C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for D2005.5

Gene ID Gene Name Reads Transcripts Annotation
D2005.5 drh-3 2293 D2005.5 Dicer Related Helicase [Source:RefSeq peptide;Acc:NP_492161]

Genes with expression patterns similar to D2005.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D2005.5 drh-3 2293 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Dicer Related Helicase [Source:RefSeq peptide;Acc:NP_492161]
2. F36F2.3 rbpl-1 15376 7.666 0.916 0.973 0.970 0.973 0.952 0.977 0.954 0.951 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
3. C53D5.6 imb-3 28921 7.657 0.885 0.977 0.955 0.977 0.974 0.957 0.953 0.979 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
4. F18E2.3 scc-3 13464 7.629 0.902 0.950 0.962 0.950 0.984 0.977 0.946 0.958 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
5. F20D12.1 csr-1 16351 7.623 0.921 0.962 0.965 0.962 0.957 0.967 0.921 0.968 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
6. C27D11.1 egl-45 28282 7.621 0.908 0.964 0.955 0.964 0.985 0.971 0.947 0.927 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
7. F46A9.4 skr-2 16831 7.619 0.892 0.967 0.970 0.967 0.975 0.977 0.945 0.926 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
8. Y48G8AL.6 smg-2 12561 7.616 0.910 0.960 0.972 0.960 0.963 0.973 0.913 0.965 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
9. F38A5.13 dnj-11 19678 7.616 0.924 0.968 0.958 0.968 0.991 0.969 0.887 0.951 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
10. F41E6.4 smk-1 22394 7.609 0.943 0.951 0.948 0.951 0.976 0.966 0.934 0.940 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
11. ZK381.4 pgl-1 20651 7.606 0.903 0.974 0.951 0.974 0.961 0.946 0.952 0.945 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
12. D2030.6 prg-1 26751 7.599 0.955 0.974 0.959 0.974 0.948 0.941 0.922 0.926 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
13. C08C3.4 cyk-7 12075 7.599 0.892 0.961 0.972 0.961 0.991 0.967 0.909 0.946 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
14. C50C3.6 prp-8 19582 7.596 0.944 0.968 0.949 0.968 0.962 0.945 0.915 0.945 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
15. F56D1.7 daz-1 23684 7.594 0.925 0.962 0.974 0.962 0.941 0.945 0.934 0.951 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
16. M106.1 mix-1 7950 7.593 0.899 0.944 0.963 0.944 0.964 0.950 0.962 0.967 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
17. R08D7.3 eif-3.D 6740 7.591 0.922 0.976 0.932 0.976 0.974 0.958 0.934 0.919 Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
18. C32E8.11 ubr-1 10338 7.59 0.928 0.965 0.956 0.965 0.984 0.948 0.922 0.922 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
19. T23D8.4 eif-3.C 15343 7.589 0.899 0.973 0.964 0.973 0.967 0.956 0.941 0.916 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
20. Y61A9LA.8 sut-2 11388 7.582 0.877 0.970 0.965 0.970 0.966 0.974 0.964 0.896 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
21. K10D2.3 cid-1 7175 7.572 0.914 0.970 0.965 0.970 0.962 0.982 0.921 0.888 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
22. D2089.1 rsp-7 11057 7.57 0.886 0.964 0.966 0.964 0.977 0.980 0.943 0.890 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
23. C06E7.1 sams-3 26921 7.568 0.913 0.966 0.949 0.966 0.964 0.957 0.958 0.895 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
24. T24C4.1 ucr-2.3 7057 7.564 0.879 0.964 0.951 0.964 0.988 0.978 0.948 0.892 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_497284]
25. W03F9.5 ttb-1 8682 7.562 0.863 0.954 0.951 0.954 0.982 0.963 0.945 0.950 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
26. F48E8.6 disl-2 8774 7.56 0.925 0.936 0.950 0.936 0.967 0.976 0.951 0.919 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
27. F45H11.3 hpo-35 8299 7.558 0.904 0.975 0.929 0.975 0.944 0.964 0.909 0.958
28. K12D12.1 top-2 18694 7.555 0.893 0.965 0.954 0.965 0.988 0.972 0.889 0.929 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
29. C08B11.6 arp-6 4646 7.553 0.864 0.957 0.949 0.957 0.967 0.956 0.947 0.956 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
30. T07D4.3 rha-1 5898 7.552 0.903 0.964 0.937 0.964 0.964 0.973 0.934 0.913 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
31. F52C9.8 pqe-1 7546 7.548 0.906 0.937 0.944 0.937 0.978 0.977 0.956 0.913 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
32. T12D8.2 drr-2 16208 7.548 0.870 0.960 0.954 0.960 0.973 0.974 0.930 0.927 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
33. F43G9.10 mfap-1 9205 7.547 0.896 0.950 0.931 0.950 0.953 0.955 0.959 0.953 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
34. K01C8.10 cct-4 15077 7.545 0.906 0.966 0.964 0.966 0.939 0.952 0.954 0.898 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
35. F22D6.5 prpf-4 9522 7.544 0.908 0.950 0.977 0.950 0.929 0.965 0.947 0.918 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
36. T10F2.1 gars-1 7204 7.542 0.916 0.970 0.960 0.970 0.965 0.981 0.915 0.865 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
37. ZK856.12 hpo-40 7855 7.542 0.919 0.956 0.964 0.956 0.943 0.958 0.932 0.914
38. Y81G3A.3 gcn-2 5831 7.54 0.889 0.941 0.945 0.941 0.972 0.988 0.936 0.928 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
39. C38D4.3 mel-28 3515 7.538 0.914 0.943 0.940 0.943 0.964 0.956 0.949 0.929
40. T23B12.7 dnj-22 2874 7.535 0.888 0.945 0.945 0.945 0.954 0.947 0.968 0.943 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
41. R06A4.7 mes-2 2612 7.535 0.901 0.947 0.917 0.947 0.978 0.965 0.946 0.934 Histone-lysine N-methyltransferase mes-2 [Source:UniProtKB/Swiss-Prot;Acc:O17514]
42. C43E11.1 acin-1 7781 7.534 0.910 0.945 0.974 0.945 0.954 0.955 0.944 0.907 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
43. T20H4.3 pars-1 8167 7.534 0.921 0.968 0.938 0.968 0.986 0.960 0.896 0.897 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
44. Y82E9BR.19 Y82E9BR.19 3683 7.534 0.926 0.937 0.922 0.937 0.948 0.986 0.963 0.915
45. T27D1.1 cyn-9 2940 7.533 0.885 0.927 0.930 0.927 0.969 0.981 0.953 0.961 Peptidyl-prolyl cis-trans isomerase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q09637]
46. F28B3.7 him-1 18274 7.532 0.924 0.966 0.946 0.966 0.958 0.951 0.965 0.856 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
47. Y41E3.4 qars-1 4391 7.531 0.890 0.953 0.947 0.953 0.952 0.971 0.924 0.941 Probable glutamine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:O62431]
48. M01E5.5 top-1 25458 7.531 0.917 0.953 0.952 0.953 0.974 0.962 0.941 0.879 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
49. F01G4.3 skih-2 3353 7.529 0.904 0.949 0.914 0.949 0.975 0.950 0.948 0.940 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
50. F45E4.10 nrde-4 2741 7.528 0.916 0.933 0.940 0.933 0.931 0.984 0.955 0.936
51. ZK328.5 npp-10 7652 7.525 0.869 0.958 0.969 0.958 0.983 0.956 0.891 0.941 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
52. T05F1.6 hsr-9 13312 7.52 0.881 0.952 0.945 0.952 0.963 0.939 0.959 0.929
53. F35G12.10 asb-1 9077 7.519 0.859 0.955 0.959 0.955 0.982 0.960 0.939 0.910 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_497938]
54. D1007.7 nrd-1 6738 7.518 0.911 0.946 0.945 0.946 0.984 0.972 0.914 0.900 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
55. F35G12.8 smc-4 6202 7.517 0.916 0.940 0.941 0.940 0.964 0.969 0.910 0.937 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
56. F46B6.3 smg-4 4959 7.515 0.926 0.941 0.949 0.941 0.955 0.930 0.945 0.928 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
57. ZC395.8 ztf-8 5521 7.514 0.894 0.917 0.946 0.917 0.967 0.979 0.955 0.939 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
58. F56A3.3 npp-6 5425 7.514 0.921 0.930 0.964 0.930 0.962 0.981 0.939 0.887 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
59. T06D8.6 cchl-1 26292 7.513 0.880 0.943 0.943 0.943 0.982 0.981 0.942 0.899 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
60. T20H4.4 adr-2 5495 7.511 0.900 0.932 0.936 0.932 0.981 0.974 0.927 0.929 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
61. R08D7.2 R08D7.2 1635 7.507 0.942 0.910 0.940 0.910 0.958 0.931 0.950 0.966 Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2 [Source:UniProtKB/Swiss-Prot;Acc:P30641]
62. Y110A7A.8 prp-31 4436 7.507 0.867 0.952 0.918 0.952 0.954 0.959 0.926 0.979 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
63. EEED8.5 mog-5 4698 7.506 0.945 0.960 0.960 0.960 0.952 0.949 0.944 0.836 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
64. T05E8.3 let-355 8169 7.505 0.883 0.971 0.962 0.971 0.916 0.959 0.918 0.925
65. ZC155.3 morc-1 4416 7.504 0.898 0.973 0.945 0.973 0.928 0.963 0.942 0.882 MORC (mouse microrchidia) family CW-type zinc finger protein [Source:RefSeq peptide;Acc:NP_498104]
66. C07G1.4 wsp-1 11226 7.499 0.920 0.947 0.953 0.947 0.921 0.947 0.924 0.940 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
67. B0041.7 xnp-1 9187 7.498 0.897 0.964 0.946 0.964 0.946 0.928 0.943 0.910 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
68. F19F10.11 F19F10.11 2683 7.497 0.922 0.922 0.944 0.922 0.968 0.911 0.957 0.951
69. Y54E10A.9 vbh-1 28746 7.496 0.873 0.959 0.955 0.959 0.968 0.941 0.941 0.900 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
70. M03C11.7 prp-3 2952 7.495 0.894 0.945 0.895 0.945 0.916 0.974 0.951 0.975 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_499300]
71. K04G2.1 iftb-1 12590 7.492 0.872 0.963 0.943 0.963 0.983 0.958 0.890 0.920 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
72. B0547.1 csn-5 3568 7.491 0.899 0.927 0.927 0.927 0.978 0.980 0.948 0.905 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
73. Y67D8C.5 eel-1 30623 7.491 0.918 0.971 0.955 0.971 0.950 0.910 0.885 0.931 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
74. C27A2.1 smc-5 2176 7.491 0.880 0.956 0.922 0.956 0.975 0.956 0.886 0.960 SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_494935]
75. F26F4.10 rars-1 9971 7.49 0.901 0.949 0.958 0.949 0.951 0.950 0.932 0.900 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
76. C05C8.4 gei-6 6026 7.49 0.851 0.936 0.931 0.936 0.966 0.973 0.943 0.954 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
77. F36A4.7 ama-1 13620 7.489 0.933 0.955 0.957 0.955 0.948 0.955 0.913 0.873 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
78. F28D9.1 rsr-1 4282 7.489 0.881 0.948 0.954 0.948 0.949 0.981 0.914 0.914 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
79. W05B10.1 his-74 21926 7.487 0.866 0.948 0.953 0.948 0.975 0.961 0.936 0.900 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
80. F31D4.3 fkb-6 21313 7.485 0.881 0.964 0.967 0.964 0.974 0.955 0.886 0.894 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
81. Y65B4BR.5 icd-2 58321 7.483 0.861 0.967 0.943 0.967 0.944 0.929 0.954 0.918 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
82. E01A2.4 let-504 9788 7.482 0.899 0.945 0.950 0.945 0.921 0.955 0.927 0.940
83. K08E3.8 mdt-29 4678 7.481 0.903 0.957 0.921 0.957 0.949 0.923 0.918 0.953 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
84. K08F11.3 cif-1 10218 7.481 0.883 0.965 0.948 0.965 0.929 0.937 0.923 0.931 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
85. F37A4.8 isw-1 9337 7.481 0.892 0.950 0.946 0.950 0.985 0.948 0.899 0.911 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
86. C32F10.5 hmg-3 5776 7.48 0.931 0.927 0.923 0.927 0.970 0.956 0.932 0.914 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
87. F22D6.6 ekl-1 2926 7.479 0.898 0.947 0.935 0.947 0.942 0.982 0.925 0.903
88. R07G3.3 npp-21 3792 7.477 0.865 0.947 0.908 0.947 0.969 0.988 0.903 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
89. F10G8.3 rae-1 7542 7.476 0.878 0.944 0.956 0.944 0.947 0.962 0.974 0.871 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
90. C34E10.5 prmt-5 12277 7.474 0.890 0.970 0.968 0.970 0.902 0.931 0.927 0.916 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
91. C34B2.7 sdha-2 3043 7.473 0.863 0.944 0.927 0.944 0.985 0.981 0.935 0.894 Succinate dehydrogenase [Source:RefSeq peptide;Acc:NP_492798]
92. R144.7 larp-1 24669 7.472 0.880 0.973 0.932 0.973 0.922 0.938 0.916 0.938 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
93. F32A5.1 ada-2 8343 7.471 0.918 0.930 0.926 0.930 0.959 0.960 0.949 0.899 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
94. R13F6.10 cra-1 11610 7.47 0.904 0.962 0.953 0.962 0.925 0.917 0.919 0.928 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
95. F08F8.10 F08F8.10 2087 7.47 0.923 0.940 0.926 0.940 0.977 0.951 0.928 0.885
96. T01G1.3 sec-31 10504 7.47 0.915 0.950 0.940 0.950 0.958 0.964 0.907 0.886 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
97. F08H9.1 coh-3 2202 7.469 0.872 0.968 0.955 0.968 0.963 0.970 0.897 0.876 COHesin family [Source:RefSeq peptide;Acc:NP_506583]
98. Y73B6BL.5 seu-1 8719 7.469 0.915 0.981 0.953 0.981 0.943 0.928 0.848 0.920 Suppressor of Ectopic Unc-5 [Source:RefSeq peptide;Acc:NP_001293775]
99. F56D2.6 ddx-15 12282 7.469 0.949 0.963 0.947 0.963 0.874 0.891 0.932 0.950 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
100. B0025.2 csn-2 5205 7.469 0.913 0.933 0.957 0.933 0.948 0.956 0.933 0.896 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]

There are 1382 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA