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Results for Y71F9B.10

Gene ID Gene Name Reads Transcripts Annotation
Y71F9B.10 sop-3 2169 Y71F9B.10a, Y71F9B.10b, Y71F9B.10c, Y71F9B.10d, Y71F9B.10e, Y71F9B.10f Mediator of RNA polymerase II transcription subunit 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G4]

Genes with expression patterns similar to Y71F9B.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y71F9B.10 sop-3 2169 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mediator of RNA polymerase II transcription subunit 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G4]
2. F21H12.1 rbbp-5 1682 7.443 0.923 0.934 0.932 0.934 0.970 0.924 0.912 0.914 Retinoblastoma-binding protein homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09309]
3. K01G5.4 ran-1 32379 7.432 0.926 0.945 0.913 0.945 0.971 0.944 0.936 0.852 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
4. M01D7.6 emr-1 4358 7.431 0.954 0.958 0.893 0.958 0.962 0.928 0.888 0.890 Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
5. W02F12.6 sna-1 7338 7.428 0.907 0.942 0.893 0.942 0.970 0.964 0.927 0.883 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
6. Y40B1B.5 eif-3.J 15061 7.424 0.929 0.944 0.904 0.944 0.971 0.940 0.890 0.902 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
7. Y23H5B.6 Y23H5B.6 5886 7.422 0.914 0.950 0.902 0.950 0.939 0.956 0.934 0.877
8. C02B10.5 C02B10.5 9171 7.411 0.903 0.948 0.919 0.948 0.972 0.950 0.928 0.843
9. F21C3.4 rde-2 6286 7.407 0.906 0.956 0.912 0.956 0.909 0.942 0.928 0.898
10. F26F4.10 rars-1 9971 7.401 0.943 0.900 0.912 0.900 0.978 0.951 0.909 0.908 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
11. C25D7.8 otub-1 7941 7.401 0.918 0.952 0.899 0.952 0.965 0.951 0.901 0.863 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
12. C26E6.4 rpb-2 7053 7.398 0.945 0.941 0.914 0.941 0.960 0.940 0.892 0.865 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
13. F10E9.7 F10E9.7 1842 7.395 0.941 0.925 0.912 0.925 0.963 0.936 0.921 0.872
14. F32H2.1 snpc-4 7581 7.392 0.934 0.915 0.900 0.915 0.958 0.948 0.932 0.890 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
15. T23B5.1 prmt-3 10677 7.388 0.945 0.936 0.915 0.936 0.959 0.918 0.889 0.890 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
16. T23H2.1 npp-12 12425 7.388 0.956 0.936 0.911 0.936 0.952 0.936 0.921 0.840 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
17. C53D5.6 imb-3 28921 7.388 0.927 0.938 0.899 0.938 0.971 0.933 0.907 0.875 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
18. ZK652.1 snr-5 5993 7.387 0.858 0.922 0.916 0.922 0.971 0.936 0.956 0.906 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
19. T10C6.4 srx-44 8454 7.384 0.891 0.939 0.943 0.939 0.965 0.924 0.884 0.899 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
20. T19B4.2 npp-7 13073 7.381 0.932 0.931 0.907 0.931 0.963 0.925 0.913 0.879 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
21. K08F11.3 cif-1 10218 7.38 0.916 0.913 0.891 0.913 0.973 0.939 0.911 0.924 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
22. F56D2.6 ddx-15 12282 7.379 0.931 0.932 0.913 0.932 0.962 0.935 0.871 0.903 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
23. Y39G10AR.7 ekl-7 7072 7.379 0.919 0.923 0.930 0.923 0.969 0.920 0.954 0.841
24. F28B3.8 imb-1 7515 7.379 0.909 0.933 0.899 0.933 0.919 0.959 0.917 0.910 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
25. Y39G10AR.9 Y39G10AR.9 3972 7.378 0.908 0.931 0.874 0.931 0.971 0.927 0.915 0.921
26. Y110A7A.8 prp-31 4436 7.376 0.886 0.944 0.918 0.944 0.960 0.941 0.900 0.883 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
27. T11G6.1 hars-1 7908 7.374 0.921 0.951 0.876 0.951 0.960 0.931 0.893 0.891 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
28. T27F2.1 skp-1 3532 7.374 0.911 0.964 0.937 0.964 0.965 0.922 0.846 0.865 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
29. C34E10.5 prmt-5 12277 7.373 0.900 0.933 0.919 0.933 0.972 0.957 0.886 0.873 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
30. C48E7.3 lpd-2 10330 7.372 0.923 0.930 0.908 0.930 0.936 0.964 0.908 0.873 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
31. W01G7.3 rpb-11 7826 7.372 0.877 0.938 0.916 0.938 0.962 0.936 0.933 0.872 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
32. T12D8.3 acbp-5 6816 7.372 0.910 0.941 0.900 0.941 0.980 0.923 0.918 0.859 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
33. F45H11.3 hpo-35 8299 7.371 0.919 0.951 0.884 0.951 0.927 0.934 0.914 0.891
34. C15H11.4 dhs-22 21674 7.369 0.919 0.941 0.900 0.941 0.967 0.909 0.909 0.883 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
35. T28D9.10 snr-3 9995 7.368 0.919 0.958 0.856 0.958 0.927 0.932 0.941 0.877 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
36. T20G5.11 rde-4 3966 7.367 0.888 0.956 0.920 0.956 0.977 0.926 0.895 0.849 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
37. C43E11.1 acin-1 7781 7.367 0.940 0.938 0.896 0.938 0.966 0.940 0.866 0.883 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
38. ZK742.1 xpo-1 20741 7.366 0.910 0.921 0.920 0.921 0.964 0.918 0.908 0.904 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
39. C08B11.5 sap-49 10553 7.366 0.930 0.922 0.882 0.922 0.979 0.933 0.923 0.875 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
40. K11D12.2 pqn-51 15951 7.365 0.903 0.935 0.895 0.935 0.971 0.951 0.903 0.872 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
41. C48B4.11 C48B4.11 4384 7.364 0.926 0.931 0.902 0.931 0.971 0.906 0.934 0.863
42. C52E4.6 cyl-1 6405 7.362 0.937 0.934 0.919 0.934 0.970 0.940 0.884 0.844 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
43. Y17G7A.1 hmg-12 29989 7.362 0.931 0.962 0.922 0.962 0.965 0.914 0.918 0.788 HMG [Source:RefSeq peptide;Acc:NP_496544]
44. Y46G5A.4 snrp-200 13827 7.36 0.898 0.932 0.931 0.932 0.966 0.952 0.891 0.858 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
45. B0035.3 B0035.3 4118 7.358 0.929 0.935 0.944 0.935 0.957 0.933 0.892 0.833
46. F56F3.1 ifet-1 25772 7.357 0.857 0.945 0.912 0.945 0.958 0.923 0.933 0.884 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
47. B0025.2 csn-2 5205 7.356 0.922 0.929 0.931 0.929 0.954 0.910 0.903 0.878 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
48. F23F1.1 nfyc-1 9983 7.354 0.946 0.939 0.913 0.939 0.925 0.950 0.914 0.828 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
49. K08E3.8 mdt-29 4678 7.354 0.894 0.941 0.916 0.941 0.969 0.943 0.894 0.856 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
50. T10F2.4 prp-19 11298 7.353 0.909 0.927 0.918 0.927 0.969 0.909 0.890 0.904 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
51. F42A6.7 hrp-1 28201 7.352 0.925 0.897 0.896 0.897 0.963 0.951 0.922 0.901 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
52. Y111B2A.18 rsp-3 43731 7.35 0.936 0.907 0.905 0.907 0.970 0.938 0.899 0.888 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
53. D2030.6 prg-1 26751 7.349 0.914 0.935 0.918 0.935 0.972 0.945 0.931 0.799 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
54. Y34D9A.1 mrpl-38 5291 7.348 0.936 0.922 0.900 0.922 0.976 0.944 0.894 0.854 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
55. F28H1.3 aars-2 13537 7.346 0.948 0.916 0.882 0.916 0.965 0.920 0.915 0.884 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
56. DY3.1 tin-13 5225 7.344 0.902 0.952 0.842 0.952 0.955 0.937 0.902 0.902 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
57. ZK616.6 perm-3 16186 7.343 0.898 0.933 0.910 0.933 0.987 0.953 0.898 0.831 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
58. K01G5.8 K01G5.8 4694 7.342 0.921 0.951 0.892 0.951 0.931 0.918 0.902 0.876
59. T26A5.7 set-1 6948 7.341 0.882 0.909 0.914 0.909 0.960 0.950 0.916 0.901 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
60. C05D11.10 mrps-17 4613 7.339 0.849 0.952 0.865 0.952 0.970 0.913 0.943 0.895 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
61. F46A9.4 skr-2 16831 7.338 0.935 0.930 0.904 0.930 0.970 0.930 0.907 0.832 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
62. F22D6.3 nars-1 18624 7.337 0.919 0.958 0.883 0.958 0.980 0.940 0.869 0.830 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
63. Y37E3.3 rpb-10 4051 7.335 0.932 0.935 0.861 0.935 0.920 0.921 0.951 0.880 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
64. T05H4.6 erfa-1 12542 7.335 0.893 0.934 0.896 0.934 0.980 0.926 0.909 0.863 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
65. E01A2.4 let-504 9788 7.334 0.891 0.947 0.942 0.947 0.968 0.935 0.868 0.836
66. Y54E5A.6 Y54E5A.6 770 7.333 0.879 0.921 0.908 0.921 0.953 0.935 0.935 0.881
67. F32H2.4 thoc-3 3861 7.333 0.879 0.938 0.919 0.938 0.967 0.922 0.895 0.875 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
68. Y65B4BR.5 icd-2 58321 7.333 0.878 0.947 0.865 0.947 0.958 0.944 0.896 0.898 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
69. Y48G8AL.6 smg-2 12561 7.332 0.927 0.950 0.920 0.950 0.926 0.941 0.835 0.883 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
70. F53F10.5 npp-11 3378 7.33 0.893 0.950 0.868 0.950 0.964 0.918 0.923 0.864 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
71. ZK381.4 pgl-1 20651 7.33 0.949 0.964 0.919 0.964 0.945 0.900 0.874 0.815 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
72. ZK1251.9 dcaf-1 10926 7.33 0.933 0.953 0.913 0.953 0.919 0.932 0.898 0.829 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
73. W02B12.3 rsp-1 9235 7.328 0.927 0.939 0.921 0.939 0.963 0.932 0.870 0.837 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
74. F56D1.7 daz-1 23684 7.327 0.909 0.926 0.921 0.926 0.969 0.935 0.874 0.867 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
75. ZK686.4 snu-23 9040 7.323 0.919 0.925 0.904 0.925 0.953 0.932 0.875 0.890 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
76. C50C3.6 prp-8 19582 7.322 0.950 0.934 0.918 0.934 0.977 0.926 0.805 0.878 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
77. C14C10.4 mma-1 3306 7.322 0.874 0.960 0.909 0.960 0.953 0.934 0.917 0.815
78. R09B3.5 mag-1 7496 7.322 0.942 0.889 0.908 0.889 0.915 0.950 0.931 0.898 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
79. C43H8.2 mafr-1 5790 7.321 0.896 0.926 0.898 0.926 0.956 0.928 0.901 0.890 Repressor of RNA polymerase III transcription MAF1 [Source:RefSeq peptide;Acc:NP_492777]
80. R12C12.2 ran-5 14517 7.321 0.907 0.919 0.941 0.919 0.960 0.919 0.917 0.839 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
81. Y54E5A.4 npp-4 6288 7.32 0.893 0.924 0.889 0.924 0.969 0.924 0.919 0.878 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
82. D2013.7 eif-3.F 21004 7.32 0.917 0.914 0.840 0.914 0.973 0.931 0.917 0.914 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
83. ZK856.12 hpo-40 7855 7.32 0.903 0.933 0.923 0.933 0.969 0.914 0.934 0.811
84. R144.7 larp-1 24669 7.319 0.895 0.918 0.873 0.918 0.954 0.961 0.890 0.910 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
85. B0205.11 mrpl-9 9162 7.317 0.874 0.946 0.901 0.946 0.959 0.890 0.937 0.864 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
86. T04A8.14 emb-5 11746 7.316 0.938 0.942 0.918 0.942 0.977 0.960 0.822 0.817 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
87. D2030.8 D2030.8 2645 7.316 0.874 0.922 0.936 0.922 0.962 0.937 0.895 0.868
88. B0511.8 mrps-30 5050 7.316 0.886 0.929 0.904 0.929 0.956 0.934 0.925 0.853 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
89. Y37E3.15 npp-13 7250 7.315 0.937 0.929 0.870 0.929 0.951 0.915 0.905 0.879 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
90. T06A10.4 lsy-13 7631 7.314 0.912 0.929 0.935 0.929 0.968 0.922 0.929 0.790
91. Y113G7B.23 swsn-1 13766 7.312 0.922 0.951 0.900 0.951 0.958 0.926 0.817 0.887 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
92. T26A5.5 jhdm-1 12698 7.312 0.921 0.939 0.902 0.939 0.968 0.957 0.860 0.826 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
93. C41C4.6 ulp-4 13338 7.312 0.951 0.936 0.936 0.936 0.870 0.940 0.893 0.850 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
94. B0261.4 mrpl-47 8210 7.311 0.884 0.921 0.881 0.921 0.966 0.933 0.918 0.887 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
95. C07H6.5 cgh-1 60576 7.311 0.877 0.953 0.918 0.953 0.867 0.934 0.932 0.877 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
96. W04D2.5 mrps-11 5757 7.31 0.903 0.944 0.914 0.944 0.959 0.897 0.902 0.847 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
97. C26B2.6 elpc-4 3600 7.309 0.831 0.963 0.884 0.963 0.950 0.896 0.956 0.866 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
98. F28C6.6 suf-1 3642 7.308 0.919 0.949 0.860 0.949 0.955 0.952 0.892 0.832 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
99. K01G5.1 rnf-113 4336 7.308 0.863 0.960 0.917 0.960 0.917 0.944 0.920 0.827 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
100. Y37D8A.11 cec-7 8801 7.307 0.910 0.956 0.900 0.956 0.945 0.921 0.933 0.786 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA