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Results for F28D9.1

Gene ID Gene Name Reads Transcripts Annotation
F28D9.1 rsr-1 4282 F28D9.1 SR protein related [Source:RefSeq peptide;Acc:NP_492875]

Genes with expression patterns similar to F28D9.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28D9.1 rsr-1 4282 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
2. D2089.1 rsp-7 11057 7.717 0.968 0.976 0.978 0.976 0.962 0.978 0.930 0.949 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
3. Y61A9LA.8 sut-2 11388 7.708 0.944 0.976 0.981 0.976 0.982 0.965 0.933 0.951 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
4. K02F2.3 teg-4 3873 7.703 0.944 0.978 0.972 0.978 0.941 0.960 0.961 0.969 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
5. F18E2.3 scc-3 13464 7.702 0.951 0.984 0.972 0.984 0.970 0.970 0.933 0.938 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
6. C43E11.1 acin-1 7781 7.693 0.937 0.978 0.970 0.978 0.962 0.962 0.953 0.953 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
7. K12D12.1 top-2 18694 7.69 0.975 0.982 0.976 0.982 0.937 0.954 0.939 0.945 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
8. Y48G8AL.6 smg-2 12561 7.684 0.951 0.960 0.962 0.960 0.964 0.977 0.947 0.963 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
9. T12D8.2 drr-2 16208 7.681 0.945 0.947 0.960 0.947 0.959 0.978 0.978 0.967 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
10. F28B3.7 him-1 18274 7.677 0.969 0.987 0.952 0.987 0.961 0.969 0.932 0.920 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
11. ZK328.5 npp-10 7652 7.677 0.958 0.985 0.978 0.985 0.956 0.950 0.909 0.956 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
12. F41E6.4 smk-1 22394 7.676 0.967 0.983 0.958 0.983 0.957 0.949 0.925 0.954 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
13. C34E10.5 prmt-5 12277 7.674 0.920 0.966 0.969 0.966 0.964 0.966 0.957 0.966 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
14. F37E3.1 ncbp-1 5649 7.673 0.963 0.970 0.964 0.970 0.962 0.958 0.937 0.949 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
15. Y65B4BL.2 deps-1 18277 7.673 0.970 0.985 0.971 0.985 0.950 0.944 0.933 0.935
16. B0547.1 csn-5 3568 7.669 0.936 0.960 0.958 0.960 0.972 0.974 0.949 0.960 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
17. F42A6.7 hrp-1 28201 7.668 0.918 0.987 0.973 0.987 0.943 0.947 0.950 0.963 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
18. K01G5.4 ran-1 32379 7.666 0.934 0.985 0.984 0.985 0.928 0.935 0.948 0.967 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
19. F56D1.7 daz-1 23684 7.663 0.936 0.969 0.976 0.969 0.961 0.954 0.946 0.952 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
20. T04A8.14 emb-5 11746 7.661 0.952 0.980 0.971 0.980 0.964 0.956 0.938 0.920 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
21. C08B11.5 sap-49 10553 7.658 0.916 0.979 0.967 0.979 0.952 0.958 0.963 0.944 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
22. C18G1.5 hil-4 21692 7.658 0.941 0.969 0.970 0.969 0.949 0.960 0.960 0.940 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
23. Y116A8C.35 uaf-2 13808 7.655 0.918 0.980 0.971 0.980 0.962 0.943 0.940 0.961 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
24. F46A9.4 skr-2 16831 7.655 0.937 0.947 0.968 0.947 0.968 0.978 0.962 0.948 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
25. Y46G5A.4 snrp-200 13827 7.654 0.962 0.964 0.967 0.964 0.950 0.940 0.956 0.951 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
26. W03F9.5 ttb-1 8682 7.653 0.943 0.983 0.966 0.983 0.954 0.941 0.927 0.956 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
27. F36F2.3 rbpl-1 15376 7.651 0.919 0.981 0.960 0.981 0.981 0.966 0.922 0.941 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
28. T01G9.4 npp-2 5361 7.65 0.949 0.979 0.945 0.979 0.960 0.951 0.942 0.945 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
29. T07D4.3 rha-1 5898 7.65 0.928 0.973 0.957 0.973 0.963 0.977 0.944 0.935 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
30. T27F2.1 skp-1 3532 7.65 0.937 0.965 0.977 0.965 0.952 0.962 0.929 0.963 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
31. Y111B2A.18 rsp-3 43731 7.65 0.938 0.969 0.972 0.969 0.941 0.936 0.959 0.966 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
32. T05F1.6 hsr-9 13312 7.646 0.958 0.982 0.961 0.982 0.972 0.932 0.931 0.928
33. Y40B1B.5 eif-3.J 15061 7.646 0.926 0.959 0.947 0.959 0.976 0.956 0.968 0.955 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
34. K02F3.11 rnp-5 6205 7.644 0.944 0.963 0.975 0.963 0.946 0.961 0.923 0.969 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
35. C53D5.6 imb-3 28921 7.644 0.898 0.970 0.964 0.970 0.973 0.958 0.954 0.957 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
36. C36B1.8 gls-1 8617 7.643 0.941 0.968 0.955 0.968 0.965 0.953 0.959 0.934 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
37. C17E4.10 C17E4.10 7034 7.643 0.956 0.947 0.966 0.947 0.979 0.982 0.935 0.931
38. F23F1.1 nfyc-1 9983 7.643 0.963 0.969 0.969 0.969 0.898 0.965 0.959 0.951 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
39. T09A5.8 cec-3 5813 7.642 0.894 0.972 0.952 0.972 0.952 0.982 0.964 0.954 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
40. F48E8.6 disl-2 8774 7.641 0.928 0.967 0.952 0.967 0.971 0.968 0.935 0.953 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
41. C36B1.3 rpb-3 4442 7.638 0.889 0.976 0.957 0.976 0.974 0.980 0.923 0.963 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
42. E01A2.4 let-504 9788 7.637 0.941 0.983 0.950 0.983 0.961 0.954 0.946 0.919
43. W01B6.9 ndc-80 4670 7.636 0.922 0.970 0.973 0.970 0.960 0.953 0.942 0.946 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
44. EEED8.7 rsp-4 13043 7.635 0.932 0.963 0.973 0.963 0.955 0.963 0.929 0.957 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
45. C02B10.5 C02B10.5 9171 7.635 0.918 0.959 0.972 0.959 0.964 0.962 0.947 0.954
46. F32E10.6 cec-5 10643 7.634 0.955 0.953 0.964 0.953 0.963 0.947 0.941 0.958 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
47. C48B4.11 C48B4.11 4384 7.633 0.944 0.981 0.980 0.981 0.944 0.934 0.927 0.942
48. R13F6.10 cra-1 11610 7.633 0.927 0.968 0.944 0.968 0.961 0.951 0.965 0.949 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
49. T19B4.2 npp-7 13073 7.633 0.940 0.980 0.956 0.980 0.955 0.944 0.948 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
50. T06D8.6 cchl-1 26292 7.631 0.932 0.974 0.974 0.974 0.959 0.958 0.939 0.921 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
51. ZK381.4 pgl-1 20651 7.631 0.938 0.975 0.959 0.975 0.941 0.946 0.958 0.939 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
52. Y47G6A.20 rnp-6 5542 7.631 0.928 0.973 0.930 0.973 0.933 0.981 0.955 0.958 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
53. F22D6.3 nars-1 18624 7.631 0.893 0.983 0.956 0.983 0.968 0.945 0.943 0.960 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
54. Y54E5A.4 npp-4 6288 7.629 0.919 0.979 0.969 0.979 0.947 0.967 0.919 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
55. K10D2.3 cid-1 7175 7.629 0.914 0.981 0.965 0.981 0.977 0.965 0.919 0.927 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
56. C39E9.13 rfc-3 9443 7.628 0.920 0.982 0.975 0.982 0.961 0.950 0.948 0.910 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
57. Y71D11A.2 smr-1 4976 7.628 0.940 0.973 0.958 0.973 0.957 0.949 0.923 0.955 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
58. C47D12.6 tars-1 23488 7.628 0.938 0.967 0.943 0.967 0.984 0.957 0.918 0.954 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
59. T13F2.7 sna-2 4771 7.628 0.948 0.965 0.898 0.965 0.984 0.961 0.953 0.954 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
60. T12D8.3 acbp-5 6816 7.627 0.907 0.980 0.964 0.980 0.973 0.952 0.949 0.922 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
61. D2030.6 prg-1 26751 7.627 0.935 0.957 0.970 0.957 0.976 0.969 0.945 0.918 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
62. D1054.14 prp-38 6504 7.627 0.906 0.984 0.952 0.984 0.973 0.986 0.889 0.953 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
63. Y105E8A.17 ekl-4 4732 7.627 0.950 0.971 0.962 0.971 0.959 0.951 0.940 0.923
64. ZK1098.8 mut-7 4940 7.627 0.927 0.950 0.971 0.950 0.972 0.974 0.933 0.950 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
65. K01C8.10 cct-4 15077 7.626 0.937 0.972 0.961 0.972 0.964 0.931 0.949 0.940 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
66. T10F2.4 prp-19 11298 7.624 0.919 0.968 0.973 0.968 0.962 0.944 0.940 0.950 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
67. Y73F8A.34 tag-349 7966 7.624 0.945 0.948 0.966 0.948 0.956 0.978 0.936 0.947
68. C48E7.3 lpd-2 10330 7.624 0.945 0.972 0.972 0.972 0.961 0.949 0.919 0.934 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
69. T01G1.3 sec-31 10504 7.623 0.959 0.980 0.958 0.980 0.977 0.967 0.847 0.955 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
70. T05E8.3 let-355 8169 7.622 0.924 0.979 0.966 0.979 0.959 0.963 0.944 0.908
71. T23D8.4 eif-3.C 15343 7.621 0.914 0.949 0.952 0.949 0.984 0.960 0.959 0.954 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
72. F36A4.7 ama-1 13620 7.62 0.929 0.962 0.961 0.962 0.965 0.967 0.937 0.937 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
73. Y56A3A.1 ntl-3 10450 7.62 0.934 0.966 0.950 0.966 0.985 0.943 0.922 0.954 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
74. Y113G7B.23 swsn-1 13766 7.618 0.941 0.981 0.953 0.981 0.957 0.935 0.925 0.945 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
75. C27B7.1 spr-2 14958 7.616 0.942 0.985 0.970 0.985 0.945 0.931 0.929 0.929 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
76. K03H1.2 mog-1 4057 7.616 0.975 0.980 0.953 0.980 0.919 0.970 0.927 0.912 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
77. D1081.9 D1081.9 3792 7.614 0.922 0.970 0.972 0.970 0.984 0.970 0.931 0.895
78. C03D6.4 npp-14 4889 7.613 0.925 0.972 0.940 0.972 0.956 0.961 0.941 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
79. C18D11.4 rsp-8 18308 7.611 0.930 0.966 0.975 0.966 0.961 0.939 0.934 0.940 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
80. Y71F9B.16 dnj-30 4262 7.611 0.885 0.963 0.947 0.963 0.946 0.988 0.961 0.958 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
81. T07C4.10 T07C4.10 1563 7.611 0.952 0.957 0.970 0.957 0.955 0.944 0.951 0.925
82. Y71G12B.1 chaf-2 3451 7.61 0.948 0.965 0.942 0.965 0.947 0.927 0.971 0.945 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
83. C50C3.6 prp-8 19582 7.61 0.925 0.961 0.939 0.961 0.978 0.953 0.943 0.950 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
84. Y38A8.3 ulp-2 7403 7.608 0.958 0.963 0.955 0.963 0.963 0.948 0.922 0.936 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
85. Y39G10AR.7 ekl-7 7072 7.607 0.934 0.974 0.964 0.974 0.949 0.946 0.913 0.953
86. C52E4.6 cyl-1 6405 7.606 0.913 0.975 0.934 0.975 0.954 0.967 0.922 0.966 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
87. Y17G7A.1 hmg-12 29989 7.606 0.943 0.985 0.965 0.985 0.936 0.924 0.951 0.917 HMG [Source:RefSeq peptide;Acc:NP_496544]
88. B0464.2 ctr-9 7610 7.605 0.924 0.977 0.973 0.977 0.927 0.934 0.942 0.951 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
89. F56D2.6 ddx-15 12282 7.605 0.927 0.969 0.968 0.969 0.944 0.928 0.944 0.956 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
90. F10G8.3 rae-1 7542 7.604 0.887 0.976 0.962 0.976 0.959 0.972 0.923 0.949 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
91. Y41E3.9 fcd-2 2268 7.603 0.940 0.965 0.963 0.965 0.967 0.969 0.919 0.915 human FANCD2 (Fanconi's anemia defect) ortholog [Source:RefSeq peptide;Acc:NP_001255848]
92. R151.8 R151.8 2527 7.603 0.932 0.958 0.911 0.958 0.964 0.977 0.941 0.962
93. ZK1127.12 ZK1127.12 2029 7.602 0.953 0.966 0.962 0.966 0.949 0.962 0.930 0.914
94. T08A11.2 T08A11.2 12269 7.6 0.933 0.979 0.962 0.979 0.956 0.957 0.937 0.897
95. ZC395.8 ztf-8 5521 7.6 0.941 0.963 0.952 0.963 0.969 0.976 0.906 0.930 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
96. M01D7.6 emr-1 4358 7.6 0.915 0.953 0.953 0.953 0.967 0.956 0.952 0.951 Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
97. K11D12.2 pqn-51 15951 7.599 0.946 0.981 0.977 0.981 0.953 0.951 0.881 0.929 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
98. Y39G10AR.9 Y39G10AR.9 3972 7.599 0.907 0.981 0.907 0.981 0.977 0.955 0.939 0.952
99. Y43F8C.14 ani-3 3013 7.598 0.907 0.955 0.967 0.955 0.953 0.957 0.963 0.941 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
100. Y37E11AM.1 smgl-2 1915 7.597 0.937 0.960 0.951 0.960 0.933 0.959 0.937 0.960

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA