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Results for M01E5.5

Gene ID Gene Name Reads Transcripts Annotation
M01E5.5 top-1 25458 M01E5.5a, M01E5.5b DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]

Genes with expression patterns similar to M01E5.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M01E5.5 top-1 25458 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
2. M106.1 mix-1 7950 7.755 0.951 0.974 0.966 0.974 0.987 0.992 0.988 0.923 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
3. F38A5.13 dnj-11 19678 7.751 0.964 0.982 0.974 0.982 0.990 0.990 0.920 0.949 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
4. F16D3.2 rsd-6 8211 7.736 0.930 0.961 0.971 0.961 0.993 0.981 0.969 0.970
5. F43G9.10 mfap-1 9205 7.729 0.955 0.963 0.967 0.963 0.985 0.984 0.982 0.930 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
6. F36F2.3 rbpl-1 15376 7.725 0.943 0.982 0.982 0.982 0.953 0.983 0.984 0.916 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
7. F41E6.4 smk-1 22394 7.721 0.963 0.972 0.962 0.972 0.993 0.974 0.952 0.933 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
8. F52C9.8 pqe-1 7546 7.708 0.966 0.969 0.971 0.969 0.982 0.973 0.981 0.897 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
9. F36A2.13 ubr-5 9047 7.706 0.970 0.970 0.967 0.970 0.954 0.971 0.966 0.938 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
10. F12F6.3 rib-1 10524 7.702 0.925 0.990 0.962 0.990 0.980 0.976 0.941 0.938 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
11. T06D10.2 chaf-1 8121 7.701 0.962 0.965 0.958 0.965 0.962 0.983 0.956 0.950 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
12. F32A5.1 ada-2 8343 7.7 0.965 0.968 0.970 0.968 0.983 0.988 0.976 0.882 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
13. F12F6.5 srgp-1 9048 7.697 0.910 0.989 0.959 0.989 0.972 0.975 0.953 0.950 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
14. F37A4.8 isw-1 9337 7.697 0.947 0.979 0.958 0.979 0.988 0.968 0.922 0.956 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
15. C32F10.5 hmg-3 5776 7.693 0.962 0.977 0.974 0.977 0.956 0.970 0.952 0.925 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
16. F22D6.5 prpf-4 9522 7.685 0.960 0.968 0.964 0.968 0.945 0.986 0.976 0.918 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
17. C54G10.2 rfc-1 8814 7.684 0.952 0.984 0.968 0.984 0.967 0.950 0.928 0.951 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
18. ZC404.9 gck-2 8382 7.677 0.904 0.963 0.950 0.963 0.995 0.972 0.967 0.963 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
19. Y61A9LA.8 sut-2 11388 7.676 0.944 0.975 0.968 0.975 0.967 0.983 0.957 0.907 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
20. F11A10.1 lex-1 13720 7.673 0.933 0.962 0.963 0.962 0.988 0.973 0.936 0.956 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
21. Y49E10.19 ani-1 12757 7.673 0.950 0.975 0.946 0.975 0.950 0.977 0.939 0.961 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
22. F18E2.3 scc-3 13464 7.668 0.950 0.968 0.981 0.968 0.990 0.978 0.942 0.891 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
23. Y2H9A.1 mes-4 3566 7.668 0.948 0.976 0.946 0.976 0.958 0.969 0.977 0.918 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
24. T17E9.1 kin-18 8172 7.664 0.950 0.974 0.954 0.974 0.961 0.986 0.952 0.913 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
25. R01H2.6 ubc-18 13394 7.661 0.876 0.980 0.955 0.980 0.981 0.986 0.944 0.959 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
26. F55F8.4 cir-1 9437 7.658 0.968 0.962 0.959 0.962 0.931 0.968 0.950 0.958 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
27. T06D8.6 cchl-1 26292 7.654 0.914 0.973 0.937 0.973 0.988 0.965 0.941 0.963 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
28. VC5.4 mys-1 3996 7.648 0.910 0.971 0.957 0.971 0.981 0.970 0.968 0.920 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
29. D1081.9 D1081.9 3792 7.647 0.951 0.965 0.967 0.965 0.978 0.978 0.911 0.932
30. ZK287.5 rbx-1 13546 7.642 0.934 0.987 0.967 0.987 0.977 0.948 0.878 0.964 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
31. D2089.1 rsp-7 11057 7.639 0.938 0.972 0.963 0.972 0.969 0.962 0.942 0.921 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
32. T23B12.4 natc-1 7759 7.638 0.942 0.956 0.952 0.956 0.984 0.976 0.937 0.935 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
33. R07G3.3 npp-21 3792 7.633 0.936 0.964 0.956 0.964 0.966 0.977 0.928 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
34. D1007.7 nrd-1 6738 7.625 0.960 0.961 0.967 0.961 0.984 0.968 0.921 0.903 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
35. T05F1.6 hsr-9 13312 7.624 0.936 0.969 0.944 0.969 0.963 0.975 0.937 0.931
36. C02F4.1 ced-5 9096 7.622 0.929 0.976 0.952 0.976 0.988 0.944 0.948 0.909 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
37. R119.4 pqn-59 16065 7.619 0.963 0.974 0.960 0.974 0.952 0.949 0.954 0.893 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
38. D1022.7 aka-1 10681 7.614 0.921 0.968 0.954 0.968 0.990 0.966 0.920 0.927 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
39. T20H4.4 adr-2 5495 7.614 0.955 0.960 0.955 0.960 0.990 0.985 0.935 0.874 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
40. C13B4.2 usp-14 9000 7.613 0.914 0.971 0.960 0.971 0.988 0.956 0.893 0.960 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
41. T10F2.3 ulp-1 8351 7.613 0.915 0.961 0.952 0.961 0.986 0.974 0.929 0.935 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
42. C16A3.8 thoc-2 5058 7.613 0.923 0.958 0.912 0.958 0.985 0.979 0.941 0.957 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_498392]
43. CD4.6 pas-6 18332 7.612 0.899 0.974 0.957 0.974 0.968 0.982 0.902 0.956 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
44. W05B10.1 his-74 21926 7.612 0.918 0.973 0.941 0.973 0.983 0.980 0.914 0.930 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
45. C38D4.3 mel-28 3515 7.608 0.957 0.944 0.957 0.944 0.978 0.970 0.960 0.898
46. R11A8.7 R11A8.7 15531 7.607 0.961 0.962 0.955 0.962 0.950 0.956 0.932 0.929 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
47. Y105E8A.17 ekl-4 4732 7.607 0.909 0.968 0.963 0.968 0.975 0.958 0.923 0.943
48. C07G1.4 wsp-1 11226 7.607 0.935 0.969 0.962 0.969 0.958 0.957 0.950 0.907 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
49. Y55D9A.1 efa-6 10012 7.605 0.923 0.951 0.955 0.951 0.993 0.952 0.943 0.937 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
50. F35B12.5 sas-5 4606 7.605 0.931 0.944 0.955 0.944 0.966 0.959 0.963 0.943 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
51. F35G12.8 smc-4 6202 7.604 0.952 0.967 0.967 0.967 0.962 0.946 0.928 0.915 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
52. C05C10.6 ufd-3 6304 7.603 0.933 0.970 0.947 0.970 0.972 0.945 0.919 0.947 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
53. C25A1.5 C25A1.5 9135 7.603 0.929 0.962 0.935 0.962 0.973 0.973 0.898 0.971
54. F01G4.3 skih-2 3353 7.603 0.960 0.955 0.938 0.955 0.954 0.977 0.945 0.919 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
55. Y50D7A.4 hpo-29 12443 7.602 0.920 0.942 0.932 0.942 0.973 0.989 0.930 0.974
56. Y43C5A.6 rad-51 5327 7.601 0.909 0.971 0.952 0.971 0.969 0.953 0.917 0.959 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
57. C39E9.12 C39E9.12 3588 7.6 0.946 0.931 0.955 0.931 0.973 0.959 0.953 0.952
58. K01C8.10 cct-4 15077 7.598 0.932 0.962 0.942 0.962 0.967 0.987 0.935 0.911 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
59. ZK858.1 gld-4 14162 7.596 0.897 0.954 0.956 0.954 0.964 0.975 0.953 0.943 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
60. T01G9.4 npp-2 5361 7.596 0.958 0.962 0.939 0.962 0.981 0.961 0.880 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
61. K10B2.1 lin-23 15896 7.595 0.916 0.955 0.958 0.955 0.981 0.968 0.939 0.923 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
62. T07D4.3 rha-1 5898 7.592 0.948 0.985 0.965 0.985 0.949 0.953 0.942 0.865 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
63. E01A2.4 let-504 9788 7.592 0.954 0.976 0.971 0.976 0.931 0.976 0.900 0.908
64. F44A2.1 tag-153 16535 7.591 0.930 0.959 0.934 0.959 0.978 0.967 0.911 0.953
65. F52B5.5 cep-1 2194 7.59 0.924 0.983 0.928 0.983 0.965 0.960 0.924 0.923 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
66. C47D12.1 trr-1 4646 7.59 0.929 0.972 0.946 0.972 0.956 0.960 0.931 0.924 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
67. F08F8.10 F08F8.10 2087 7.587 0.912 0.962 0.923 0.962 0.969 0.973 0.918 0.968
68. B0041.7 xnp-1 9187 7.587 0.955 0.967 0.963 0.967 0.948 0.941 0.977 0.869 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
69. K08D12.1 pbs-1 21677 7.586 0.910 0.977 0.954 0.977 0.980 0.953 0.888 0.947 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
70. F19F10.11 F19F10.11 2683 7.586 0.917 0.962 0.961 0.962 0.968 0.977 0.975 0.864
71. C16A3.7 nfx-1 4680 7.585 0.933 0.968 0.981 0.968 0.965 0.969 0.875 0.926 Transcriptional repressor NF-X1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18034]
72. C10C6.6 catp-8 8079 7.585 0.940 0.974 0.928 0.974 0.978 0.939 0.914 0.938 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
73. C36B1.8 gls-1 8617 7.585 0.930 0.960 0.960 0.960 0.964 0.966 0.959 0.886 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
74. T27C4.4 lin-40 16565 7.584 0.960 0.968 0.970 0.968 0.975 0.907 0.952 0.884
75. Y17G7B.17 Y17G7B.17 11197 7.584 0.878 0.965 0.946 0.965 0.975 0.983 0.969 0.903
76. EEED8.7 rsp-4 13043 7.584 0.912 0.979 0.950 0.979 0.977 0.983 0.891 0.913 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
77. F01G4.1 swsn-4 14710 7.582 0.940 0.961 0.961 0.961 0.980 0.939 0.901 0.939 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
78. T21E12.4 dhc-1 20370 7.581 0.942 0.963 0.944 0.963 0.987 0.947 0.869 0.966 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
79. F28B3.7 him-1 18274 7.579 0.964 0.959 0.957 0.959 0.962 0.942 0.925 0.911 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
80. C56C10.1 vps-33.2 2038 7.578 0.912 0.954 0.937 0.954 0.983 0.963 0.955 0.920 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
81. Y54F10AM.4 ceh-44 5910 7.578 0.950 0.960 0.934 0.960 0.964 0.952 0.938 0.920 Homeobox protein cut-like ceh-44 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL02]
82. ZK328.5 npp-10 7652 7.576 0.943 0.963 0.964 0.963 0.973 0.970 0.876 0.924 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
83. F58G11.1 letm-1 13414 7.575 0.918 0.972 0.930 0.972 0.984 0.951 0.931 0.917 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
84. Y81G3A.3 gcn-2 5831 7.573 0.909 0.952 0.943 0.952 0.971 0.959 0.955 0.932 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
85. R06A4.7 mes-2 2612 7.572 0.950 0.955 0.973 0.955 0.973 0.978 0.971 0.817 Histone-lysine N-methyltransferase mes-2 [Source:UniProtKB/Swiss-Prot;Acc:O17514]
86. C32E8.11 ubr-1 10338 7.572 0.933 0.931 0.939 0.931 0.983 0.976 0.966 0.913 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
87. K10D2.3 cid-1 7175 7.572 0.901 0.971 0.950 0.971 0.965 0.972 0.894 0.948 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
88. Y32F6A.3 pap-1 11972 7.569 0.932 0.970 0.940 0.970 0.978 0.949 0.918 0.912 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
89. ZC395.8 ztf-8 5521 7.568 0.954 0.975 0.944 0.975 0.974 0.960 0.900 0.886 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
90. C37C3.1 C37C3.1 2206 7.568 0.903 0.958 0.931 0.958 0.971 0.988 0.950 0.909
91. ZK1098.2 ZK1098.2 2172 7.567 0.960 0.923 0.981 0.923 0.957 0.961 0.967 0.895
92. K10B2.5 ani-2 11397 7.567 0.894 0.963 0.954 0.963 0.979 0.950 0.891 0.973 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
93. C03D6.4 npp-14 4889 7.567 0.941 0.963 0.949 0.963 0.938 0.958 0.941 0.914 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
94. Y40B10A.1 lbp-9 30119 7.567 0.909 0.980 0.944 0.980 0.972 0.931 0.882 0.969 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
95. B0334.5 B0334.5 4713 7.566 0.917 0.958 0.956 0.958 0.976 0.970 0.901 0.930
96. C02F5.9 pbs-6 20120 7.563 0.865 0.975 0.948 0.975 0.971 0.943 0.912 0.974 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
97. DY3.2 lmn-1 22449 7.563 0.925 0.973 0.928 0.973 0.959 0.983 0.847 0.975 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
98. K12D12.1 top-2 18694 7.562 0.948 0.960 0.958 0.960 0.965 0.958 0.871 0.942 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
99. C26E6.5 fsn-1 6615 7.562 0.925 0.979 0.957 0.979 0.960 0.972 0.898 0.892 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
100. C25H3.6 mdt-26 9423 7.561 0.948 0.974 0.960 0.974 0.953 0.974 0.882 0.896 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA