C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y6D11A.1

Gene ID Gene Name Reads Transcripts Annotation
Y6D11A.1 exos-4.2 1983 Y6D11A.1 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_497279]

Genes with expression patterns similar to Y6D11A.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y6D11A.1 exos-4.2 1983 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_497279]
2. K01C8.10 cct-4 15077 7.532 0.955 0.934 0.895 0.934 0.972 0.967 0.939 0.936 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
3. D2089.1 rsp-7 11057 7.519 0.943 0.966 0.917 0.966 0.962 0.969 0.885 0.911 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
4. K02F2.1 dpf-3 11465 7.517 0.909 0.933 0.945 0.933 0.958 0.972 0.934 0.933 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
5. Y81G3A.3 gcn-2 5831 7.509 0.948 0.943 0.902 0.943 0.959 0.969 0.923 0.922 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
6. T01G1.3 sec-31 10504 7.507 0.925 0.964 0.946 0.964 0.936 0.962 0.934 0.876 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
7. Y56A3A.20 ccf-1 18463 7.498 0.932 0.951 0.951 0.951 0.949 0.944 0.901 0.919 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
8. C05C8.4 gei-6 6026 7.497 0.899 0.943 0.941 0.943 0.949 0.963 0.918 0.941 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
9. F58B6.3 par-2 3914 7.491 0.951 0.937 0.942 0.937 0.960 0.979 0.901 0.884
10. C29E4.2 kle-2 5527 7.482 0.923 0.936 0.968 0.936 0.954 0.959 0.889 0.917 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
11. F37E3.1 ncbp-1 5649 7.481 0.947 0.942 0.950 0.942 0.928 0.985 0.928 0.859 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
12. Y113G7B.23 swsn-1 13766 7.477 0.937 0.954 0.936 0.954 0.913 0.952 0.919 0.912 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
13. F48E8.6 disl-2 8774 7.475 0.932 0.949 0.925 0.949 0.956 0.953 0.886 0.925 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
14. K10D2.3 cid-1 7175 7.47 0.951 0.955 0.953 0.955 0.958 0.960 0.916 0.822 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
15. M106.1 mix-1 7950 7.465 0.901 0.959 0.933 0.959 0.951 0.957 0.881 0.924 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
16. T24D1.4 tag-179 3757 7.463 0.905 0.958 0.966 0.958 0.938 0.952 0.906 0.880
17. F01G4.3 skih-2 3353 7.461 0.906 0.950 0.941 0.950 0.945 0.983 0.892 0.894 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
18. Y54E10A.9 vbh-1 28746 7.453 0.961 0.945 0.860 0.945 0.920 0.985 0.949 0.888 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
19. C07G1.4 wsp-1 11226 7.452 0.940 0.952 0.935 0.952 0.910 0.930 0.919 0.914 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
20. Y48G8AL.6 smg-2 12561 7.451 0.948 0.959 0.859 0.959 0.960 0.978 0.903 0.885 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
21. Y38C1AA.2 csn-3 3451 7.45 0.949 0.957 0.939 0.957 0.928 0.968 0.845 0.907 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
22. Y67H2A.6 csn-6 3098 7.447 0.907 0.948 0.912 0.948 0.956 0.973 0.915 0.888 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
23. C36B1.8 gls-1 8617 7.443 0.938 0.931 0.943 0.931 0.926 0.968 0.893 0.913 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
24. Y55D9A.1 efa-6 10012 7.443 0.887 0.960 0.917 0.960 0.933 0.931 0.919 0.936 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
25. Y53C12A.4 mop-25.2 7481 7.443 0.934 0.953 0.957 0.953 0.934 0.968 0.859 0.885 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
26. F32A5.1 ada-2 8343 7.443 0.920 0.955 0.942 0.955 0.919 0.970 0.883 0.899 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
27. C28H8.9 dpff-1 8684 7.442 0.954 0.931 0.945 0.931 0.951 0.969 0.906 0.855 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
28. T05C3.5 dnj-19 20420 7.439 0.931 0.945 0.907 0.945 0.925 0.988 0.920 0.878 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
29. F22D6.3 nars-1 18624 7.438 0.929 0.961 0.878 0.961 0.940 0.944 0.939 0.886 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
30. F33D11.11 vpr-1 18001 7.438 0.912 0.925 0.953 0.925 0.939 0.944 0.918 0.922 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
31. D1054.14 prp-38 6504 7.437 0.960 0.955 0.935 0.955 0.954 0.946 0.840 0.892 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
32. C50C3.6 prp-8 19582 7.436 0.926 0.936 0.878 0.936 0.936 0.968 0.931 0.925 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
33. F36F2.3 rbpl-1 15376 7.435 0.910 0.942 0.869 0.942 0.962 0.969 0.904 0.937 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
34. Y38A8.2 pbs-3 18117 7.433 0.939 0.932 0.958 0.932 0.953 0.957 0.868 0.894 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
35. Y17G7B.17 Y17G7B.17 11197 7.433 0.935 0.938 0.954 0.938 0.922 0.961 0.908 0.877
36. Y105E8A.17 ekl-4 4732 7.432 0.955 0.957 0.930 0.957 0.952 0.974 0.835 0.872
37. C43E11.1 acin-1 7781 7.43 0.944 0.956 0.925 0.956 0.932 0.974 0.924 0.819 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
38. F52C9.8 pqe-1 7546 7.43 0.886 0.953 0.913 0.953 0.967 0.950 0.888 0.920 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
39. B0041.7 xnp-1 9187 7.43 0.908 0.930 0.924 0.930 0.917 0.972 0.895 0.954 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
40. Y47G6A.20 rnp-6 5542 7.429 0.942 0.947 0.885 0.947 0.966 0.966 0.879 0.897 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
41. M04B2.2 M04B2.2 1191 7.427 0.882 0.936 0.952 0.936 0.939 0.985 0.920 0.877
42. F55C5.8 srpa-68 6665 7.426 0.954 0.912 0.953 0.912 0.934 0.893 0.938 0.930 Probable signal recognition particle subunit SRP68 [Source:UniProtKB/Swiss-Prot;Acc:Q20822]
43. F28B3.7 him-1 18274 7.424 0.930 0.967 0.908 0.967 0.929 0.964 0.881 0.878 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
44. T17E9.1 kin-18 8172 7.423 0.903 0.926 0.934 0.926 0.970 0.957 0.932 0.875 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
45. F46F11.6 F46F11.6 7841 7.423 0.904 0.943 0.894 0.943 0.955 0.969 0.903 0.912
46. C02B10.5 C02B10.5 9171 7.422 0.948 0.955 0.951 0.955 0.901 0.933 0.880 0.899
47. T23B12.4 natc-1 7759 7.421 0.923 0.945 0.933 0.945 0.959 0.935 0.869 0.912 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
48. C18D11.4 rsp-8 18308 7.419 0.936 0.912 0.912 0.912 0.948 0.976 0.916 0.907 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
49. Y23H5A.7 cars-1 4455 7.419 0.964 0.936 0.910 0.936 0.930 0.909 0.904 0.930 Cysteinyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001293288]
50. F45E4.10 nrde-4 2741 7.417 0.925 0.950 0.943 0.950 0.929 0.935 0.868 0.917
51. C25H3.6 mdt-26 9423 7.417 0.893 0.904 0.936 0.904 0.961 0.984 0.925 0.910 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]
52. Y57G7A.10 emc-2 4837 7.417 0.925 0.923 0.941 0.923 0.951 0.962 0.896 0.896 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_001254028]
53. Y54H5A.3 tag-262 4269 7.416 0.933 0.978 0.958 0.978 0.892 0.938 0.869 0.870
54. T05H4.6 erfa-1 12542 7.415 0.935 0.954 0.891 0.954 0.928 0.944 0.883 0.926 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
55. F35G12.8 smc-4 6202 7.413 0.938 0.953 0.899 0.953 0.933 0.955 0.904 0.878 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
56. F56A8.6 cpf-2 2730 7.412 0.950 0.924 0.917 0.924 0.946 0.957 0.915 0.879 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
57. ZK1098.8 mut-7 4940 7.412 0.932 0.940 0.938 0.940 0.950 0.939 0.890 0.883 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
58. K03H1.2 mog-1 4057 7.41 0.919 0.952 0.917 0.952 0.921 0.968 0.911 0.870 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
59. T24F1.2 samp-1 8422 7.41 0.897 0.922 0.922 0.922 0.950 0.983 0.916 0.898 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
60. D1081.8 cdc-5L 8553 7.408 0.920 0.953 0.946 0.953 0.902 0.956 0.908 0.870 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
61. T05H10.2 apn-1 5628 7.408 0.924 0.960 0.939 0.960 0.941 0.947 0.879 0.858 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
62. F36D4.3 hum-2 16493 7.407 0.922 0.940 0.953 0.940 0.921 0.941 0.884 0.906 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
63. C02F4.1 ced-5 9096 7.406 0.870 0.951 0.941 0.951 0.933 0.902 0.902 0.956 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
64. T26A5.5 jhdm-1 12698 7.404 0.952 0.951 0.945 0.951 0.921 0.938 0.832 0.914 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
65. Y54E2A.2 smg-9 4494 7.401 0.928 0.927 0.952 0.927 0.909 0.948 0.903 0.907
66. Y61A9LA.8 sut-2 11388 7.4 0.953 0.924 0.880 0.924 0.945 0.978 0.889 0.907 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
67. Y111B2A.11 epc-1 8915 7.399 0.929 0.945 0.889 0.945 0.966 0.938 0.886 0.901 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
68. F44A2.1 tag-153 16535 7.396 0.959 0.949 0.957 0.949 0.905 0.951 0.856 0.870
69. T10F2.3 ulp-1 8351 7.395 0.939 0.951 0.901 0.951 0.938 0.939 0.844 0.932 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
70. F25D1.1 ppm-1 16992 7.395 0.924 0.957 0.914 0.957 0.927 0.943 0.865 0.908 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
71. C10C6.6 catp-8 8079 7.393 0.876 0.937 0.970 0.937 0.957 0.913 0.902 0.901 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
72. C08B11.6 arp-6 4646 7.393 0.954 0.924 0.870 0.924 0.941 0.967 0.912 0.901 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
73. C47D12.1 trr-1 4646 7.39 0.882 0.934 0.953 0.934 0.917 0.918 0.964 0.888 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
74. Y110A7A.13 chp-1 6714 7.389 0.946 0.905 0.916 0.905 0.960 0.968 0.909 0.880 CHORD Protein [Source:RefSeq peptide;Acc:NP_491519]
75. F28C6.6 suf-1 3642 7.389 0.897 0.960 0.907 0.960 0.892 0.943 0.898 0.932 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
76. C17E4.10 C17E4.10 7034 7.389 0.944 0.911 0.940 0.911 0.932 0.965 0.913 0.873
77. F54D5.8 dnj-13 18315 7.389 0.955 0.966 0.886 0.966 0.919 0.985 0.916 0.796 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_496468]
78. T05F1.6 hsr-9 13312 7.389 0.923 0.950 0.931 0.950 0.916 0.965 0.857 0.897
79. F22D6.5 prpf-4 9522 7.389 0.908 0.937 0.927 0.937 0.918 0.960 0.879 0.923 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
80. R02D3.5 fnta-1 5258 7.389 0.965 0.923 0.917 0.923 0.921 0.935 0.886 0.919 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
81. F56D1.4 clr-1 8615 7.388 0.815 0.920 0.955 0.920 0.959 0.977 0.918 0.924 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
82. T10F2.4 prp-19 11298 7.388 0.954 0.929 0.899 0.929 0.937 0.980 0.877 0.883 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
83. Y57A10A.18 pqn-87 31844 7.388 0.934 0.953 0.934 0.953 0.942 0.906 0.886 0.880 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
84. Y73B6BL.18 smg-3 2772 7.388 0.926 0.917 0.895 0.917 0.955 0.981 0.883 0.914 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_500974]
85. F46B6.3 smg-4 4959 7.387 0.934 0.950 0.893 0.950 0.939 0.963 0.838 0.920 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
86. F16D3.2 rsd-6 8211 7.384 0.902 0.938 0.913 0.938 0.956 0.947 0.906 0.884
87. K11D12.2 pqn-51 15951 7.383 0.954 0.960 0.939 0.960 0.933 0.942 0.804 0.891 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
88. Y71D11A.2 smr-1 4976 7.383 0.936 0.941 0.909 0.941 0.950 0.960 0.888 0.858 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
89. F36A2.13 ubr-5 9047 7.382 0.879 0.945 0.867 0.945 0.958 0.945 0.935 0.908 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
90. Y43C5A.6 rad-51 5327 7.382 0.935 0.934 0.944 0.934 0.952 0.941 0.906 0.836 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
91. C05C8.6 hpo-9 8263 7.38 0.928 0.967 0.946 0.967 0.926 0.923 0.856 0.867
92. C39E9.14 dli-1 5650 7.38 0.937 0.924 0.929 0.924 0.952 0.909 0.888 0.917 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
93. C18G1.4 pgl-3 5291 7.38 0.931 0.935 0.908 0.935 0.953 0.948 0.918 0.852 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
94. H19N07.1 erfa-3 19869 7.38 0.956 0.937 0.892 0.937 0.923 0.958 0.889 0.888 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
95. Y40B1B.5 eif-3.J 15061 7.38 0.950 0.940 0.883 0.940 0.940 0.947 0.877 0.903 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
96. F43G9.10 mfap-1 9205 7.379 0.907 0.936 0.889 0.936 0.950 0.954 0.888 0.919 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
97. Y116A8C.35 uaf-2 13808 7.378 0.958 0.937 0.898 0.937 0.951 0.958 0.895 0.844 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
98. C28H8.4 C28H8.4 16252 7.378 0.912 0.921 0.880 0.921 0.945 0.961 0.918 0.920 Putative ER lumen protein-retaining receptor C28H8.4 [Source:UniProtKB/Swiss-Prot;Acc:Q09473]
99. F39B2.10 dnj-12 35162 7.378 0.948 0.930 0.880 0.930 0.928 0.972 0.922 0.868 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
100. D1081.9 D1081.9 3792 7.376 0.913 0.939 0.941 0.939 0.967 0.969 0.875 0.833

There are 1028 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA