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Results for R07G3.3

Gene ID Gene Name Reads Transcripts Annotation
R07G3.3 npp-21 3792 R07G3.3a, R07G3.3b, R07G3.3c Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]

Genes with expression patterns similar to R07G3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R07G3.3 npp-21 3792 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
2. F35G12.8 smc-4 6202 7.766 0.951 0.976 0.967 0.976 0.980 0.977 0.972 0.967 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
3. F18E2.3 scc-3 13464 7.698 0.922 0.960 0.951 0.960 0.977 0.991 0.970 0.967 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
4. R11A8.7 R11A8.7 15531 7.68 0.949 0.967 0.944 0.967 0.961 0.969 0.954 0.969 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
5. T09A5.8 cec-3 5813 7.674 0.945 0.967 0.969 0.967 0.959 0.977 0.937 0.953 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
6. F16D3.2 rsd-6 8211 7.673 0.937 0.959 0.959 0.959 0.965 0.979 0.957 0.958
7. T01G9.4 npp-2 5361 7.666 0.902 0.962 0.940 0.962 0.982 0.966 0.972 0.980 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
8. E01A2.4 let-504 9788 7.655 0.931 0.975 0.945 0.975 0.970 0.979 0.921 0.959
9. F36A2.13 ubr-5 9047 7.645 0.948 0.957 0.975 0.957 0.978 0.970 0.926 0.934 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
10. C18G1.5 hil-4 21692 7.644 0.930 0.966 0.968 0.966 0.961 0.965 0.947 0.941 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
11. M106.1 mix-1 7950 7.642 0.928 0.964 0.945 0.964 0.970 0.966 0.939 0.966 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
12. F52B5.5 cep-1 2194 7.641 0.918 0.962 0.953 0.962 0.955 0.983 0.946 0.962 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
13. F52C9.8 pqe-1 7546 7.64 0.924 0.967 0.935 0.967 0.977 0.970 0.946 0.954 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
14. C32F10.5 hmg-3 5776 7.639 0.923 0.952 0.977 0.952 0.982 0.985 0.916 0.952 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
15. C38D4.3 mel-28 3515 7.637 0.924 0.937 0.951 0.937 0.985 0.979 0.956 0.968
16. M01E5.5 top-1 25458 7.633 0.936 0.964 0.956 0.964 0.966 0.977 0.928 0.942 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
17. C26E6.5 fsn-1 6615 7.629 0.913 0.955 0.951 0.955 0.975 0.986 0.939 0.955 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
18. F37A4.8 isw-1 9337 7.628 0.894 0.970 0.941 0.970 0.971 0.962 0.970 0.950 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
19. F41E6.4 smk-1 22394 7.625 0.915 0.966 0.951 0.966 0.962 0.964 0.947 0.954 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
20. F12F6.3 rib-1 10524 7.624 0.923 0.967 0.946 0.967 0.955 0.940 0.949 0.977 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
21. F01G4.3 skih-2 3353 7.623 0.939 0.956 0.915 0.956 0.976 0.959 0.941 0.981 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
22. C03D6.4 npp-14 4889 7.623 0.967 0.966 0.951 0.966 0.963 0.974 0.902 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
23. Y71G12B.1 chaf-2 3451 7.622 0.942 0.953 0.943 0.953 0.961 0.957 0.944 0.969 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
24. T20H4.4 adr-2 5495 7.621 0.918 0.960 0.943 0.960 0.960 0.986 0.956 0.938 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
25. F32A5.1 ada-2 8343 7.617 0.931 0.964 0.956 0.964 0.976 0.973 0.953 0.900 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
26. Y55D9A.1 efa-6 10012 7.617 0.914 0.954 0.938 0.954 0.976 0.954 0.961 0.966 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
27. T04A8.14 emb-5 11746 7.617 0.928 0.981 0.946 0.981 0.960 0.929 0.957 0.935 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
28. T07D4.3 rha-1 5898 7.614 0.908 0.974 0.934 0.974 0.974 0.966 0.950 0.934 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
29. Y39A1B.3 dpy-28 4459 7.607 0.939 0.955 0.934 0.955 0.978 0.986 0.944 0.916 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
30. K12D12.1 top-2 18694 7.607 0.926 0.965 0.930 0.965 0.947 0.974 0.942 0.958 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
31. T06D10.2 chaf-1 8121 7.606 0.920 0.945 0.962 0.945 0.968 0.976 0.950 0.940 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
32. F38A5.13 dnj-11 19678 7.606 0.915 0.957 0.960 0.957 0.978 0.979 0.890 0.970 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
33. F23B2.6 aly-2 7301 7.604 0.886 0.947 0.944 0.947 0.983 0.977 0.942 0.978 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
34. D1007.7 nrd-1 6738 7.602 0.947 0.952 0.939 0.952 0.961 0.968 0.917 0.966 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
35. C01G5.8 fan-1 1432 7.599 0.923 0.953 0.919 0.953 0.968 0.977 0.933 0.973 Fanconi-associated nuclease 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90740]
36. F43G9.10 mfap-1 9205 7.599 0.885 0.941 0.964 0.941 0.965 0.978 0.957 0.968 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
37. C39E9.12 C39E9.12 3588 7.598 0.911 0.943 0.948 0.943 0.961 0.965 0.958 0.969
38. Y49F6B.4 smu-2 4164 7.595 0.879 0.983 0.961 0.983 0.968 0.968 0.923 0.930 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
39. D2089.1 rsp-7 11057 7.594 0.905 0.979 0.937 0.979 0.957 0.975 0.935 0.927 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
40. C09H10.6 nasp-1 6094 7.593 0.900 0.960 0.973 0.960 0.962 0.949 0.957 0.932 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
41. Y73F8A.34 tag-349 7966 7.592 0.882 0.950 0.934 0.950 0.983 0.979 0.953 0.961
42. W03F9.5 ttb-1 8682 7.59 0.870 0.981 0.945 0.981 0.978 0.965 0.935 0.935 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
43. T20G5.11 rde-4 3966 7.589 0.909 0.960 0.934 0.960 0.959 0.987 0.923 0.957 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
44. Y61A9LA.8 sut-2 11388 7.589 0.891 0.963 0.943 0.963 0.986 0.979 0.941 0.923 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
45. F12F6.5 srgp-1 9048 7.587 0.918 0.972 0.940 0.972 0.918 0.953 0.941 0.973 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
46. D1081.9 D1081.9 3792 7.587 0.922 0.940 0.951 0.940 0.979 0.975 0.951 0.929
47. F11A10.1 lex-1 13720 7.586 0.927 0.951 0.944 0.951 0.961 0.964 0.957 0.931 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
48. ZK328.5 npp-10 7652 7.585 0.916 0.962 0.924 0.962 0.968 0.963 0.933 0.957 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
49. R06A4.7 mes-2 2612 7.585 0.951 0.955 0.959 0.955 0.977 0.978 0.938 0.872 Histone-lysine N-methyltransferase mes-2 [Source:UniProtKB/Swiss-Prot;Acc:O17514]
50. F36F2.3 rbpl-1 15376 7.58 0.877 0.965 0.940 0.965 0.975 0.977 0.938 0.943 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
51. T17E9.1 kin-18 8172 7.579 0.905 0.944 0.939 0.944 0.955 0.984 0.965 0.943 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
52. R01H2.6 ubc-18 13394 7.578 0.859 0.975 0.972 0.975 0.949 0.961 0.946 0.941 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
53. F57C2.6 spat-1 5615 7.576 0.905 0.970 0.942 0.970 0.973 0.958 0.911 0.947 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
54. C05C8.4 gei-6 6026 7.575 0.879 0.957 0.943 0.957 0.973 0.975 0.928 0.963 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
55. T24F1.2 samp-1 8422 7.575 0.895 0.951 0.946 0.951 0.974 0.970 0.939 0.949 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
56. F57B1.2 sun-1 5721 7.574 0.948 0.950 0.921 0.950 0.978 0.975 0.915 0.937 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
57. F35B12.5 sas-5 4606 7.572 0.914 0.929 0.965 0.929 0.947 0.968 0.960 0.960 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
58. ZK1098.8 mut-7 4940 7.571 0.932 0.936 0.963 0.936 0.983 0.939 0.930 0.952 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
59. Y49E10.3 pph-4.2 8662 7.571 0.880 0.963 0.947 0.963 0.972 0.952 0.951 0.943 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
60. B0464.9 B0464.9 2997 7.569 0.942 0.956 0.932 0.956 0.969 0.918 0.934 0.962 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
61. T10F2.3 ulp-1 8351 7.569 0.911 0.961 0.936 0.961 0.954 0.960 0.940 0.946 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
62. F55F8.4 cir-1 9437 7.567 0.921 0.959 0.927 0.959 0.965 0.951 0.929 0.956 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
63. C47D12.1 trr-1 4646 7.567 0.931 0.958 0.929 0.958 0.973 0.967 0.928 0.923 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
64. F46F11.10 F46F11.10 968 7.567 0.893 0.925 0.947 0.925 0.970 0.990 0.962 0.955
65. T01C3.1 cdt-2 5193 7.566 0.949 0.908 0.957 0.908 0.981 0.972 0.947 0.944 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
66. C43E11.1 acin-1 7781 7.566 0.909 0.963 0.909 0.963 0.982 0.971 0.953 0.916 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
67. T23B12.4 natc-1 7759 7.564 0.928 0.958 0.912 0.958 0.980 0.938 0.963 0.927 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
68. C36B1.8 gls-1 8617 7.563 0.930 0.942 0.931 0.942 0.980 0.954 0.936 0.948 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
69. F55G1.4 rod-1 1885 7.563 0.910 0.957 0.931 0.957 0.958 0.907 0.979 0.964 ROD (Drosophila RoughDeal) homolog [Source:RefSeq peptide;Acc:NP_501200]
70. C39E9.13 rfc-3 9443 7.56 0.894 0.961 0.947 0.961 0.974 0.966 0.950 0.907 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
71. F22D6.5 prpf-4 9522 7.56 0.881 0.954 0.935 0.954 0.972 0.967 0.927 0.970 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
72. C09G9.6 oma-1 18743 7.56 0.901 0.925 0.934 0.925 0.971 0.981 0.946 0.977
73. K04C2.4 brd-1 2439 7.558 0.878 0.965 0.949 0.965 0.945 0.971 0.928 0.957 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
74. Y65B4BL.2 deps-1 18277 7.557 0.931 0.965 0.933 0.965 0.950 0.944 0.942 0.927
75. F28B3.7 him-1 18274 7.554 0.918 0.956 0.927 0.956 0.978 0.955 0.931 0.933 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
76. C13B4.2 usp-14 9000 7.554 0.893 0.953 0.953 0.953 0.969 0.931 0.934 0.968 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
77. Y2H9A.1 mes-4 3566 7.552 0.931 0.934 0.971 0.934 0.964 0.970 0.908 0.940 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
78. W01B6.9 ndc-80 4670 7.552 0.847 0.964 0.931 0.964 0.970 0.986 0.932 0.958 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
79. T05F1.6 hsr-9 13312 7.55 0.887 0.961 0.919 0.961 0.966 0.960 0.938 0.958
80. Y106G6H.12 duo-3 2619 7.55 0.906 0.944 0.940 0.944 0.943 0.977 0.929 0.967 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_001293463]
81. T27F2.1 skp-1 3532 7.548 0.913 0.974 0.936 0.974 0.929 0.942 0.931 0.949 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
82. K10D2.3 cid-1 7175 7.548 0.891 0.965 0.924 0.965 0.969 0.978 0.914 0.942 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
83. Y105E8A.17 ekl-4 4732 7.548 0.909 0.961 0.935 0.961 0.980 0.943 0.923 0.936
84. Y53H1A.5 nfya-2 4166 7.547 0.907 0.952 0.913 0.952 0.964 0.983 0.909 0.967 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
85. F44A2.1 tag-153 16535 7.546 0.915 0.953 0.914 0.953 0.958 0.927 0.968 0.958
86. C36B1.3 rpb-3 4442 7.545 0.880 0.966 0.949 0.966 0.966 0.955 0.928 0.935 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
87. T07F8.3 gld-3 9324 7.545 0.904 0.950 0.918 0.950 0.973 0.983 0.918 0.949 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
88. F45E4.10 nrde-4 2741 7.545 0.947 0.957 0.935 0.957 0.914 0.978 0.888 0.969
89. F10C2.2 kup-1 3852 7.545 0.954 0.957 0.943 0.957 0.968 0.953 0.943 0.870
90. Y71D11A.2 smr-1 4976 7.544 0.915 0.952 0.947 0.952 0.967 0.936 0.950 0.925 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
91. C56C10.1 vps-33.2 2038 7.543 0.903 0.941 0.942 0.941 0.960 0.958 0.950 0.948 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
92. W02D9.1 pri-2 6048 7.541 0.896 0.976 0.978 0.976 0.965 0.934 0.921 0.895 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
93. ZK381.4 pgl-1 20651 7.541 0.898 0.975 0.893 0.975 0.951 0.957 0.945 0.947 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
94. F41H10.6 hda-6 3325 7.541 0.877 0.967 0.939 0.967 0.939 0.964 0.955 0.933 Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
95. F45E12.3 cul-4 3393 7.54 0.920 0.953 0.861 0.953 0.954 0.959 0.971 0.969 Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q17392]
96. C16C10.3 hrde-1 14922 7.539 0.904 0.957 0.939 0.957 0.963 0.941 0.921 0.957 Heritable RNAi Deficient [Source:RefSeq peptide;Acc:NP_497834]
97. F19F10.12 F19F10.12 2474 7.538 0.924 0.942 0.918 0.942 0.953 0.966 0.922 0.971
98. T06D8.6 cchl-1 26292 7.537 0.873 0.970 0.904 0.970 0.951 0.971 0.963 0.935 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
99. F10B5.6 emb-27 2578 7.537 0.905 0.956 0.900 0.956 0.977 0.979 0.931 0.933 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
100. ZK858.1 gld-4 14162 7.537 0.867 0.956 0.957 0.956 0.959 0.963 0.946 0.933 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA