C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for ZK1127.9

Gene ID Gene Name Reads Transcripts Annotation
ZK1127.9 tcer-1 2225 ZK1127.9a, ZK1127.9b, ZK1127.9c.1, ZK1127.9c.2, ZK1127.9d, ZK1127.9e.1, ZK1127.9e.2 TransCription Elongation Regulator homolog [Source:RefSeq peptide;Acc:NP_495443]

Genes with expression patterns similar to ZK1127.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK1127.9 tcer-1 2225 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TransCription Elongation Regulator homolog [Source:RefSeq peptide;Acc:NP_495443]
2. F36F2.3 rbpl-1 15376 7.379 0.865 0.945 0.932 0.945 0.936 0.960 0.887 0.909 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
3. M106.1 mix-1 7950 7.365 0.893 0.944 0.951 0.944 0.958 0.904 0.882 0.889 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
4. K02F2.1 dpf-3 11465 7.334 0.807 0.960 0.920 0.960 0.928 0.976 0.859 0.924 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
5. F19F10.11 F19F10.11 2683 7.327 0.873 0.936 0.953 0.936 0.934 0.886 0.889 0.920
6. F41E6.4 smk-1 22394 7.324 0.874 0.937 0.926 0.937 0.952 0.956 0.874 0.868 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
7. K03H1.2 mog-1 4057 7.301 0.893 0.948 0.935 0.948 0.883 0.960 0.830 0.904 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
8. F52C9.8 pqe-1 7546 7.297 0.866 0.959 0.910 0.959 0.942 0.962 0.856 0.843 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
9. C05C8.4 gei-6 6026 7.261 0.827 0.954 0.930 0.954 0.924 0.948 0.837 0.887 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
10. M01E5.5 top-1 25458 7.261 0.902 0.952 0.920 0.952 0.936 0.938 0.899 0.762 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
11. T27C4.4 lin-40 16565 7.26 0.868 0.931 0.921 0.931 0.950 0.877 0.884 0.898
12. H38K22.1 evl-14 3704 7.256 0.881 0.933 0.928 0.933 0.895 0.966 0.859 0.861
13. C17E4.10 C17E4.10 7034 7.253 0.847 0.922 0.932 0.922 0.945 0.962 0.822 0.901
14. R151.8 R151.8 2527 7.248 0.870 0.944 0.867 0.944 0.927 0.956 0.865 0.875
15. D2089.1 rsp-7 11057 7.246 0.854 0.948 0.921 0.948 0.947 0.975 0.882 0.771 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
16. F16D3.2 rsd-6 8211 7.242 0.795 0.962 0.910 0.962 0.945 0.939 0.883 0.846
17. Y81G3A.3 gcn-2 5831 7.241 0.787 0.940 0.901 0.940 0.931 0.972 0.899 0.871 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
18. C43E11.3 met-1 7581 7.227 0.809 0.959 0.905 0.959 0.921 0.964 0.836 0.874 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
19. ZC395.8 ztf-8 5521 7.215 0.828 0.938 0.921 0.938 0.955 0.926 0.787 0.922 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
20. F18E2.3 scc-3 13464 7.214 0.822 0.939 0.931 0.939 0.950 0.930 0.852 0.851 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
21. T05E8.3 let-355 8169 7.209 0.847 0.951 0.925 0.951 0.897 0.957 0.833 0.848
22. T07D4.3 rha-1 5898 7.205 0.836 0.950 0.926 0.950 0.925 0.957 0.852 0.809 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
23. ZK1128.5 ham-3 2917 7.201 0.756 0.965 0.878 0.965 0.947 0.928 0.939 0.823
24. ZK973.2 cec-10 7108 7.201 0.870 0.966 0.877 0.966 0.881 0.938 0.803 0.900 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
25. C10C6.6 catp-8 8079 7.196 0.821 0.958 0.921 0.958 0.947 0.915 0.861 0.815 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
26. F28D9.1 rsr-1 4282 7.195 0.877 0.942 0.899 0.942 0.941 0.964 0.805 0.825 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
27. C50C3.6 prp-8 19582 7.195 0.785 0.964 0.906 0.964 0.938 0.954 0.814 0.870 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
28. F32A5.1 ada-2 8343 7.19 0.855 0.925 0.906 0.925 0.919 0.950 0.841 0.869 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
29. Y56A3A.1 ntl-3 10450 7.189 0.792 0.951 0.898 0.951 0.945 0.950 0.788 0.914 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
30. T05H10.2 apn-1 5628 7.181 0.804 0.949 0.923 0.949 0.963 0.918 0.775 0.900 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
31. C36B1.8 gls-1 8617 7.177 0.805 0.939 0.926 0.939 0.917 0.951 0.879 0.821 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
32. F12F6.3 rib-1 10524 7.176 0.813 0.950 0.921 0.950 0.922 0.887 0.879 0.854 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
33. T10F2.3 ulp-1 8351 7.175 0.828 0.936 0.895 0.936 0.964 0.920 0.841 0.855 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
34. Y67H2A.6 csn-6 3098 7.174 0.763 0.948 0.897 0.948 0.938 0.962 0.846 0.872 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
35. F35G12.8 smc-4 6202 7.171 0.820 0.951 0.898 0.951 0.914 0.949 0.841 0.847 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
36. ZK1127.12 ZK1127.12 2029 7.17 0.827 0.913 0.874 0.913 0.909 0.973 0.836 0.925
37. M03C11.7 prp-3 2952 7.169 0.836 0.915 0.890 0.915 0.919 0.958 0.861 0.875 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_499300]
38. Y48G8AL.6 smg-2 12561 7.167 0.814 0.920 0.911 0.920 0.936 0.976 0.815 0.875 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
39. F43G9.13 F43G9.13 4822 7.166 0.850 0.953 0.855 0.953 0.940 0.940 0.839 0.836
40. F37E3.1 ncbp-1 5649 7.157 0.824 0.954 0.924 0.954 0.902 0.956 0.863 0.780 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
41. F56A8.6 cpf-2 2730 7.154 0.812 0.952 0.915 0.952 0.902 0.941 0.843 0.837 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
42. T24F1.2 samp-1 8422 7.152 0.790 0.914 0.907 0.914 0.945 0.972 0.813 0.897 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
43. T05F1.6 hsr-9 13312 7.152 0.828 0.963 0.916 0.963 0.924 0.917 0.795 0.846
44. C25H3.6 mdt-26 9423 7.151 0.808 0.938 0.926 0.938 0.957 0.966 0.831 0.787 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]
45. C50A2.2 cec-2 4169 7.15 0.800 0.959 0.924 0.959 0.936 0.889 0.798 0.885 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
46. Y41E3.9 fcd-2 2268 7.145 0.843 0.923 0.909 0.923 0.951 0.884 0.893 0.819 human FANCD2 (Fanconi's anemia defect) ortholog [Source:RefSeq peptide;Acc:NP_001255848]
47. C03D6.4 npp-14 4889 7.145 0.828 0.946 0.874 0.946 0.932 0.966 0.872 0.781 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
48. C29E4.2 kle-2 5527 7.145 0.773 0.943 0.916 0.943 0.931 0.951 0.853 0.835 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
49. C08B11.6 arp-6 4646 7.144 0.771 0.945 0.907 0.945 0.952 0.939 0.828 0.857 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
50. T23D8.4 eif-3.C 15343 7.143 0.812 0.923 0.897 0.923 0.943 0.970 0.830 0.845 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
51. D2005.5 drh-3 2293 7.143 0.782 0.923 0.927 0.923 0.917 0.955 0.802 0.914 Dicer Related Helicase [Source:RefSeq peptide;Acc:NP_492161]
52. Y47G6A.8 crn-1 3494 7.142 0.855 0.961 0.909 0.961 0.901 0.920 0.816 0.819 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
53. C18G1.5 hil-4 21692 7.14 0.812 0.970 0.919 0.970 0.897 0.926 0.821 0.825 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
54. F48E8.6 disl-2 8774 7.139 0.770 0.927 0.908 0.927 0.935 0.951 0.840 0.881 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
55. Y39A1B.3 dpy-28 4459 7.139 0.798 0.963 0.909 0.963 0.940 0.955 0.895 0.716 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
56. F58G11.1 letm-1 13414 7.137 0.795 0.962 0.891 0.962 0.916 0.923 0.838 0.850 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
57. K07C5.8 cash-1 10523 7.136 0.799 0.950 0.906 0.950 0.935 0.909 0.840 0.847 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
58. Y61A9LA.8 sut-2 11388 7.131 0.823 0.936 0.896 0.936 0.944 0.964 0.830 0.802 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
59. ZK686.4 snu-23 9040 7.131 0.815 0.953 0.913 0.953 0.911 0.926 0.818 0.842 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
60. C55A6.9 pafo-1 2328 7.13 0.818 0.944 0.918 0.944 0.930 0.961 0.802 0.813 RNA polymerase II-associated factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90783]
61. Y17G7B.17 Y17G7B.17 11197 7.13 0.757 0.938 0.911 0.938 0.899 0.952 0.890 0.845
62. F32H2.4 thoc-3 3861 7.128 0.770 0.951 0.933 0.951 0.934 0.920 0.815 0.854 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
63. T27F2.1 skp-1 3532 7.127 0.807 0.951 0.890 0.951 0.906 0.950 0.789 0.883 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
64. F58B6.3 par-2 3914 7.125 0.782 0.948 0.899 0.948 0.942 0.962 0.808 0.836
65. Y105E8A.17 ekl-4 4732 7.122 0.821 0.952 0.904 0.952 0.920 0.932 0.826 0.815
66. ZK858.1 gld-4 14162 7.122 0.772 0.921 0.908 0.921 0.948 0.955 0.849 0.848 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
67. Y18D10A.1 attf-6 6942 7.121 0.893 0.952 0.896 0.952 0.871 0.896 0.756 0.905 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
68. Y111B2A.14 pqn-80 6445 7.12 0.821 0.880 0.943 0.880 0.916 0.971 0.847 0.862 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001255178]
69. K06H7.4 grp-1 4601 7.119 0.787 0.947 0.907 0.947 0.907 0.957 0.825 0.842 GTP exchange factor for ARFs 1 [Source:UniProtKB/Swiss-Prot;Acc:P34512]
70. Y53H1A.5 nfya-2 4166 7.118 0.769 0.944 0.911 0.944 0.929 0.953 0.811 0.857 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
71. C27F2.10 C27F2.10 4214 7.118 0.799 0.929 0.902 0.929 0.954 0.936 0.848 0.821 PCI domain-containing protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95QU0]
72. T04A8.14 emb-5 11746 7.118 0.815 0.961 0.915 0.961 0.906 0.934 0.823 0.803 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
73. Y111B2A.11 epc-1 8915 7.116 0.777 0.949 0.906 0.949 0.954 0.954 0.793 0.834 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
74. F56D1.4 clr-1 8615 7.109 0.755 0.951 0.916 0.951 0.931 0.970 0.781 0.854 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
75. F44A2.1 tag-153 16535 7.106 0.807 0.952 0.921 0.952 0.930 0.907 0.810 0.827
76. B0334.5 B0334.5 4713 7.102 0.749 0.950 0.901 0.950 0.917 0.949 0.834 0.852
77. Y47G6A.20 rnp-6 5542 7.101 0.781 0.946 0.886 0.946 0.922 0.959 0.786 0.875 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
78. F44B9.4 cit-1.1 4631 7.1 0.750 0.952 0.925 0.952 0.930 0.954 0.737 0.900 Cyclin-T1.1 [Source:UniProtKB/Swiss-Prot;Acc:P34425]
79. T12D8.2 drr-2 16208 7.098 0.817 0.940 0.892 0.940 0.915 0.966 0.826 0.802 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
80. T10F2.4 prp-19 11298 7.097 0.754 0.952 0.904 0.952 0.918 0.956 0.763 0.898 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
81. EEED8.7 rsp-4 13043 7.096 0.808 0.950 0.912 0.950 0.903 0.955 0.793 0.825 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
82. C26E6.5 fsn-1 6615 7.096 0.761 0.951 0.934 0.951 0.908 0.945 0.822 0.824 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
83. C16A3.7 nfx-1 4680 7.092 0.851 0.952 0.900 0.952 0.912 0.923 0.786 0.816 Transcriptional repressor NF-X1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18034]
84. C17H12.1 dyci-1 9858 7.09 0.793 0.950 0.899 0.950 0.940 0.900 0.798 0.860 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
85. H27M09.1 sacy-1 3342 7.089 0.847 0.944 0.933 0.944 0.861 0.950 0.845 0.765 Suppressor of ACY-4 sterility [Source:RefSeq peptide;Acc:NP_491962]
86. H06O01.2 chd-1 7853 7.088 0.848 0.951 0.916 0.951 0.895 0.957 0.833 0.737 Chromodomain and Helicase Domain protein [Source:RefSeq peptide;Acc:NP_491994]
87. ZC404.9 gck-2 8382 7.088 0.806 0.963 0.913 0.963 0.934 0.916 0.860 0.733 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
88. Y6D11A.1 exos-4.2 1983 7.088 0.795 0.913 0.891 0.913 0.916 0.965 0.850 0.845 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_497279]
89. Y32F6A.3 pap-1 11972 7.087 0.827 0.951 0.919 0.951 0.908 0.905 0.813 0.813 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
90. Y67D8C.5 eel-1 30623 7.086 0.789 0.931 0.905 0.931 0.952 0.900 0.778 0.900 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
91. Y119C1B.8 bet-1 5991 7.083 0.783 0.907 0.899 0.907 0.933 0.951 0.805 0.898 Bromodomain-containing protein bet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y80]
92. F25B5.2 nop-1 4127 7.082 0.764 0.963 0.914 0.963 0.912 0.925 0.867 0.774 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
93. C09G12.9 tsg-101 9451 7.081 0.721 0.955 0.920 0.955 0.949 0.911 0.807 0.863 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
94. K08D12.1 pbs-1 21677 7.081 0.757 0.961 0.907 0.961 0.938 0.922 0.796 0.839 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
95. ZK328.2 eftu-2 7040 7.08 0.828 0.950 0.931 0.950 0.832 0.912 0.793 0.884 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
96. R07G3.3 npp-21 3792 7.078 0.824 0.933 0.892 0.933 0.920 0.951 0.807 0.818 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
97. T01G1.3 sec-31 10504 7.078 0.788 0.937 0.907 0.937 0.947 0.956 0.813 0.793 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
98. B0261.2 let-363 8628 7.078 0.791 0.946 0.885 0.946 0.888 0.950 0.858 0.814 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
99. C18D11.4 rsp-8 18308 7.077 0.786 0.949 0.884 0.949 0.945 0.962 0.785 0.817 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
100. F26E4.1 sur-6 16191 7.076 0.808 0.951 0.916 0.951 0.940 0.905 0.732 0.873 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]

There are 617 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA