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Results for F52C9.8

Gene ID Gene Name Reads Transcripts Annotation
F52C9.8 pqe-1 7546 F52C9.8a, F52C9.8b, F52C9.8c, F52C9.8d.1, F52C9.8d.2, F52C9.8e, F52C9.8f, F52C9.8g Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]

Genes with expression patterns similar to F52C9.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F52C9.8 pqe-1 7546 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
2. F32A5.1 ada-2 8343 7.739 0.963 0.962 0.979 0.962 0.968 0.973 0.978 0.954 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
3. C02F4.1 ced-5 9096 7.718 0.965 0.982 0.977 0.982 0.976 0.951 0.934 0.951 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
4. F18E2.3 scc-3 13464 7.712 0.962 0.967 0.978 0.967 0.982 0.957 0.948 0.951 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
5. M01E5.5 top-1 25458 7.708 0.966 0.969 0.971 0.969 0.982 0.973 0.981 0.897 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
6. T17E9.1 kin-18 8172 7.707 0.956 0.967 0.972 0.967 0.979 0.968 0.962 0.936 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
7. F41E6.4 smk-1 22394 7.706 0.964 0.966 0.955 0.966 0.982 0.981 0.941 0.951 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
8. F16D3.2 rsd-6 8211 7.703 0.942 0.971 0.972 0.971 0.982 0.982 0.960 0.923
9. Y55D9A.1 efa-6 10012 7.701 0.927 0.966 0.976 0.966 0.983 0.975 0.946 0.962 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
10. M106.1 mix-1 7950 7.699 0.959 0.974 0.962 0.974 0.983 0.946 0.970 0.931 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
11. F01G4.3 skih-2 3353 7.684 0.942 0.965 0.969 0.965 0.974 0.952 0.953 0.964 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
12. C36B1.8 gls-1 8617 7.684 0.955 0.962 0.970 0.962 0.963 0.954 0.975 0.943 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
13. C16A3.7 nfx-1 4680 7.682 0.970 0.976 0.973 0.976 0.965 0.956 0.908 0.958 Transcriptional repressor NF-X1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18034]
14. D1007.7 nrd-1 6738 7.682 0.969 0.960 0.987 0.960 0.973 0.985 0.908 0.940 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
15. F22D6.5 prpf-4 9522 7.681 0.947 0.965 0.966 0.965 0.938 0.965 0.974 0.961 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
16. F35G12.8 smc-4 6202 7.681 0.967 0.979 0.980 0.979 0.971 0.951 0.927 0.927 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
17. D2089.1 rsp-7 11057 7.673 0.952 0.976 0.971 0.976 0.982 0.975 0.940 0.901 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
18. F12F6.3 rib-1 10524 7.673 0.951 0.972 0.969 0.972 0.959 0.943 0.950 0.957 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
19. F36A2.13 ubr-5 9047 7.672 0.972 0.975 0.952 0.975 0.964 0.946 0.947 0.941 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
20. F36F2.3 rbpl-1 15376 7.669 0.905 0.971 0.956 0.971 0.967 0.979 0.974 0.946 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
21. T07D4.3 rha-1 5898 7.662 0.969 0.975 0.959 0.975 0.974 0.944 0.958 0.908 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
22. ZC404.9 gck-2 8382 7.661 0.937 0.988 0.957 0.988 0.983 0.970 0.950 0.888 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
23. W03F9.5 ttb-1 8682 7.661 0.930 0.984 0.971 0.984 0.974 0.977 0.929 0.912 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
24. C05C8.4 gei-6 6026 7.661 0.943 0.969 0.948 0.969 0.973 0.971 0.936 0.952 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
25. Y61A9LA.8 sut-2 11388 7.661 0.940 0.964 0.973 0.964 0.972 0.971 0.968 0.909 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
26. C07G1.4 wsp-1 11226 7.66 0.968 0.969 0.974 0.969 0.943 0.962 0.949 0.926 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
27. F48E8.6 disl-2 8774 7.657 0.943 0.958 0.951 0.958 0.972 0.981 0.944 0.950 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
28. F45E4.10 nrde-4 2741 7.657 0.951 0.978 0.972 0.978 0.951 0.974 0.906 0.947
29. K03H1.2 mog-1 4057 7.652 0.966 0.982 0.975 0.982 0.939 0.939 0.974 0.895 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
30. K01C8.10 cct-4 15077 7.652 0.946 0.967 0.948 0.967 0.974 0.976 0.940 0.934 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
31. Y39A1B.3 dpy-28 4459 7.651 0.940 0.965 0.966 0.965 0.965 0.971 0.938 0.941 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
32. T04A8.14 emb-5 11746 7.647 0.963 0.980 0.973 0.980 0.934 0.922 0.956 0.939 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
33. T23B12.4 natc-1 7759 7.643 0.951 0.963 0.971 0.963 0.986 0.966 0.941 0.902 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
34. R07G3.3 npp-21 3792 7.64 0.924 0.967 0.935 0.967 0.977 0.970 0.946 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
35. T05F1.6 hsr-9 13312 7.637 0.962 0.974 0.963 0.974 0.956 0.934 0.960 0.914
36. T20H4.4 adr-2 5495 7.636 0.957 0.962 0.954 0.962 0.981 0.976 0.933 0.911 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
37. D1022.7 aka-1 10681 7.635 0.936 0.973 0.977 0.973 0.972 0.966 0.916 0.922 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
38. K02F2.1 dpf-3 11465 7.634 0.959 0.966 0.971 0.966 0.989 0.982 0.905 0.896 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
39. T10F2.3 ulp-1 8351 7.632 0.934 0.962 0.974 0.962 0.974 0.961 0.936 0.929 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
40. C10C6.6 catp-8 8079 7.632 0.940 0.980 0.949 0.980 0.982 0.964 0.910 0.927 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
41. T08A11.2 T08A11.2 12269 7.63 0.934 0.965 0.971 0.965 0.971 0.942 0.935 0.947
42. F12F6.5 srgp-1 9048 7.63 0.925 0.974 0.969 0.974 0.948 0.962 0.940 0.938 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
43. F46B6.3 smg-4 4959 7.629 0.938 0.981 0.940 0.981 0.967 0.908 0.965 0.949 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
44. F36D4.3 hum-2 16493 7.629 0.953 0.956 0.963 0.956 0.947 0.958 0.943 0.953 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
45. VC5.4 mys-1 3996 7.628 0.934 0.960 0.958 0.960 0.981 0.946 0.952 0.937 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
46. T12E12.4 drp-1 7694 7.625 0.933 0.969 0.975 0.969 0.975 0.962 0.876 0.966 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
47. ZK858.1 gld-4 14162 7.623 0.935 0.944 0.971 0.944 0.962 0.966 0.961 0.940 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
48. K07C5.8 cash-1 10523 7.62 0.938 0.966 0.949 0.966 0.974 0.936 0.942 0.949 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
49. F28B3.7 him-1 18274 7.619 0.976 0.965 0.961 0.965 0.957 0.925 0.950 0.920 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
50. B0041.7 xnp-1 9187 7.619 0.947 0.958 0.941 0.958 0.958 0.929 0.985 0.943 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
51. F37E3.1 ncbp-1 5649 7.618 0.949 0.978 0.969 0.978 0.939 0.940 0.962 0.903 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
52. T01G9.4 npp-2 5361 7.616 0.936 0.976 0.960 0.976 0.979 0.932 0.912 0.945 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
53. C43E11.3 met-1 7581 7.616 0.957 0.980 0.947 0.980 0.943 0.952 0.955 0.902 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
54. F56A3.3 npp-6 5425 7.615 0.938 0.966 0.980 0.966 0.942 0.975 0.931 0.917 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
55. F25B5.2 nop-1 4127 7.608 0.962 0.974 0.970 0.974 0.949 0.903 0.963 0.913 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
56. C03D6.4 npp-14 4889 7.608 0.924 0.972 0.972 0.972 0.967 0.960 0.951 0.890 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
57. F38A5.13 dnj-11 19678 7.607 0.955 0.969 0.966 0.969 0.981 0.977 0.885 0.905 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
58. T01G1.3 sec-31 10504 7.606 0.940 0.973 0.955 0.973 0.962 0.965 0.907 0.931 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
59. C50C3.6 prp-8 19582 7.603 0.936 0.968 0.933 0.968 0.962 0.943 0.943 0.950 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
60. T06D8.6 cchl-1 26292 7.602 0.914 0.974 0.958 0.974 0.984 0.978 0.944 0.876 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
61. EEED8.7 rsp-4 13043 7.601 0.929 0.969 0.977 0.969 0.954 0.977 0.910 0.916 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
62. F19F10.12 F19F10.12 2474 7.6 0.936 0.963 0.980 0.963 0.958 0.928 0.913 0.959
63. C47D12.1 trr-1 4646 7.599 0.964 0.972 0.971 0.972 0.965 0.948 0.926 0.881 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
64. H38K22.1 evl-14 3704 7.599 0.934 0.978 0.956 0.978 0.943 0.957 0.952 0.901
65. E01A2.4 let-504 9788 7.599 0.949 0.971 0.961 0.971 0.934 0.936 0.947 0.930
66. K10B2.1 lin-23 15896 7.598 0.938 0.966 0.970 0.966 0.948 0.963 0.917 0.930 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
67. Y54F10AM.4 ceh-44 5910 7.597 0.947 0.970 0.962 0.970 0.962 0.968 0.936 0.882 Homeobox protein cut-like ceh-44 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL02]
68. ZK328.5 npp-10 7652 7.597 0.942 0.973 0.975 0.973 0.979 0.956 0.882 0.917 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
69. C13B4.2 usp-14 9000 7.594 0.951 0.961 0.973 0.961 0.984 0.962 0.873 0.929 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
70. ZC395.8 ztf-8 5521 7.594 0.939 0.957 0.963 0.957 0.983 0.948 0.931 0.916 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
71. C17E4.10 C17E4.10 7034 7.592 0.955 0.957 0.968 0.957 0.965 0.945 0.964 0.881
72. F58G11.1 letm-1 13414 7.592 0.932 0.975 0.957 0.975 0.964 0.963 0.915 0.911 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
73. F37A4.8 isw-1 9337 7.592 0.961 0.972 0.959 0.972 0.973 0.953 0.925 0.877 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
74. F56D1.4 clr-1 8615 7.59 0.891 0.972 0.954 0.972 0.980 0.963 0.912 0.946 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
75. Y73F8A.34 tag-349 7966 7.589 0.931 0.962 0.987 0.962 0.962 0.939 0.940 0.906
76. F28D9.1 rsr-1 4282 7.587 0.946 0.974 0.966 0.974 0.952 0.950 0.920 0.905 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
77. Y105E8A.17 ekl-4 4732 7.585 0.914 0.973 0.973 0.973 0.973 0.925 0.950 0.904
78. B0334.5 B0334.5 4713 7.584 0.923 0.971 0.972 0.971 0.973 0.986 0.897 0.891
79. Y56A3A.1 ntl-3 10450 7.584 0.929 0.970 0.943 0.970 0.963 0.980 0.891 0.938 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
80. Y48G8AL.6 smg-2 12561 7.584 0.931 0.955 0.947 0.955 0.985 0.976 0.907 0.928 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
81. R01H2.6 ubc-18 13394 7.584 0.893 0.969 0.968 0.969 0.962 0.970 0.941 0.912 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
82. F43G9.10 mfap-1 9205 7.583 0.932 0.952 0.933 0.952 0.967 0.939 0.973 0.935 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
83. Y111B2A.11 epc-1 8915 7.581 0.940 0.970 0.953 0.970 0.978 0.981 0.880 0.909 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
84. T24F1.2 samp-1 8422 7.581 0.931 0.944 0.963 0.944 0.978 0.962 0.930 0.929 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
85. Y81G3A.3 gcn-2 5831 7.58 0.931 0.954 0.975 0.954 0.975 0.970 0.941 0.880 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
86. Y17G7B.17 Y17G7B.17 11197 7.58 0.900 0.948 0.972 0.948 0.975 0.989 0.943 0.905
87. C26E6.5 fsn-1 6615 7.578 0.945 0.959 0.951 0.959 0.951 0.968 0.917 0.928 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
88. F55F8.4 cir-1 9437 7.578 0.948 0.952 0.952 0.952 0.930 0.928 0.969 0.947 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
89. T05C12.6 mig-5 5242 7.576 0.919 0.980 0.937 0.980 0.944 0.919 0.970 0.927 Cytoplasmic signalling transducer; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC49]
90. F11A10.1 lex-1 13720 7.574 0.958 0.968 0.980 0.968 0.964 0.946 0.917 0.873 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
91. C38D4.3 mel-28 3515 7.573 0.954 0.944 0.935 0.944 0.977 0.937 0.956 0.926
92. Y67H2A.6 csn-6 3098 7.572 0.892 0.955 0.964 0.955 0.976 0.926 0.967 0.937 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
93. F59B2.7 rab-6.1 10749 7.572 0.889 0.966 0.963 0.966 0.982 0.944 0.909 0.953 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
94. ZK1127.12 ZK1127.12 2029 7.572 0.925 0.942 0.944 0.942 0.960 0.986 0.913 0.960
95. F26E4.1 sur-6 16191 7.571 0.939 0.976 0.946 0.976 0.967 0.937 0.885 0.945 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
96. Y2H9A.1 mes-4 3566 7.57 0.969 0.961 0.933 0.961 0.966 0.932 0.969 0.879 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
97. H06O01.2 chd-1 7853 7.57 0.957 0.958 0.957 0.958 0.959 0.940 0.963 0.878 Chromodomain and Helicase Domain protein [Source:RefSeq peptide;Acc:NP_491994]
98. Y37A1B.1 lst-3 10739 7.569 0.950 0.963 0.951 0.963 0.940 0.902 0.952 0.948 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
99. K12D12.1 top-2 18694 7.568 0.962 0.969 0.966 0.969 0.972 0.962 0.882 0.886 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
100. K04C2.4 brd-1 2439 7.567 0.947 0.963 0.957 0.963 0.929 0.930 0.971 0.907 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA