C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F41E6.9

Gene ID Gene Name Reads Transcripts Annotation
F41E6.9 vps-60 4469 F41E6.9 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]

Genes with expression patterns similar to F41E6.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F41E6.9 vps-60 4469 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
2. T12D8.6 mlc-5 19567 7.744 0.972 0.974 0.983 0.974 0.960 0.961 0.966 0.954 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
3. F38H4.9 let-92 25368 7.715 0.972 0.973 0.982 0.973 0.969 0.936 0.959 0.951 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
4. K10C3.2 ensa-1 19836 7.695 0.955 0.959 0.967 0.959 0.970 0.965 0.953 0.967 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
5. T06D8.8 rpn-9 11282 7.671 0.967 0.964 0.963 0.964 0.981 0.959 0.958 0.915 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
6. R144.4 wip-1 14168 7.669 0.955 0.954 0.981 0.954 0.960 0.960 0.939 0.966 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
7. T12E12.4 drp-1 7694 7.667 0.966 0.965 0.979 0.965 0.963 0.974 0.938 0.917 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
8. R05D11.3 ran-4 15494 7.662 0.967 0.964 0.967 0.964 0.948 0.961 0.926 0.965 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
9. Y113G7B.23 swsn-1 13766 7.66 0.948 0.943 0.977 0.943 0.975 0.972 0.946 0.956 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
10. F39B2.11 mtx-1 8526 7.659 0.968 0.958 0.979 0.958 0.965 0.980 0.944 0.907 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
11. Y56A3A.20 ccf-1 18463 7.657 0.974 0.952 0.972 0.952 0.965 0.949 0.938 0.955 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
12. Y102A5A.1 cand-1 11808 7.656 0.960 0.944 0.973 0.944 0.977 0.970 0.948 0.940 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
13. ZK20.3 rad-23 35070 7.654 0.973 0.958 0.989 0.958 0.957 0.942 0.951 0.926
14. F23B12.6 fntb-1 4392 7.651 0.957 0.958 0.953 0.958 0.975 0.975 0.913 0.962 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
15. F08F8.3 kap-1 31437 7.643 0.973 0.956 0.983 0.956 0.950 0.949 0.931 0.945 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
16. H06H21.6 ubxn-6 9202 7.638 0.968 0.968 0.976 0.968 0.970 0.961 0.939 0.888 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
17. K08D12.1 pbs-1 21677 7.635 0.966 0.945 0.971 0.945 0.972 0.947 0.955 0.934 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
18. F33D11.11 vpr-1 18001 7.634 0.936 0.954 0.953 0.954 0.973 0.982 0.938 0.944 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
19. F39B2.10 dnj-12 35162 7.633 0.937 0.933 0.975 0.933 0.967 0.961 0.966 0.961 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
20. Y38A8.2 pbs-3 18117 7.63 0.976 0.933 0.978 0.933 0.967 0.973 0.957 0.913 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
21. D1022.1 ubc-6 9722 7.629 0.977 0.963 0.965 0.963 0.944 0.951 0.909 0.957 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
22. R02D3.5 fnta-1 5258 7.621 0.965 0.962 0.973 0.962 0.965 0.958 0.926 0.910 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
23. K11D12.2 pqn-51 15951 7.62 0.972 0.968 0.983 0.968 0.946 0.956 0.896 0.931 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
24. Y53C12A.4 mop-25.2 7481 7.619 0.960 0.969 0.960 0.969 0.936 0.952 0.936 0.937 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
25. F40G9.3 ubc-20 16785 7.619 0.935 0.940 0.966 0.940 0.964 0.981 0.948 0.945 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
26. M7.1 let-70 85699 7.613 0.934 0.946 0.968 0.946 0.962 0.940 0.959 0.958 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
27. C09G12.9 tsg-101 9451 7.607 0.983 0.928 0.963 0.928 0.970 0.952 0.965 0.918 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
28. R01B10.5 jamp-1 10072 7.607 0.945 0.978 0.971 0.978 0.970 0.961 0.940 0.864 JAMP (JNK1-Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_504568]
29. T10C6.4 srx-44 8454 7.607 0.975 0.940 0.966 0.940 0.977 0.946 0.938 0.925 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
30. F25G6.9 F25G6.9 3071 7.607 0.960 0.914 0.993 0.914 0.972 0.957 0.964 0.933
31. F39H11.5 pbs-7 13631 7.606 0.968 0.936 0.976 0.936 0.960 0.942 0.972 0.916 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
32. C16C10.1 C16C10.1 4030 7.604 0.952 0.961 0.940 0.961 0.955 0.951 0.921 0.963 Uncharacterized mitochondrial carrier C16C10.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09461]
33. ZK616.6 perm-3 16186 7.601 0.950 0.950 0.966 0.950 0.953 0.951 0.947 0.934 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
34. B0035.6 B0035.6 7327 7.599 0.977 0.939 0.939 0.939 0.958 0.961 0.946 0.940
35. Y110A7A.14 pas-3 6831 7.597 0.967 0.936 0.957 0.936 0.947 0.966 0.946 0.942 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
36. C17E4.5 pabp-2 12843 7.595 0.968 0.957 0.980 0.957 0.943 0.965 0.945 0.880 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
37. Y62E10A.10 emc-3 8138 7.593 0.963 0.975 0.962 0.975 0.968 0.933 0.947 0.870 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_502575]
38. R07G3.5 pgam-5 11646 7.588 0.947 0.957 0.977 0.957 0.944 0.930 0.932 0.944 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
39. F36D4.3 hum-2 16493 7.587 0.967 0.956 0.960 0.956 0.969 0.947 0.943 0.889 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
40. F25B3.1 ehbp-1 6409 7.586 0.950 0.969 0.974 0.969 0.954 0.923 0.915 0.932 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
41. F25D1.1 ppm-1 16992 7.585 0.977 0.950 0.985 0.950 0.973 0.959 0.950 0.841 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
42. D1081.9 D1081.9 3792 7.585 0.913 0.966 0.963 0.966 0.967 0.929 0.948 0.933
43. C36B1.8 gls-1 8617 7.584 0.950 0.954 0.958 0.954 0.961 0.944 0.916 0.947 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
44. T05H4.6 erfa-1 12542 7.584 0.951 0.926 0.951 0.926 0.969 0.965 0.936 0.960 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
45. D1014.3 snap-1 16776 7.583 0.966 0.945 0.978 0.945 0.959 0.936 0.948 0.906 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
46. D2089.1 rsp-7 11057 7.579 0.964 0.949 0.975 0.949 0.969 0.940 0.916 0.917 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
47. F26E4.1 sur-6 16191 7.579 0.928 0.964 0.955 0.964 0.960 0.929 0.948 0.931 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
48. F44B9.8 F44B9.8 1978 7.579 0.955 0.949 0.965 0.949 0.977 0.953 0.944 0.887 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
49. F54C8.5 rheb-1 6358 7.577 0.982 0.948 0.965 0.948 0.949 0.961 0.893 0.931 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
50. F39B2.2 uev-1 13597 7.577 0.949 0.907 0.973 0.907 0.964 0.957 0.961 0.959 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
51. ZK858.1 gld-4 14162 7.576 0.971 0.932 0.965 0.932 0.978 0.961 0.895 0.942 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
52. Y73B6BL.6 sqd-1 41708 7.576 0.932 0.935 0.947 0.935 0.970 0.967 0.949 0.941 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
53. C33H5.17 zgpa-1 7873 7.576 0.962 0.959 0.961 0.959 0.976 0.959 0.862 0.938 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
54. C15H11.4 dhs-22 21674 7.576 0.979 0.931 0.970 0.931 0.956 0.940 0.926 0.943 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
55. C39E9.14 dli-1 5650 7.574 0.957 0.937 0.968 0.937 0.956 0.942 0.924 0.953 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
56. CD4.6 pas-6 18332 7.572 0.961 0.948 0.959 0.948 0.958 0.938 0.956 0.904 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
57. W02B12.9 mfn-1 7309 7.572 0.946 0.959 0.946 0.959 0.943 0.921 0.941 0.957 Mitoferrin [Source:UniProtKB/Swiss-Prot;Acc:Q23125]
58. Y77E11A.13 npp-20 5777 7.571 0.976 0.942 0.972 0.942 0.954 0.945 0.904 0.936 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
59. Y54E10A.3 txl-1 5426 7.571 0.953 0.978 0.962 0.978 0.955 0.921 0.946 0.878 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
60. K08E3.4 dbn-1 7063 7.571 0.945 0.949 0.970 0.949 0.967 0.962 0.907 0.922 DreBriN 1/DreBriN-like (where Drebrin is from Developmentally REgulated BRaIN protein) family homolog [Source:RefSeq peptide;Acc:NP_499840]
61. F41E6.4 smk-1 22394 7.569 0.932 0.949 0.978 0.949 0.971 0.936 0.944 0.910 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
62. Y54E10A.9 vbh-1 28746 7.568 0.943 0.934 0.967 0.934 0.964 0.919 0.945 0.962 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
63. C36B1.4 pas-4 13140 7.567 0.970 0.946 0.969 0.946 0.971 0.953 0.939 0.873 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
64. T01G9.4 npp-2 5361 7.567 0.929 0.972 0.980 0.972 0.970 0.885 0.954 0.905 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
65. F10D11.1 sod-2 7480 7.567 0.947 0.949 0.959 0.949 0.951 0.958 0.912 0.942 Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P31161]
66. C25A1.5 C25A1.5 9135 7.566 0.941 0.964 0.976 0.964 0.959 0.939 0.927 0.896
67. Y47G6A.20 rnp-6 5542 7.565 0.943 0.966 0.963 0.966 0.943 0.941 0.924 0.919 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
68. F26E4.11 hrdl-1 14721 7.564 0.901 0.972 0.955 0.972 0.974 0.966 0.929 0.895 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
69. R07G3.1 cdc-42 35737 7.563 0.978 0.966 0.986 0.966 0.961 0.893 0.889 0.924 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
70. T05F1.6 hsr-9 13312 7.563 0.955 0.942 0.989 0.942 0.956 0.922 0.936 0.921
71. C47G2.5 saps-1 7555 7.562 0.944 0.956 0.948 0.956 0.974 0.937 0.937 0.910 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
72. CD4.4 vps-37 4265 7.562 0.965 0.921 0.956 0.921 0.971 0.941 0.920 0.967 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_504474]
73. C18D11.4 rsp-8 18308 7.562 0.949 0.911 0.961 0.911 0.981 0.953 0.931 0.965 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
74. Y111B2A.18 rsp-3 43731 7.562 0.958 0.944 0.973 0.944 0.952 0.906 0.941 0.944 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
75. Y92C3B.2 uaf-1 14981 7.562 0.970 0.958 0.977 0.958 0.941 0.941 0.931 0.886 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
76. F59B2.7 rab-6.1 10749 7.56 0.984 0.922 0.987 0.922 0.973 0.916 0.937 0.919 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
77. C09G4.3 cks-1 17852 7.559 0.965 0.944 0.965 0.944 0.964 0.945 0.949 0.883 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
78. C13B4.2 usp-14 9000 7.559 0.978 0.964 0.967 0.964 0.967 0.881 0.923 0.915 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
79. C34E10.1 gop-3 11393 7.559 0.932 0.939 0.972 0.939 0.953 0.961 0.926 0.937 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
80. C47B2.4 pbs-2 19805 7.559 0.958 0.922 0.969 0.922 0.965 0.967 0.951 0.905 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
81. M106.4 gmps-1 12232 7.558 0.940 0.940 0.967 0.940 0.970 0.955 0.918 0.928 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
82. B0261.2 let-363 8628 7.556 0.966 0.963 0.963 0.963 0.936 0.948 0.941 0.876 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
83. K01G5.9 K01G5.9 2321 7.556 0.968 0.956 0.956 0.956 0.948 0.978 0.949 0.845
84. T04A8.10 sel-13 3109 7.556 0.951 0.949 0.971 0.949 0.946 0.956 0.893 0.941 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
85. K07C5.8 cash-1 10523 7.555 0.979 0.948 0.980 0.948 0.973 0.932 0.960 0.835 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
86. Y32F6A.3 pap-1 11972 7.554 0.966 0.946 0.980 0.946 0.941 0.950 0.932 0.893 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
87. F38H4.7 tag-30 4315 7.551 0.936 0.935 0.957 0.935 0.972 0.953 0.951 0.912
88. T04A8.14 emb-5 11746 7.551 0.934 0.953 0.970 0.953 0.947 0.963 0.917 0.914 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
89. Y55D9A.1 efa-6 10012 7.55 0.925 0.957 0.984 0.957 0.960 0.930 0.936 0.901 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
90. F57B10.11 bag-1 3395 7.549 0.957 0.948 0.954 0.948 0.930 0.934 0.939 0.939 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
91. T21D12.3 pqbp-1.1 5755 7.549 0.956 0.948 0.973 0.948 0.968 0.926 0.918 0.912 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
92. F58G11.1 letm-1 13414 7.549 0.956 0.927 0.965 0.927 0.934 0.961 0.930 0.949 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
93. T10F2.4 prp-19 11298 7.548 0.972 0.942 0.981 0.942 0.958 0.924 0.919 0.910 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
94. T21E12.4 dhc-1 20370 7.548 0.952 0.934 0.977 0.934 0.967 0.936 0.925 0.923 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
95. Y56A3A.1 ntl-3 10450 7.548 0.946 0.958 0.938 0.958 0.960 0.912 0.967 0.909 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
96. T20F5.2 pbs-4 8985 7.547 0.975 0.947 0.966 0.947 0.940 0.938 0.940 0.894 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
97. F25H2.6 F25H2.6 4807 7.546 0.969 0.961 0.961 0.961 0.974 0.966 0.900 0.854
98. F33D4.7 emc-6 6534 7.544 0.959 0.936 0.984 0.936 0.929 0.937 0.906 0.957 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
99. ZK896.9 nstp-5 7851 7.544 0.945 0.919 0.951 0.919 0.975 0.926 0.943 0.966 Nucleotide Sugar TransPorter family [Source:RefSeq peptide;Acc:NP_001255679]
100. K02F2.1 dpf-3 11465 7.543 0.958 0.946 0.980 0.946 0.972 0.935 0.937 0.869 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]

There are 2511 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA