C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for H06O01.2

Gene ID Gene Name Reads Transcripts Annotation
H06O01.2 chd-1 7853 H06O01.2 Chromodomain and Helicase Domain protein [Source:RefSeq peptide;Acc:NP_491994]

Genes with expression patterns similar to H06O01.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. H06O01.2 chd-1 7853 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Chromodomain and Helicase Domain protein [Source:RefSeq peptide;Acc:NP_491994]
2. T07D4.3 rha-1 5898 7.626 0.932 0.946 0.967 0.946 0.958 0.957 0.973 0.947 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
3. C03D6.4 npp-14 4889 7.613 0.906 0.955 0.956 0.955 0.955 0.969 0.970 0.947 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
4. F28B3.7 him-1 18274 7.609 0.974 0.954 0.964 0.954 0.905 0.954 0.955 0.949 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
5. Y37A1B.1 lst-3 10739 7.608 0.957 0.950 0.942 0.950 0.955 0.967 0.960 0.927 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
6. F36F2.3 rbpl-1 15376 7.603 0.940 0.954 0.970 0.954 0.957 0.956 0.963 0.909 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
7. D2089.1 rsp-7 11057 7.599 0.918 0.950 0.968 0.950 0.954 0.962 0.947 0.950 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
8. F37E3.1 ncbp-1 5649 7.593 0.938 0.948 0.943 0.948 0.970 0.970 0.965 0.911 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
9. E01A2.4 let-504 9788 7.581 0.936 0.958 0.968 0.958 0.905 0.954 0.963 0.939
10. B0041.7 xnp-1 9187 7.58 0.948 0.944 0.949 0.944 0.952 0.976 0.959 0.908 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
11. Y61A9LA.8 sut-2 11388 7.577 0.927 0.946 0.949 0.946 0.940 0.961 0.982 0.926 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
12. Y46G5A.4 snrp-200 13827 7.573 0.955 0.950 0.945 0.950 0.910 0.946 0.972 0.945 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
13. C43E11.1 acin-1 7781 7.572 0.939 0.961 0.943 0.961 0.938 0.960 0.955 0.915 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
14. F10C2.2 kup-1 3852 7.572 0.919 0.957 0.959 0.957 0.935 0.930 0.965 0.950
15. F52C9.8 pqe-1 7546 7.57 0.957 0.958 0.957 0.958 0.959 0.940 0.963 0.878 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
16. EEED8.5 mog-5 4698 7.57 0.938 0.949 0.950 0.949 0.938 0.930 0.959 0.957 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
17. F36A2.13 ubr-5 9047 7.569 0.955 0.945 0.972 0.945 0.954 0.967 0.924 0.907 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
18. C36B1.8 gls-1 8617 7.567 0.921 0.956 0.952 0.956 0.933 0.958 0.971 0.920 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
19. Y65B4BL.2 deps-1 18277 7.564 0.954 0.949 0.965 0.949 0.908 0.948 0.963 0.928
20. D1081.9 D1081.9 3792 7.562 0.924 0.967 0.963 0.967 0.946 0.917 0.933 0.945
21. ZK973.2 cec-10 7108 7.561 0.946 0.984 0.947 0.984 0.891 0.977 0.946 0.886 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
22. Y2H9A.1 mes-4 3566 7.555 0.939 0.935 0.964 0.935 0.937 0.950 0.953 0.942 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
23. W02D9.1 pri-2 6048 7.555 0.897 0.960 0.982 0.960 0.919 0.918 0.963 0.956 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
24. F46B6.3 smg-4 4959 7.555 0.930 0.942 0.935 0.942 0.949 0.959 0.966 0.932 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
25. T05E8.3 let-355 8169 7.552 0.925 0.948 0.956 0.948 0.936 0.958 0.951 0.930
26. C27B7.1 spr-2 14958 7.552 0.894 0.964 0.972 0.964 0.923 0.926 0.968 0.941 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
27. F41E6.4 smk-1 22394 7.55 0.966 0.970 0.965 0.970 0.934 0.936 0.928 0.881 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
28. C17E4.10 C17E4.10 7034 7.55 0.917 0.941 0.974 0.941 0.948 0.966 0.971 0.892
29. F36A2.1 cids-2 4551 7.55 0.904 0.967 0.952 0.967 0.945 0.957 0.960 0.898 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
30. K04C2.4 brd-1 2439 7.55 0.893 0.964 0.955 0.964 0.917 0.953 0.961 0.943 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
31. T17E9.1 kin-18 8172 7.549 0.919 0.956 0.966 0.956 0.956 0.927 0.943 0.926 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
32. B0464.2 ctr-9 7610 7.548 0.943 0.966 0.959 0.966 0.884 0.961 0.946 0.923 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
33. F22D6.5 prpf-4 9522 7.547 0.959 0.964 0.949 0.964 0.883 0.950 0.942 0.936 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
34. T04A8.14 emb-5 11746 7.544 0.931 0.966 0.957 0.966 0.923 0.926 0.968 0.907 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
35. F35G12.8 smc-4 6202 7.543 0.940 0.972 0.969 0.972 0.945 0.926 0.901 0.918 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
36. M106.1 mix-1 7950 7.543 0.962 0.959 0.964 0.959 0.934 0.914 0.937 0.914 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
37. Y67H2A.6 csn-6 3098 7.54 0.884 0.956 0.935 0.956 0.956 0.956 0.972 0.925 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
38. B0025.2 csn-2 5205 7.539 0.902 0.961 0.954 0.961 0.916 0.958 0.957 0.930 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
39. C08B6.7 wdr-20 7575 7.535 0.919 0.969 0.945 0.969 0.936 0.962 0.930 0.905 WD repeat-containing protein 20 homolog [Source:UniProtKB/Swiss-Prot;Acc:D9N129]
40. F36F2.6 fcp-1 3946 7.535 0.963 0.961 0.936 0.961 0.923 0.921 0.949 0.921 FCP1 (yeast TFIIF-interacting CTD phosphatase subunit) homolog [Source:RefSeq peptide;Acc:NP_492423]
41. B0464.9 B0464.9 2997 7.535 0.899 0.974 0.947 0.974 0.925 0.930 0.968 0.918 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
42. M01E5.5 top-1 25458 7.534 0.946 0.960 0.969 0.960 0.936 0.938 0.935 0.890 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
43. F58B6.3 par-2 3914 7.532 0.895 0.959 0.944 0.959 0.952 0.951 0.936 0.936
44. C18G1.5 hil-4 21692 7.53 0.893 0.968 0.975 0.968 0.907 0.935 0.963 0.921 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
45. ZK1098.2 ZK1098.2 2172 7.529 0.948 0.918 0.974 0.918 0.939 0.958 0.945 0.929
46. T05F1.6 hsr-9 13312 7.529 0.928 0.967 0.948 0.967 0.937 0.910 0.944 0.928
47. Y43H11AL.3 pqn-85 2924 7.526 0.936 0.960 0.942 0.960 0.954 0.901 0.936 0.937 Nipped-B-like protein pqn-85 [Source:UniProtKB/Swiss-Prot;Acc:Q95XZ5]
48. F18E2.3 scc-3 13464 7.525 0.936 0.953 0.974 0.953 0.925 0.928 0.945 0.911 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
49. ZK686.4 snu-23 9040 7.525 0.904 0.953 0.979 0.953 0.925 0.961 0.940 0.910 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
50. F58D5.4 ksr-2 5973 7.525 0.903 0.959 0.950 0.959 0.937 0.963 0.964 0.890 Kinase suppressor of Ras B [Source:UniProtKB/Swiss-Prot;Acc:G5EDA5]
51. H27M09.1 sacy-1 3342 7.525 0.922 0.944 0.939 0.944 0.930 0.966 0.959 0.921 Suppressor of ACY-4 sterility [Source:RefSeq peptide;Acc:NP_491962]
52. Y38A8.3 ulp-2 7403 7.524 0.953 0.948 0.941 0.948 0.937 0.917 0.963 0.917 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
53. F56D2.6 ddx-15 12282 7.523 0.944 0.967 0.930 0.967 0.903 0.929 0.977 0.906 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
54. F36A4.7 ama-1 13620 7.523 0.929 0.939 0.951 0.939 0.951 0.958 0.952 0.904 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
55. T13F2.7 sna-2 4771 7.522 0.951 0.933 0.911 0.933 0.954 0.943 0.967 0.930 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
56. T07C4.10 T07C4.10 1563 7.521 0.896 0.932 0.961 0.932 0.944 0.950 0.957 0.949
57. K06H7.3 vms-1 4583 7.52 0.944 0.960 0.957 0.960 0.912 0.958 0.964 0.865
58. K08F11.5 miro-1 4512 7.519 0.943 0.951 0.975 0.951 0.918 0.966 0.962 0.853 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
59. K12D12.2 npp-3 6914 7.515 0.948 0.924 0.921 0.924 0.959 0.958 0.968 0.913 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
60. Y54E5A.4 npp-4 6288 7.515 0.889 0.978 0.944 0.978 0.895 0.957 0.944 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
61. T10F2.4 prp-19 11298 7.513 0.876 0.952 0.950 0.952 0.939 0.979 0.960 0.905 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
62. F55F8.4 cir-1 9437 7.512 0.952 0.931 0.961 0.931 0.909 0.951 0.949 0.928 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
63. F32A5.1 ada-2 8343 7.511 0.924 0.956 0.970 0.956 0.936 0.951 0.965 0.853 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
64. K02F2.3 teg-4 3873 7.51 0.919 0.952 0.956 0.952 0.937 0.932 0.958 0.904 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
65. ZK637.7 lin-9 5999 7.509 0.925 0.923 0.967 0.923 0.947 0.954 0.960 0.910
66. F43G9.10 mfap-1 9205 7.509 0.952 0.941 0.961 0.941 0.919 0.928 0.953 0.914 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
67. Y49E10.3 pph-4.2 8662 7.508 0.890 0.960 0.957 0.960 0.932 0.940 0.937 0.932 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
68. Y48G8AL.6 smg-2 12561 7.507 0.940 0.943 0.941 0.943 0.968 0.960 0.930 0.882 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
69. F56A3.3 npp-6 5425 7.506 0.907 0.952 0.958 0.952 0.920 0.921 0.953 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
70. F28D9.1 rsr-1 4282 7.506 0.940 0.962 0.947 0.962 0.943 0.933 0.942 0.877 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
71. C25H3.6 mdt-26 9423 7.504 0.912 0.962 0.969 0.962 0.940 0.963 0.904 0.892 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]
72. F25B5.2 nop-1 4127 7.504 0.920 0.950 0.971 0.950 0.930 0.928 0.972 0.883 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
73. Y34D9A.1 mrpl-38 5291 7.503 0.859 0.959 0.919 0.959 0.943 0.956 0.982 0.926 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
74. F10G8.3 rae-1 7542 7.5 0.888 0.965 0.946 0.965 0.930 0.962 0.965 0.879 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
75. Y47G6A.8 crn-1 3494 7.498 0.930 0.943 0.941 0.943 0.948 0.916 0.962 0.915 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
76. F01G4.3 skih-2 3353 7.498 0.917 0.958 0.943 0.958 0.922 0.929 0.963 0.908 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
77. Y56A3A.20 ccf-1 18463 7.497 0.861 0.959 0.929 0.959 0.974 0.950 0.918 0.947 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
78. Y105E8A.17 ekl-4 4732 7.497 0.898 0.973 0.935 0.973 0.927 0.925 0.944 0.922
79. Y18D10A.1 attf-6 6942 7.496 0.961 0.935 0.934 0.935 0.921 0.952 0.955 0.903 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
80. T08A11.2 T08A11.2 12269 7.496 0.929 0.954 0.955 0.954 0.960 0.941 0.934 0.869
81. F16D3.2 rsd-6 8211 7.496 0.899 0.976 0.977 0.976 0.929 0.921 0.928 0.890
82. R07G3.5 pgam-5 11646 7.495 0.851 0.960 0.956 0.960 0.954 0.961 0.933 0.920 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
83. T19B4.2 npp-7 13073 7.494 0.908 0.974 0.928 0.974 0.928 0.934 0.932 0.916 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
84. C05C8.6 hpo-9 8263 7.493 0.941 0.954 0.970 0.954 0.898 0.914 0.959 0.903
85. F32H2.4 thoc-3 3861 7.492 0.901 0.955 0.963 0.955 0.935 0.928 0.954 0.901 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
86. M04B2.2 M04B2.2 1191 7.491 0.960 0.903 0.943 0.903 0.938 0.975 0.945 0.924
87. C52E4.6 cyl-1 6405 7.491 0.890 0.958 0.968 0.958 0.931 0.951 0.958 0.877 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
88. K10C3.2 ensa-1 19836 7.49 0.861 0.975 0.960 0.975 0.923 0.934 0.931 0.931 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
89. F10B5.6 emb-27 2578 7.49 0.906 0.936 0.929 0.936 0.941 0.956 0.932 0.954 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
90. Y39A1B.3 dpy-28 4459 7.49 0.897 0.967 0.973 0.967 0.931 0.924 0.928 0.903 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
91. T12D8.2 drr-2 16208 7.49 0.883 0.942 0.919 0.942 0.959 0.965 0.961 0.919 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
92. T26A5.5 jhdm-1 12698 7.49 0.968 0.956 0.948 0.956 0.899 0.953 0.945 0.865 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
93. T05C12.6 mig-5 5242 7.49 0.845 0.953 0.952 0.953 0.940 0.955 0.965 0.927 Cytoplasmic signalling transducer; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC49]
94. R06A4.9 pfs-2 4733 7.489 0.885 0.967 0.944 0.967 0.930 0.923 0.954 0.919 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
95. F23F1.1 nfyc-1 9983 7.488 0.933 0.954 0.965 0.954 0.862 0.924 0.952 0.944 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
96. C28H8.9 dpff-1 8684 7.488 0.920 0.953 0.925 0.953 0.966 0.978 0.921 0.872 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
97. T10F2.3 ulp-1 8351 7.487 0.901 0.966 0.964 0.966 0.926 0.900 0.938 0.926 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
98. C18D11.4 rsp-8 18308 7.487 0.873 0.957 0.911 0.957 0.951 0.950 0.954 0.934 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
99. C05D11.3 txdc-9 4903 7.485 0.858 0.943 0.970 0.943 0.944 0.954 0.929 0.944 Thioredoxin domain-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q11183]
100. T21B10.4 T21B10.4 11648 7.485 0.910 0.960 0.969 0.960 0.914 0.968 0.969 0.835

There are 1935 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA