C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y49F6B.4

Gene ID Gene Name Reads Transcripts Annotation
Y49F6B.4 smu-2 4164 Y49F6B.4 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]

Genes with expression patterns similar to Y49F6B.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y49F6B.4 smu-2 4164 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
2. E01A2.4 let-504 9788 7.696 0.954 0.977 0.953 0.977 0.953 0.985 0.961 0.936
3. T01G9.4 npp-2 5361 7.653 0.925 0.973 0.970 0.973 0.930 0.976 0.948 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
4. W03F9.5 ttb-1 8682 7.651 0.962 0.975 0.958 0.975 0.927 0.948 0.977 0.929 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
5. F23F1.1 nfyc-1 9983 7.65 0.978 0.964 0.964 0.964 0.958 0.931 0.930 0.961 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
6. Y61A9LA.8 sut-2 11388 7.645 0.977 0.956 0.949 0.956 0.949 0.959 0.929 0.970 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
7. F28B3.7 him-1 18274 7.643 0.967 0.957 0.971 0.957 0.946 0.960 0.934 0.951 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
8. F10G8.3 rae-1 7542 7.639 0.948 0.972 0.937 0.972 0.944 0.968 0.924 0.974 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
9. F18E2.3 scc-3 13464 7.636 0.961 0.958 0.969 0.958 0.925 0.987 0.928 0.950 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
10. F56D1.7 daz-1 23684 7.635 0.951 0.950 0.957 0.950 0.924 0.982 0.962 0.959 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
11. T05F1.6 hsr-9 13312 7.635 0.974 0.968 0.957 0.968 0.910 0.964 0.962 0.932
12. F55F8.4 cir-1 9437 7.631 0.953 0.958 0.943 0.958 0.953 0.972 0.958 0.936 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
13. W01B6.9 ndc-80 4670 7.625 0.948 0.970 0.950 0.970 0.929 0.968 0.955 0.935 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
14. C48E7.3 lpd-2 10330 7.625 0.958 0.961 0.960 0.961 0.951 0.956 0.932 0.946 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
15. Y47G6A.20 rnp-6 5542 7.624 0.958 0.966 0.943 0.966 0.956 0.946 0.926 0.963 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
16. T10C6.4 srx-44 8454 7.619 0.952 0.974 0.975 0.974 0.910 0.947 0.917 0.970 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
17. Y105E8A.17 ekl-4 4732 7.619 0.942 0.960 0.943 0.960 0.961 0.957 0.937 0.959
18. R11A8.7 R11A8.7 15531 7.618 0.971 0.965 0.944 0.965 0.951 0.985 0.961 0.876 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
19. T04A8.14 emb-5 11746 7.614 0.952 0.979 0.962 0.979 0.915 0.950 0.911 0.966 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
20. Y110A7A.8 prp-31 4436 7.61 0.962 0.970 0.930 0.970 0.931 0.964 0.969 0.914 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
21. T20B12.2 tbp-1 9014 7.608 0.937 0.963 0.961 0.963 0.956 0.978 0.945 0.905 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
22. D2089.1 rsp-7 11057 7.606 0.965 0.974 0.958 0.974 0.899 0.953 0.920 0.963 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
23. F41E6.4 smk-1 22394 7.604 0.959 0.965 0.976 0.965 0.906 0.945 0.928 0.960 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
24. K06H7.3 vms-1 4583 7.604 0.949 0.970 0.941 0.970 0.917 0.955 0.952 0.950
25. T12E12.4 drp-1 7694 7.603 0.945 0.967 0.953 0.967 0.957 0.940 0.922 0.952 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
26. F46B6.3 smg-4 4959 7.602 0.955 0.957 0.946 0.957 0.947 0.927 0.959 0.954 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
27. Y47G6A.11 msh-6 2767 7.601 0.955 0.953 0.973 0.953 0.946 0.974 0.947 0.900 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491163]
28. F32E10.6 cec-5 10643 7.6 0.957 0.943 0.942 0.943 0.930 0.957 0.945 0.983 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
29. C43E11.1 acin-1 7781 7.599 0.965 0.966 0.931 0.966 0.941 0.971 0.924 0.935 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
30. T09A5.8 cec-3 5813 7.599 0.875 0.971 0.954 0.971 0.930 0.973 0.965 0.960 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
31. C18G1.5 hil-4 21692 7.597 0.938 0.963 0.967 0.963 0.919 0.955 0.946 0.946 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
32. K11D12.2 pqn-51 15951 7.596 0.968 0.976 0.937 0.976 0.943 0.938 0.897 0.961 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
33. R07G3.3 npp-21 3792 7.595 0.879 0.983 0.961 0.983 0.968 0.968 0.923 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
34. C34E10.5 prmt-5 12277 7.594 0.972 0.954 0.939 0.954 0.924 0.954 0.932 0.965 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
35. C09G4.3 cks-1 17852 7.594 0.947 0.957 0.946 0.957 0.940 0.930 0.952 0.965 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
36. Y73F8A.34 tag-349 7966 7.591 0.940 0.953 0.951 0.953 0.951 0.977 0.918 0.948
37. C53D5.6 imb-3 28921 7.589 0.940 0.960 0.924 0.960 0.941 0.959 0.948 0.957 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
38. C52E4.6 cyl-1 6405 7.589 0.945 0.971 0.958 0.971 0.925 0.944 0.918 0.957 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
39. C49C3.7 C49C3.7 3004 7.588 0.908 0.951 0.976 0.951 0.961 0.939 0.953 0.949
40. K07C5.8 cash-1 10523 7.583 0.963 0.958 0.945 0.958 0.924 0.947 0.959 0.929 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
41. F28D9.1 rsr-1 4282 7.583 0.949 0.972 0.929 0.972 0.904 0.953 0.953 0.951 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
42. K01G5.4 ran-1 32379 7.58 0.965 0.972 0.947 0.972 0.913 0.927 0.905 0.979 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
43. F42A6.7 hrp-1 28201 7.579 0.957 0.965 0.936 0.965 0.936 0.929 0.921 0.970 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
44. F31E3.3 rfc-4 3828 7.579 0.912 0.965 0.968 0.965 0.939 0.948 0.942 0.940 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
45. F37E3.1 ncbp-1 5649 7.578 0.963 0.965 0.957 0.965 0.908 0.942 0.924 0.954 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
46. Y48G8AL.6 smg-2 12561 7.577 0.973 0.947 0.939 0.947 0.938 0.954 0.916 0.963 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
47. Y71G12B.1 chaf-2 3451 7.576 0.945 0.953 0.941 0.953 0.923 0.944 0.966 0.951 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
48. F32H2.4 thoc-3 3861 7.576 0.953 0.956 0.968 0.956 0.945 0.926 0.917 0.955 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
49. T10F2.4 prp-19 11298 7.576 0.963 0.958 0.957 0.958 0.941 0.940 0.918 0.941 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
50. C32F10.5 hmg-3 5776 7.575 0.937 0.953 0.960 0.953 0.939 0.967 0.907 0.959 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
51. T20G5.11 rde-4 3966 7.574 0.950 0.950 0.966 0.950 0.902 0.980 0.937 0.939 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
52. Y54E5A.4 npp-4 6288 7.574 0.948 0.977 0.937 0.977 0.929 0.940 0.916 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
53. F32A5.1 ada-2 8343 7.573 0.921 0.973 0.965 0.973 0.929 0.963 0.926 0.923 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
54. Y46G5A.4 snrp-200 13827 7.573 0.950 0.947 0.951 0.947 0.944 0.935 0.934 0.965 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
55. W02B12.3 rsp-1 9235 7.572 0.967 0.971 0.954 0.971 0.900 0.914 0.923 0.972 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
56. T12D8.3 acbp-5 6816 7.569 0.924 0.964 0.963 0.964 0.902 0.960 0.940 0.952 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
57. F43G9.10 mfap-1 9205 7.567 0.936 0.942 0.967 0.942 0.937 0.986 0.934 0.923 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
58. F36F2.3 rbpl-1 15376 7.565 0.926 0.962 0.960 0.962 0.947 0.954 0.912 0.942 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
59. K03H1.2 mog-1 4057 7.565 0.945 0.962 0.933 0.962 0.964 0.957 0.922 0.920 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
60. M106.1 mix-1 7950 7.564 0.933 0.973 0.960 0.973 0.924 0.965 0.916 0.920 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
61. Y65B4BL.2 deps-1 18277 7.564 0.953 0.967 0.968 0.967 0.910 0.933 0.912 0.954
62. EEED8.7 rsp-4 13043 7.562 0.950 0.950 0.932 0.950 0.912 0.963 0.934 0.971 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
63. D1081.9 D1081.9 3792 7.562 0.929 0.960 0.952 0.960 0.940 0.967 0.950 0.904
64. Y71F9B.16 dnj-30 4262 7.56 0.947 0.937 0.946 0.937 0.933 0.954 0.936 0.970 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
65. R01H2.6 ubc-18 13394 7.559 0.933 0.975 0.956 0.975 0.876 0.962 0.932 0.950 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
66. W02D9.1 pri-2 6048 7.559 0.950 0.969 0.972 0.969 0.949 0.938 0.932 0.880 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
67. C39E9.13 rfc-3 9443 7.559 0.896 0.972 0.956 0.972 0.925 0.966 0.942 0.930 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
68. T20H4.4 adr-2 5495 7.558 0.932 0.958 0.963 0.958 0.909 0.965 0.904 0.969 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
69. Y48B6A.14 hmg-1.1 88723 7.558 0.938 0.963 0.947 0.963 0.904 0.968 0.938 0.937 HMG [Source:RefSeq peptide;Acc:NP_496970]
70. ZK686.4 snu-23 9040 7.557 0.971 0.966 0.962 0.966 0.931 0.941 0.899 0.921 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
71. Y111B2A.18 rsp-3 43731 7.557 0.959 0.965 0.947 0.965 0.928 0.899 0.916 0.978 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
72. T21D12.3 pqbp-1.1 5755 7.557 0.908 0.950 0.963 0.950 0.928 0.962 0.928 0.968 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
73. F16D3.2 rsd-6 8211 7.556 0.929 0.966 0.970 0.966 0.922 0.959 0.921 0.923
74. T19B4.2 npp-7 13073 7.555 0.970 0.965 0.926 0.965 0.939 0.928 0.918 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
75. Y116A8C.35 uaf-2 13808 7.553 0.959 0.974 0.933 0.974 0.911 0.930 0.903 0.969 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
76. C08B11.5 sap-49 10553 7.553 0.938 0.977 0.909 0.977 0.937 0.926 0.949 0.940 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
77. C02B10.2 snpn-1 5519 7.553 0.924 0.944 0.951 0.944 0.930 0.975 0.928 0.957 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
78. F43E2.2 rpb-4 2812 7.553 0.928 0.949 0.945 0.949 0.953 0.943 0.919 0.967 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]
79. F36D4.3 hum-2 16493 7.553 0.963 0.953 0.951 0.953 0.913 0.948 0.933 0.939 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
80. H27M09.3 syp-4 5331 7.551 0.963 0.956 0.942 0.956 0.945 0.965 0.928 0.896
81. F46A9.4 skr-2 16831 7.551 0.964 0.918 0.950 0.918 0.935 0.960 0.950 0.956 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
82. F36A2.1 cids-2 4551 7.551 0.953 0.963 0.937 0.963 0.928 0.943 0.921 0.943 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
83. F25B5.2 nop-1 4127 7.547 0.947 0.938 0.952 0.938 0.958 0.966 0.921 0.927 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
84. F45H11.3 hpo-35 8299 7.545 0.944 0.938 0.931 0.938 0.970 0.979 0.937 0.908
85. F38H4.7 tag-30 4315 7.545 0.950 0.964 0.911 0.964 0.898 0.965 0.949 0.944
86. F56A8.6 cpf-2 2730 7.545 0.975 0.937 0.948 0.937 0.948 0.955 0.922 0.923 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
87. B0205.1 B0205.1 2403 7.545 0.934 0.927 0.964 0.927 0.950 0.969 0.921 0.953
88. C39E9.12 C39E9.12 3588 7.544 0.941 0.940 0.974 0.940 0.934 0.962 0.927 0.926
89. C36B1.3 rpb-3 4442 7.544 0.904 0.976 0.960 0.976 0.928 0.936 0.897 0.967 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
90. C25D7.8 otub-1 7941 7.544 0.955 0.956 0.953 0.956 0.924 0.952 0.912 0.936 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
91. C26E6.5 fsn-1 6615 7.543 0.925 0.957 0.963 0.957 0.954 0.964 0.905 0.918 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
92. F52C9.7 mog-3 9880 7.543 0.940 0.979 0.963 0.979 0.939 0.939 0.922 0.882 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
93. C06E7.1 sams-3 26921 7.542 0.947 0.956 0.930 0.956 0.929 0.948 0.952 0.924 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
94. C36B1.8 gls-1 8617 7.542 0.948 0.933 0.943 0.933 0.933 0.965 0.950 0.937 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
95. C27B7.1 spr-2 14958 7.542 0.947 0.967 0.958 0.967 0.910 0.921 0.936 0.936 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
96. F10E9.8 sas-4 3703 7.542 0.958 0.956 0.954 0.956 0.958 0.946 0.911 0.903 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
97. Y39G10AL.3 cdk-7 3495 7.542 0.927 0.955 0.929 0.955 0.967 0.976 0.912 0.921 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
98. R13F6.10 cra-1 11610 7.542 0.947 0.949 0.892 0.949 0.945 0.940 0.954 0.966 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
99. Y71D11A.2 smr-1 4976 7.541 0.940 0.954 0.966 0.954 0.932 0.907 0.921 0.967 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
100. B0464.2 ctr-9 7610 7.541 0.923 0.969 0.960 0.969 0.929 0.932 0.920 0.939 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]

There are 2089 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA