C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y41E3.9

Gene ID Gene Name Reads Transcripts Annotation
Y41E3.9 fcd-2 2268 Y41E3.9a, Y41E3.9b, Y41E3.9c human FANCD2 (Fanconi's anemia defect) ortholog [Source:RefSeq peptide;Acc:NP_001255848]

Genes with expression patterns similar to Y41E3.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y41E3.9 fcd-2 2268 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 human FANCD2 (Fanconi's anemia defect) ortholog [Source:RefSeq peptide;Acc:NP_001255848]
2. F18E2.3 scc-3 13464 7.707 0.944 0.974 0.978 0.974 0.959 0.962 0.944 0.972 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
3. T13F2.7 sna-2 4771 7.671 0.918 0.980 0.942 0.980 0.980 0.940 0.958 0.973 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
4. M106.1 mix-1 7950 7.656 0.921 0.972 0.963 0.972 0.970 0.940 0.947 0.971 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
5. C17E4.10 C17E4.10 7034 7.652 0.936 0.963 0.982 0.963 0.974 0.945 0.946 0.943
6. Y2H9A.1 mes-4 3566 7.646 0.960 0.968 0.952 0.968 0.967 0.918 0.959 0.954 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
7. T07D4.3 rha-1 5898 7.626 0.910 0.961 0.973 0.961 0.966 0.949 0.949 0.957 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
8. T17E9.1 kin-18 8172 7.617 0.926 0.976 0.981 0.976 0.948 0.930 0.945 0.935 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
9. K04C2.4 brd-1 2439 7.609 0.919 0.957 0.962 0.957 0.980 0.962 0.937 0.935 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
10. K02F2.3 teg-4 3873 7.609 0.952 0.966 0.968 0.966 0.956 0.957 0.907 0.937 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
11. F28D9.1 rsr-1 4282 7.603 0.940 0.965 0.963 0.965 0.967 0.969 0.919 0.915 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
12. F25B5.2 nop-1 4127 7.6 0.943 0.947 0.978 0.947 0.974 0.950 0.951 0.910 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
13. W02D9.1 pri-2 6048 7.593 0.904 0.970 0.972 0.970 0.952 0.947 0.927 0.951 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
14. F36A2.13 ubr-5 9047 7.592 0.943 0.957 0.948 0.957 0.983 0.930 0.958 0.916 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
15. F46F11.10 F46F11.10 968 7.589 0.935 0.949 0.978 0.949 0.943 0.949 0.923 0.963
16. C47D12.1 trr-1 4646 7.589 0.909 0.960 0.964 0.960 0.925 0.965 0.955 0.951 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
17. W01B6.9 ndc-80 4670 7.584 0.920 0.947 0.979 0.947 0.979 0.933 0.923 0.956 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
18. C43E11.1 acin-1 7781 7.583 0.901 0.968 0.956 0.968 0.958 0.945 0.965 0.922 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
19. Y39A1B.3 dpy-28 4459 7.581 0.943 0.941 0.979 0.941 0.975 0.949 0.941 0.912 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
20. C36B1.8 gls-1 8617 7.58 0.928 0.971 0.957 0.971 0.958 0.922 0.961 0.912 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
21. Y55D9A.1 efa-6 10012 7.58 0.944 0.967 0.977 0.967 0.953 0.893 0.954 0.925 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
22. F43G9.10 mfap-1 9205 7.578 0.898 0.947 0.942 0.947 0.962 0.953 0.955 0.974 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
23. F22D6.5 prpf-4 9522 7.577 0.912 0.955 0.948 0.955 0.960 0.947 0.930 0.970 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
24. C24G6.1 syp-2 2843 7.575 0.913 0.952 0.981 0.952 0.962 0.936 0.932 0.947
25. Y53H1A.5 nfya-2 4166 7.574 0.918 0.960 0.969 0.960 0.967 0.932 0.908 0.960 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
26. ZK856.12 hpo-40 7855 7.567 0.892 0.966 0.970 0.966 0.982 0.937 0.895 0.959
27. D2089.1 rsp-7 11057 7.566 0.933 0.972 0.971 0.972 0.949 0.924 0.924 0.921 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
28. F12F6.3 rib-1 10524 7.565 0.951 0.966 0.977 0.966 0.932 0.892 0.930 0.951 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
29. C05C8.4 gei-6 6026 7.564 0.935 0.950 0.959 0.950 0.948 0.929 0.960 0.933 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
30. R06A4.7 mes-2 2612 7.562 0.897 0.967 0.957 0.967 0.951 0.937 0.978 0.908 Histone-lysine N-methyltransferase mes-2 [Source:UniProtKB/Swiss-Prot;Acc:O17514]
31. Y65B4BL.2 deps-1 18277 7.56 0.944 0.961 0.977 0.961 0.950 0.902 0.936 0.929
32. C18G1.5 hil-4 21692 7.56 0.922 0.950 0.973 0.950 0.944 0.950 0.943 0.928 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
33. F35G12.8 smc-4 6202 7.56 0.915 0.973 0.970 0.973 0.960 0.902 0.909 0.958 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
34. ZK1098.8 mut-7 4940 7.559 0.924 0.939 0.983 0.939 0.972 0.922 0.912 0.968 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
35. Y111B2A.14 pqn-80 6445 7.558 0.935 0.946 0.980 0.946 0.931 0.921 0.939 0.960 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001255178]
36. Y81G3A.3 gcn-2 5831 7.558 0.933 0.949 0.949 0.949 0.959 0.944 0.964 0.911 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
37. F52C9.8 pqe-1 7546 7.558 0.938 0.962 0.975 0.962 0.958 0.902 0.944 0.917 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
38. Y73F8A.34 tag-349 7966 7.558 0.934 0.944 0.977 0.944 0.967 0.958 0.899 0.935
39. C29E4.2 kle-2 5527 7.557 0.955 0.953 0.951 0.953 0.957 0.917 0.925 0.946 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
40. T01G9.4 npp-2 5361 7.55 0.896 0.966 0.962 0.966 0.969 0.960 0.888 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
41. F23F1.1 nfyc-1 9983 7.55 0.935 0.960 0.973 0.960 0.934 0.941 0.909 0.938 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
42. F28B3.7 him-1 18274 7.545 0.929 0.965 0.963 0.965 0.958 0.933 0.924 0.908 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
43. R11A8.7 R11A8.7 15531 7.545 0.933 0.969 0.929 0.969 0.943 0.928 0.907 0.967 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
44. T09A5.8 cec-3 5813 7.544 0.878 0.958 0.959 0.958 0.961 0.970 0.912 0.948 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
45. C05C8.6 hpo-9 8263 7.544 0.922 0.980 0.981 0.980 0.972 0.891 0.900 0.918
46. C26E6.5 fsn-1 6615 7.543 0.913 0.957 0.984 0.957 0.965 0.915 0.914 0.938 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
47. T10F2.3 ulp-1 8351 7.543 0.918 0.965 0.971 0.965 0.951 0.907 0.925 0.941 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
48. D1081.9 D1081.9 3792 7.543 0.877 0.965 0.971 0.965 0.982 0.944 0.938 0.901
49. T01C3.1 cdt-2 5193 7.542 0.909 0.920 0.963 0.920 0.982 0.959 0.953 0.936 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
50. Y61A9LA.8 sut-2 11388 7.542 0.911 0.957 0.957 0.957 0.972 0.932 0.942 0.914 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
51. F56D1.7 daz-1 23684 7.541 0.876 0.957 0.969 0.957 0.963 0.955 0.906 0.958 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
52. D1007.7 nrd-1 6738 7.54 0.916 0.978 0.976 0.978 0.921 0.904 0.939 0.928 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
53. T06D10.2 chaf-1 8121 7.54 0.903 0.960 0.956 0.960 0.943 0.931 0.943 0.944 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
54. F33H2.1 dog-1 2417 7.539 0.907 0.934 0.936 0.934 0.975 0.970 0.947 0.936 Deletions Of G-rich DNA [Source:RefSeq peptide;Acc:NP_493618]
55. F37E3.1 ncbp-1 5649 7.539 0.925 0.975 0.976 0.975 0.952 0.923 0.953 0.860 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
56. F19F10.12 F19F10.12 2474 7.539 0.887 0.937 0.970 0.937 0.952 0.953 0.953 0.950
57. E01A2.4 let-504 9788 7.538 0.890 0.974 0.948 0.974 0.970 0.940 0.886 0.956
58. Y43H11AL.3 pqn-85 2924 7.536 0.899 0.966 0.955 0.966 0.984 0.888 0.949 0.929 Nipped-B-like protein pqn-85 [Source:UniProtKB/Swiss-Prot;Acc:Q95XZ5]
59. F56A3.3 npp-6 5425 7.535 0.907 0.976 0.963 0.976 0.910 0.924 0.947 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
60. R05H5.3 R05H5.3 15041 7.535 0.917 0.921 0.961 0.921 0.941 0.981 0.954 0.939
61. Y11D7A.12 flh-1 4612 7.533 0.900 0.960 0.983 0.960 0.968 0.881 0.953 0.928 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
62. F10C2.2 kup-1 3852 7.531 0.917 0.975 0.977 0.975 0.964 0.902 0.917 0.904
63. T25G3.3 T25G3.3 7285 7.53 0.913 0.969 0.973 0.969 0.966 0.887 0.903 0.950
64. D1081.8 cdc-5L 8553 7.53 0.938 0.958 0.982 0.958 0.953 0.898 0.916 0.927 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
65. K03H1.2 mog-1 4057 7.529 0.950 0.982 0.952 0.982 0.924 0.932 0.949 0.858 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
66. T23B12.4 natc-1 7759 7.528 0.933 0.970 0.975 0.970 0.956 0.884 0.923 0.917 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
67. T04A8.14 emb-5 11746 7.527 0.935 0.965 0.974 0.965 0.948 0.911 0.928 0.901 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
68. F36F2.3 rbpl-1 15376 7.527 0.832 0.965 0.954 0.965 0.977 0.945 0.967 0.922 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
69. T24F1.2 samp-1 8422 7.526 0.950 0.941 0.975 0.941 0.967 0.885 0.908 0.959 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
70. C27B7.1 spr-2 14958 7.525 0.927 0.971 0.985 0.971 0.948 0.876 0.896 0.951 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
71. F41E6.4 smk-1 22394 7.524 0.923 0.971 0.962 0.971 0.944 0.899 0.944 0.910 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
72. T05F1.6 hsr-9 13312 7.524 0.954 0.955 0.962 0.955 0.947 0.911 0.911 0.929
73. F58B6.3 par-2 3914 7.524 0.922 0.961 0.966 0.961 0.955 0.922 0.907 0.930
74. Y47G6A.8 crn-1 3494 7.523 0.919 0.941 0.978 0.941 0.952 0.922 0.920 0.950 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
75. T20G5.11 rde-4 3966 7.523 0.908 0.946 0.966 0.946 0.956 0.961 0.886 0.954 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
76. C50A2.2 cec-2 4169 7.522 0.931 0.970 0.985 0.970 0.969 0.908 0.855 0.934 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
77. F32H2.4 thoc-3 3861 7.521 0.946 0.944 0.960 0.944 0.978 0.892 0.918 0.939 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
78. VC5.4 mys-1 3996 7.521 0.968 0.966 0.967 0.966 0.952 0.879 0.910 0.913 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
79. R119.4 pqn-59 16065 7.521 0.905 0.945 0.952 0.945 0.956 0.941 0.927 0.950 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
80. F16D3.2 rsd-6 8211 7.521 0.930 0.947 0.970 0.947 0.958 0.918 0.944 0.907
81. C07G1.4 wsp-1 11226 7.521 0.922 0.970 0.974 0.970 0.933 0.898 0.927 0.927 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
82. K12D12.1 top-2 18694 7.518 0.947 0.962 0.978 0.962 0.909 0.896 0.931 0.933 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
83. F45H11.3 hpo-35 8299 7.517 0.902 0.939 0.935 0.939 0.987 0.950 0.911 0.954
84. F45E4.10 nrde-4 2741 7.515 0.897 0.967 0.973 0.967 0.910 0.924 0.918 0.959
85. T05C12.6 mig-5 5242 7.515 0.948 0.969 0.972 0.969 0.956 0.829 0.946 0.926 Cytoplasmic signalling transducer; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC49]
86. W03F9.5 ttb-1 8682 7.514 0.938 0.970 0.979 0.970 0.935 0.896 0.902 0.924 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
87. Y71F9B.16 dnj-30 4262 7.514 0.871 0.960 0.945 0.960 0.942 0.970 0.946 0.920 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
88. B0464.9 B0464.9 2997 7.513 0.888 0.966 0.951 0.966 0.974 0.895 0.918 0.955 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
89. C02B10.5 C02B10.5 9171 7.513 0.911 0.948 0.978 0.948 0.961 0.932 0.894 0.941
90. ZK686.4 snu-23 9040 7.513 0.937 0.968 0.988 0.968 0.972 0.904 0.883 0.893 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
91. T05H10.2 apn-1 5628 7.513 0.891 0.970 0.987 0.970 0.974 0.908 0.925 0.888 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
92. F58A4.8 tbg-1 2839 7.51 0.916 0.950 0.911 0.950 0.976 0.961 0.924 0.922 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
93. Y105E8A.17 ekl-4 4732 7.507 0.936 0.964 0.959 0.964 0.957 0.932 0.888 0.907
94. C03D6.4 npp-14 4889 7.507 0.883 0.953 0.963 0.953 0.968 0.911 0.942 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
95. F01G4.3 skih-2 3353 7.507 0.897 0.965 0.974 0.965 0.931 0.923 0.906 0.946 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
96. Y43F8C.14 ani-3 3013 7.506 0.925 0.959 0.976 0.959 0.934 0.929 0.896 0.928 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
97. ZK1320.12 taf-8 3558 7.505 0.939 0.948 0.965 0.948 0.948 0.925 0.907 0.925 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
98. R07G3.3 npp-21 3792 7.503 0.861 0.956 0.947 0.956 0.968 0.945 0.914 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
99. C16C10.2 C16C10.2 2303 7.503 0.932 0.939 0.984 0.939 0.941 0.920 0.949 0.899 Probable U3 small nucleolar RNA-associated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q09462]
100. F46A9.4 skr-2 16831 7.503 0.886 0.953 0.956 0.953 0.953 0.959 0.917 0.926 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]

There are 2505 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA