C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F12F6.3

Gene ID Gene Name Reads Transcripts Annotation
F12F6.3 rib-1 10524 F12F6.3a.1, F12F6.3a.2, F12F6.3b.1, F12F6.3b.2, F12F6.3b.3 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]

Genes with expression patterns similar to F12F6.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F12F6.3 rib-1 10524 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
2. F12F6.5 srgp-1 9048 7.923 0.989 0.997 0.996 0.997 0.983 0.991 0.985 0.985 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
3. F37A4.8 isw-1 9337 7.786 0.963 0.990 0.975 0.990 0.989 0.985 0.969 0.925 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
4. F18E2.3 scc-3 13464 7.77 0.961 0.978 0.978 0.978 0.980 0.953 0.971 0.971 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
5. Y55D9A.1 efa-6 10012 7.763 0.981 0.965 0.978 0.965 0.980 0.955 0.970 0.969 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
6. F16D3.2 rsd-6 8211 7.761 0.974 0.973 0.975 0.973 0.972 0.970 0.966 0.958
7. T17E9.1 kin-18 8172 7.761 0.974 0.977 0.989 0.977 0.947 0.970 0.978 0.949 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
8. W03F9.5 ttb-1 8682 7.76 0.945 0.982 0.987 0.982 0.980 0.977 0.951 0.956 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
9. T05F1.6 hsr-9 13312 7.756 0.943 0.981 0.974 0.981 0.979 0.975 0.954 0.969
10. M106.1 mix-1 7950 7.752 0.930 0.985 0.978 0.985 0.969 0.977 0.954 0.974 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
11. F11A10.1 lex-1 13720 7.751 0.986 0.978 0.983 0.978 0.987 0.975 0.959 0.905 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
12. C26E6.5 fsn-1 6615 7.75 0.969 0.988 0.984 0.988 0.950 0.956 0.956 0.959 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
13. D1022.7 aka-1 10681 7.745 0.982 0.984 0.987 0.984 0.981 0.964 0.961 0.902 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
14. F55G1.4 rod-1 1885 7.74 0.968 0.988 0.982 0.988 0.984 0.937 0.967 0.926 ROD (Drosophila RoughDeal) homolog [Source:RefSeq peptide;Acc:NP_501200]
15. F32A5.1 ada-2 8343 7.737 0.958 0.978 0.986 0.978 0.982 0.964 0.949 0.942 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
16. F35B12.5 sas-5 4606 7.733 0.986 0.964 0.979 0.964 0.974 0.957 0.961 0.948 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
17. EEED8.7 rsp-4 13043 7.732 0.961 0.981 0.971 0.981 0.984 0.975 0.950 0.929 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
18. C13B4.2 usp-14 9000 7.732 0.970 0.984 0.977 0.984 0.967 0.972 0.938 0.940 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
19. VC5.4 mys-1 3996 7.728 0.952 0.980 0.986 0.980 0.976 0.957 0.938 0.959 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
20. F41E6.4 smk-1 22394 7.724 0.934 0.980 0.968 0.980 0.983 0.962 0.953 0.964 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
21. C02F4.1 ced-5 9096 7.722 0.976 0.983 0.987 0.983 0.974 0.963 0.919 0.937 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
22. T23B12.4 natc-1 7759 7.72 0.961 0.968 0.971 0.968 0.971 0.976 0.971 0.934 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
23. C47D12.8 xpf-1 6173 7.72 0.946 0.975 0.971 0.975 0.967 0.983 0.959 0.944 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
24. ZK287.5 rbx-1 13546 7.718 0.954 0.993 0.980 0.993 0.965 0.976 0.943 0.914 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
25. R01H2.6 ubc-18 13394 7.716 0.910 0.989 0.956 0.989 0.991 0.987 0.967 0.927 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
26. F44A2.1 tag-153 16535 7.715 0.935 0.969 0.968 0.969 0.985 0.980 0.957 0.952
27. T20F5.7 T20F5.7 5210 7.713 0.981 0.965 0.986 0.965 0.987 0.960 0.937 0.932
28. K07C5.8 cash-1 10523 7.712 0.953 0.978 0.953 0.978 0.973 0.960 0.975 0.942 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
29. T06D10.2 chaf-1 8121 7.711 0.951 0.978 0.959 0.978 0.968 0.974 0.958 0.945 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
30. C12D8.10 akt-1 12100 7.708 0.979 0.972 0.993 0.972 0.960 0.976 0.913 0.943 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
31. K10B2.1 lin-23 15896 7.706 0.978 0.968 0.984 0.968 0.975 0.978 0.928 0.927 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
32. F35G12.8 smc-4 6202 7.705 0.946 0.972 0.970 0.972 0.975 0.928 0.962 0.980 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
33. C54G10.2 rfc-1 8814 7.703 0.957 0.984 0.972 0.984 0.963 0.977 0.934 0.932 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
34. T07F8.3 gld-3 9324 7.703 0.953 0.972 0.984 0.972 0.977 0.959 0.943 0.943 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
35. C09G9.6 oma-1 18743 7.702 0.972 0.948 0.971 0.948 0.982 0.965 0.964 0.952
36. M01E5.5 top-1 25458 7.702 0.925 0.990 0.962 0.990 0.980 0.976 0.941 0.938 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
37. C04A2.7 dnj-5 9618 7.701 0.981 0.975 0.974 0.975 0.935 0.964 0.974 0.923 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
38. ZK328.5 npp-10 7652 7.7 0.973 0.974 0.954 0.974 0.980 0.973 0.919 0.953 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
39. ZK1248.10 tbc-2 5875 7.698 0.970 0.983 0.981 0.983 0.954 0.967 0.922 0.938 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
40. F01G4.1 swsn-4 14710 7.697 0.979 0.972 0.991 0.972 0.966 0.948 0.949 0.920 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
41. CD4.6 pas-6 18332 7.695 0.933 0.981 0.948 0.981 0.981 0.983 0.937 0.951 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
42. C07G1.4 wsp-1 11226 7.694 0.937 0.982 0.979 0.982 0.954 0.946 0.961 0.953 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
43. ZC404.9 gck-2 8382 7.694 0.939 0.975 0.978 0.975 0.985 0.975 0.944 0.923 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
44. T10F2.3 ulp-1 8351 7.694 0.947 0.973 0.974 0.973 0.976 0.976 0.928 0.947 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
45. C14B9.4 plk-1 18785 7.693 0.939 0.983 0.982 0.983 0.980 0.956 0.912 0.958 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
46. W01B6.9 ndc-80 4670 7.692 0.939 0.971 0.978 0.971 0.965 0.966 0.935 0.967 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
47. K10B2.5 ani-2 11397 7.689 0.974 0.974 0.979 0.974 0.988 0.973 0.904 0.923 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
48. ZC395.8 ztf-8 5521 7.687 0.964 0.980 0.978 0.980 0.959 0.927 0.962 0.937 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
49. T07A9.6 daf-18 15998 7.687 0.958 0.944 0.953 0.944 0.972 0.984 0.968 0.964 DAF-18; DAF-18 protein; PTEN phosphatidylinositol 3' phosphatase homolog DAF-18; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE01]
50. F23B2.6 aly-2 7301 7.687 0.952 0.962 0.945 0.962 0.974 0.973 0.952 0.967 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
51. C25A1.5 C25A1.5 9135 7.685 0.932 0.974 0.962 0.974 0.983 0.968 0.944 0.948
52. C05C10.6 ufd-3 6304 7.683 0.979 0.980 0.982 0.980 0.955 0.955 0.933 0.919 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
53. C36B1.8 gls-1 8617 7.683 0.961 0.973 0.988 0.973 0.973 0.919 0.955 0.941 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
54. C29E4.2 kle-2 5527 7.682 0.950 0.979 0.976 0.979 0.974 0.938 0.925 0.961 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
55. T28F3.1 nra-1 7034 7.679 0.953 0.982 0.974 0.982 0.971 0.965 0.946 0.906 Nicotinic receptor-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB9]
56. C50A2.2 cec-2 4169 7.679 0.967 0.967 0.988 0.967 0.982 0.939 0.926 0.943 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
57. B0334.5 B0334.5 4713 7.678 0.964 0.967 0.981 0.967 0.974 0.951 0.942 0.932
58. R06C7.1 wago-1 4303 7.678 0.980 0.978 0.964 0.978 0.964 0.914 0.953 0.947 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
59. D1081.9 D1081.9 3792 7.677 0.928 0.972 0.976 0.972 0.965 0.972 0.961 0.931
60. T20H4.4 adr-2 5495 7.676 0.950 0.974 0.962 0.974 0.976 0.971 0.952 0.917 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
61. T01G9.4 npp-2 5361 7.675 0.940 0.973 0.961 0.973 0.976 0.933 0.943 0.976 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
62. F52B5.5 cep-1 2194 7.675 0.940 0.982 0.943 0.982 0.971 0.942 0.965 0.950 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
63. C10C6.6 catp-8 8079 7.674 0.977 0.974 0.974 0.974 0.971 0.947 0.933 0.924 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
64. F36D4.3 hum-2 16493 7.673 0.969 0.966 0.987 0.966 0.955 0.924 0.954 0.952 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
65. F52C9.8 pqe-1 7546 7.673 0.951 0.972 0.969 0.972 0.959 0.943 0.950 0.957 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
66. F46F11.10 F46F11.10 968 7.672 0.963 0.952 0.983 0.952 0.970 0.953 0.966 0.933
67. Y53H1A.5 nfya-2 4166 7.672 0.962 0.974 0.967 0.974 0.974 0.909 0.943 0.969 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
68. C02B10.2 snpn-1 5519 7.67 0.958 0.984 0.981 0.984 0.977 0.929 0.896 0.961 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
69. D1007.7 nrd-1 6738 7.669 0.965 0.966 0.976 0.966 0.969 0.964 0.909 0.954 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
70. ZK858.1 gld-4 14162 7.667 0.949 0.968 0.971 0.968 0.970 0.947 0.942 0.952 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
71. K12D12.1 top-2 18694 7.666 0.974 0.971 0.974 0.971 0.967 0.950 0.906 0.953 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
72. H06H21.6 ubxn-6 9202 7.665 0.956 0.967 0.974 0.967 0.968 0.971 0.941 0.921 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
73. C09G4.3 cks-1 17852 7.665 0.951 0.981 0.980 0.981 0.963 0.916 0.950 0.943 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
74. F58B6.3 par-2 3914 7.665 0.925 0.971 0.980 0.971 0.977 0.928 0.951 0.962
75. T10H9.3 syx-18 2416 7.664 0.934 0.966 0.971 0.966 0.977 0.982 0.932 0.936 SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
76. T21E12.4 dhc-1 20370 7.66 0.945 0.976 0.955 0.976 0.988 0.973 0.904 0.943 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
77. Y105E8A.17 ekl-4 4732 7.659 0.947 0.978 0.974 0.978 0.956 0.939 0.940 0.947
78. Y73F8A.34 tag-349 7966 7.659 0.960 0.967 0.984 0.967 0.952 0.930 0.940 0.959
79. R119.4 pqn-59 16065 7.656 0.932 0.976 0.983 0.976 0.970 0.914 0.935 0.970 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
80. Y54G9A.6 bub-3 9123 7.654 0.918 0.990 0.966 0.990 0.977 0.971 0.908 0.934 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
81. F39H11.5 pbs-7 13631 7.654 0.897 0.989 0.969 0.989 0.983 0.962 0.914 0.951 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
82. C16C10.3 hrde-1 14922 7.651 0.958 0.984 0.982 0.984 0.953 0.898 0.938 0.954 Heritable RNAi Deficient [Source:RefSeq peptide;Acc:NP_497834]
83. F38A5.13 dnj-11 19678 7.65 0.889 0.979 0.972 0.979 0.984 0.978 0.909 0.960 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
84. F01G4.3 skih-2 3353 7.649 0.945 0.961 0.963 0.961 0.950 0.959 0.934 0.976 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
85. C03B8.4 lin-13 7489 7.648 0.925 0.967 0.986 0.967 0.964 0.988 0.937 0.914 Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
86. T10C6.4 srx-44 8454 7.648 0.915 0.986 0.977 0.986 0.975 0.906 0.953 0.950 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
87. F55B12.3 sel-10 10304 7.647 0.926 0.980 0.953 0.980 0.970 0.966 0.925 0.947 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
88. K08D12.1 pbs-1 21677 7.647 0.924 0.988 0.964 0.988 0.979 0.961 0.910 0.933 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
89. C05C8.4 gei-6 6026 7.647 0.942 0.965 0.981 0.965 0.947 0.971 0.913 0.963 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
90. B0205.1 B0205.1 2403 7.647 0.943 0.965 0.966 0.965 0.949 0.966 0.921 0.972
91. Y17G7B.17 Y17G7B.17 11197 7.645 0.952 0.968 0.987 0.968 0.964 0.962 0.950 0.894
92. C56C10.1 vps-33.2 2038 7.645 0.957 0.962 0.953 0.962 0.975 0.977 0.942 0.917 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
93. C47D12.1 trr-1 4646 7.645 0.956 0.981 0.984 0.981 0.968 0.916 0.934 0.925 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
94. T12D8.3 acbp-5 6816 7.644 0.928 0.986 0.971 0.986 0.953 0.936 0.917 0.967 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
95. T12E12.1 T12E12.1 7629 7.643 0.941 0.972 0.986 0.972 0.945 0.926 0.946 0.955 Probable protein ariadne-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22431]
96. F56A3.3 npp-6 5425 7.643 0.944 0.956 0.966 0.956 0.969 0.966 0.928 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
97. F56D1.4 clr-1 8615 7.642 0.960 0.988 0.989 0.988 0.961 0.924 0.919 0.913 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
98. Y49E10.3 pph-4.2 8662 7.642 0.976 0.976 0.980 0.976 0.977 0.874 0.936 0.947 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
99. W05B10.1 his-74 21926 7.642 0.910 0.979 0.950 0.979 0.989 0.971 0.965 0.899 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
100. T05G5.3 cdk-1 14112 7.642 0.949 0.980 0.980 0.980 0.965 0.984 0.883 0.921 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]

There are 3010 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA