.981 0.966 0.981 0.964 0.949 0.908 0.924 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
73. R05D11.3 ran-4 15494 7.627 0.987 0.980 0.968 0.980 0.949 0.918 0.875 0.970 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
74. C56C10.3 vps-32.1 24107 7.626 0.982 0.977 0.972 0.977 0.958 0.907 0.903 0.950 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
75. C34E10.1 gop-3 11393 7.619 0.944 0.961 0.966 0.961 0.958 0.942 0.926 0.961 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
76. Y53C12A.4 mop-25.2 7481 7.619 0.973 0.985 0.966 0.985 0.949 0.922 0.905 0.934 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
77. H06H21.6 ubxn-6 9202 7.619 0.971 0.979 0.967 0.979 0.970 0.948 0.909 0.896 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
78. F58G11.2 rde-12 6935 7.618 0.966 0.973 0.964 0.973 0.961 0.918 0.913 0.950 DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
79. C47E12.5 uba-1 36184 7.618 0.974 0.974 0.955 0.974 0.969 0.951 0.878 0.943 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
80. CD4.6 pas-6 18332 7.617 0.983 0.973 0.930 0.973 0.986 0.928 0.924 0.920 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
81. ZK370.5 pdhk-2 9358 7.617 0.977 0.985 0.968 0.985 0.952 0.944 0.854 0.952 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
82. Y48A6B.13 spat-2 21773 7.616 0.966 0.951 0.951 0.951 0.956 0.936 0.933 0.972 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
83. Y79H2A.6 arx-3 17398 7.615 0.979 0.973 0.975 0.973 0.956 0.934 0.879 0.946 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
84. B0261.2 let-363 8628 7.611 0.972 0.974 0.980 0.974 0.954 0.911 0.914 0.932 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
85. Y18D10A.20 pfn-1 33871 7.609 0.952 0.974 0.937 0.974 0.977 0.960 0.940 0.895 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
86. Y46G5A.12 vps-2 5685 7.607 0.979 0.955 0.940 0.955 0.979 0.954 0.919 0.926 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
87. T27E9.7 abcf-2 40273 7.607 0.955 0.919 0.973 0.919 0.981 0.965 0.946 0.949 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
88. T04D1.3 unc-57 12126 7.606 0.961 0.978 0.971 0.978 0.969 0.920 0.876 0.953 Endophilin [Source:UniProtKB/TrEMBL;Acc:Q6TM46]
89. T05H10.5 ufd-2 30044 7.605 0.974 0.962 0.956 0.962 0.969 0.965 0.878 0.939 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
90. ZK637.3 lnkn-1 16095 7.604 0.977 0.979 0.963 0.979 0.939 0.940 0.866 0.961 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
91. C39E9.14 dli-1 5650 7.603 0.958 0.969 0.983 0.969 0.945 0.942 0.891 0.946 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
92. F10D11.1 sod-2 7480 7.603 0.969 0.976 0.950 0.976 0.955 0.937 0.891 0.949 Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P31161]
93. C13B4.2 usp-14 9000 7.602 0.971 0.985 0.946 0.985 0.964 0.896 0.907 0.948 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
94. B0035.14 dnj-1 5412 7.601 0.978 0.955 0.947 0.955 0.979 0.931 0.943 0.913 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001263785]
95. F44B9.8 F44B9.8 1978 7.601 0.957 0.970 0.956 0.970 0.964 0.938 0.909 0.937 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
96. H06H21.3 eif-1.A 40990 7.601 0.958 0.954 0.954 0.954 0.971 0.941 0.950 0.919 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
97. Y104H12BR.1 plst-1 9556 7.601 0.969 0.959 0.953 0.959 0.967 0.938 0.886 0.970 PLaSTin (actin bundling protein) homolog [Source:RefSeq peptide;Acc:NP_001294438]
98. C47G2.5 saps-1 7555 7.601 0.949 0.974 0.923 0.974 0.975 0.930 0.927 0.949 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
99. K01G5.9 K01G5.9 2321 7.6 0.978 0.970 0.938 0.970 0.956 0.953 0.932 0.903
100. F25G6.9 F25G6.9 3071 7.6 0.971 0.933 0.989 0.933 0.970 0.946 0.903 0.955

There are 3112 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA