C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y47G6A.11

Gene ID Gene Name Reads Transcripts Annotation
Y47G6A.11 msh-6 2767 Y47G6A.11 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491163]

Genes with expression patterns similar to Y47G6A.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y47G6A.11 msh-6 2767 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491163]
2. E01A2.4 let-504 9788 7.712 0.945 0.958 0.962 0.958 0.984 0.980 0.973 0.952
3. H27M09.3 syp-4 5331 7.672 0.946 0.967 0.960 0.967 0.971 0.963 0.931 0.967
4. F56D1.7 daz-1 23684 7.654 0.932 0.959 0.978 0.959 0.984 0.982 0.947 0.913 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
5. T26A5.5 jhdm-1 12698 7.637 0.959 0.962 0.972 0.962 0.979 0.975 0.921 0.907 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
6. D2030.6 prg-1 26751 7.636 0.928 0.951 0.969 0.951 0.977 0.971 0.929 0.960 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
7. F28B3.7 him-1 18274 7.631 0.971 0.954 0.981 0.954 0.978 0.954 0.902 0.937 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
8. Y17G7A.1 hmg-12 29989 7.625 0.956 0.979 0.970 0.979 0.945 0.920 0.901 0.975 HMG [Source:RefSeq peptide;Acc:NP_496544]
9. Y65B4BL.2 deps-1 18277 7.618 0.947 0.970 0.974 0.970 0.956 0.951 0.892 0.958
10. F23F1.1 nfyc-1 9983 7.613 0.955 0.958 0.976 0.958 0.953 0.945 0.920 0.948 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
11. F18C5.2 wrn-1 3792 7.608 0.938 0.953 0.971 0.953 0.948 0.984 0.930 0.931 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
12. F46B6.3 smg-4 4959 7.608 0.948 0.951 0.980 0.951 0.953 0.929 0.941 0.955 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
13. F32E10.6 cec-5 10643 7.601 0.948 0.944 0.962 0.944 0.977 0.973 0.927 0.926 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
14. T05F1.6 hsr-9 13312 7.601 0.959 0.963 0.975 0.963 0.956 0.946 0.918 0.921
15. Y49F6B.4 smu-2 4164 7.601 0.955 0.953 0.973 0.953 0.946 0.974 0.947 0.900 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
16. C25D7.8 otub-1 7941 7.593 0.935 0.968 0.978 0.968 0.964 0.915 0.940 0.925 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
17. F55G1.8 plk-3 12036 7.59 0.932 0.944 0.969 0.944 0.963 0.971 0.955 0.912 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
18. T05E8.3 let-355 8169 7.588 0.921 0.958 0.971 0.958 0.950 0.956 0.952 0.922
19. C05C8.6 hpo-9 8263 7.587 0.962 0.941 0.966 0.941 0.938 0.917 0.940 0.982
20. Y38A8.3 ulp-2 7403 7.583 0.956 0.943 0.980 0.943 0.958 0.941 0.936 0.926 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
21. F25B5.2 nop-1 4127 7.583 0.947 0.927 0.954 0.927 0.976 0.976 0.902 0.974 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
22. F52C9.7 mog-3 9880 7.581 0.935 0.950 0.975 0.950 0.958 0.958 0.936 0.919 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
23. C08B11.6 arp-6 4646 7.581 0.924 0.965 0.951 0.965 0.962 0.966 0.891 0.957 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
24. ZK328.2 eftu-2 7040 7.579 0.962 0.963 0.977 0.963 0.933 0.965 0.928 0.888 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
25. R12C12.2 ran-5 14517 7.579 0.941 0.942 0.983 0.942 0.946 0.917 0.964 0.944 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
26. T20G5.11 rde-4 3966 7.578 0.944 0.928 0.982 0.928 0.963 0.976 0.918 0.939 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
27. R13F6.10 cra-1 11610 7.573 0.941 0.954 0.953 0.954 0.968 0.945 0.926 0.932 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
28. T04A8.14 emb-5 11746 7.572 0.955 0.966 0.972 0.966 0.963 0.921 0.891 0.938 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
29. Y37D8A.11 cec-7 8801 7.572 0.946 0.971 0.977 0.971 0.949 0.927 0.915 0.916 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
30. W02D9.1 pri-2 6048 7.571 0.959 0.944 0.971 0.944 0.972 0.962 0.913 0.906 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
31. B0464.2 ctr-9 7610 7.57 0.950 0.954 0.958 0.954 0.962 0.951 0.921 0.920 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
32. F56C9.6 F56C9.6 4303 7.569 0.940 0.963 0.966 0.963 0.918 0.920 0.932 0.967
33. Y46G5A.4 snrp-200 13827 7.566 0.931 0.942 0.975 0.942 0.968 0.952 0.928 0.928 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
34. F28C6.6 suf-1 3642 7.565 0.961 0.953 0.964 0.953 0.957 0.936 0.908 0.933 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
35. F36A2.1 cids-2 4551 7.562 0.933 0.947 0.968 0.947 0.952 0.934 0.914 0.967 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
36. K01G5.4 ran-1 32379 7.562 0.946 0.969 0.972 0.969 0.950 0.931 0.907 0.918 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
37. C27B7.1 spr-2 14958 7.562 0.928 0.954 0.968 0.954 0.952 0.922 0.933 0.951 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
38. T23H2.1 npp-12 12425 7.559 0.960 0.951 0.967 0.951 0.952 0.914 0.927 0.937 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
39. Y18D10A.1 attf-6 6942 7.558 0.938 0.952 0.964 0.952 0.950 0.973 0.906 0.923 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
40. F08B4.5 pole-2 8234 7.557 0.962 0.926 0.968 0.926 0.983 0.918 0.939 0.935 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
41. F32H2.4 thoc-3 3861 7.555 0.932 0.953 0.973 0.953 0.950 0.922 0.937 0.935 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
42. T28D9.2 rsp-5 6460 7.553 0.946 0.954 0.954 0.954 0.944 0.924 0.933 0.944 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
43. Y37A1B.1 lst-3 10739 7.553 0.943 0.953 0.977 0.953 0.946 0.943 0.917 0.921 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
44. F18E2.3 scc-3 13464 7.552 0.962 0.943 0.972 0.943 0.939 0.978 0.891 0.924 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
45. Y71G12B.9 lin-65 7476 7.551 0.949 0.958 0.980 0.958 0.955 0.938 0.937 0.876 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
46. T19B4.2 npp-7 13073 7.551 0.942 0.957 0.955 0.957 0.969 0.940 0.926 0.905 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
47. F10E9.8 sas-4 3703 7.549 0.947 0.927 0.948 0.927 0.949 0.954 0.952 0.945 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
48. C49C3.7 C49C3.7 3004 7.548 0.888 0.953 0.962 0.953 0.941 0.948 0.944 0.959
49. C53D5.6 imb-3 28921 7.547 0.913 0.961 0.967 0.961 0.963 0.957 0.926 0.899 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
50. ZK381.1 him-3 4913 7.547 0.908 0.957 0.957 0.957 0.957 0.940 0.914 0.957 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
51. Y53C12B.3 nos-3 20231 7.547 0.932 0.962 0.970 0.962 0.956 0.946 0.925 0.894 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
52. C08B11.2 hda-2 2313 7.546 0.967 0.958 0.949 0.958 0.915 0.936 0.939 0.924 Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
53. C18G1.5 hil-4 21692 7.546 0.933 0.938 0.969 0.938 0.965 0.971 0.933 0.899 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
54. Y56A3A.17 npp-16 5391 7.545 0.935 0.921 0.950 0.921 0.964 0.960 0.921 0.973 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
55. Y73F8A.34 tag-349 7966 7.545 0.931 0.949 0.960 0.949 0.958 0.970 0.900 0.928
56. W02B12.3 rsp-1 9235 7.545 0.938 0.969 0.975 0.969 0.939 0.931 0.894 0.930 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
57. Y54E5A.4 npp-4 6288 7.545 0.915 0.952 0.960 0.952 0.975 0.941 0.936 0.914 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
58. R119.4 pqn-59 16065 7.543 0.949 0.918 0.955 0.918 0.971 0.966 0.919 0.947 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
59. B0035.3 B0035.3 4118 7.543 0.943 0.941 0.967 0.941 0.958 0.916 0.928 0.949
60. C34E10.5 prmt-5 12277 7.542 0.924 0.959 0.974 0.959 0.961 0.961 0.935 0.869 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
61. Y110A7A.8 prp-31 4436 7.541 0.939 0.960 0.965 0.960 0.948 0.954 0.946 0.869 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
62. C14A4.4 crn-3 6558 7.539 0.921 0.958 0.949 0.958 0.924 0.956 0.939 0.934 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
63. Y37H2A.5 fbxa-210 2230 7.539 0.921 0.950 0.975 0.950 0.929 0.938 0.928 0.948 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
64. T01G9.4 npp-2 5361 7.535 0.947 0.938 0.975 0.938 0.947 0.961 0.902 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
65. Y80D3A.2 emb-4 3717 7.532 0.938 0.935 0.949 0.935 0.939 0.920 0.952 0.964
66. R11A8.7 R11A8.7 15531 7.53 0.949 0.943 0.952 0.943 0.975 0.983 0.928 0.857 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
67. K06H7.6 apc-2 2979 7.528 0.924 0.954 0.932 0.954 0.925 0.923 0.968 0.948 Anaphase-promoting complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34514]
68. Y47G6A.8 crn-1 3494 7.527 0.929 0.935 0.932 0.935 0.942 0.947 0.962 0.945 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
69. F45H11.3 hpo-35 8299 7.527 0.928 0.963 0.958 0.963 0.956 0.955 0.932 0.872
70. F55F8.4 cir-1 9437 7.527 0.951 0.930 0.950 0.930 0.982 0.960 0.944 0.880 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
71. W01B6.9 ndc-80 4670 7.526 0.943 0.949 0.951 0.949 0.953 0.949 0.915 0.917 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
72. C48E7.3 lpd-2 10330 7.522 0.908 0.947 0.974 0.947 0.974 0.932 0.941 0.899 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
73. W02F12.6 sna-1 7338 7.521 0.939 0.954 0.964 0.954 0.950 0.965 0.928 0.867 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
74. R05D3.11 met-2 3364 7.519 0.953 0.959 0.968 0.959 0.913 0.889 0.931 0.947 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
75. F09E8.3 msh-5 2136 7.515 0.919 0.973 0.912 0.973 0.911 0.926 0.939 0.962 MutS protein homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q19272]
76. Y71G12B.1 chaf-2 3451 7.513 0.936 0.966 0.935 0.966 0.944 0.940 0.930 0.896 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
77. D1081.8 cdc-5L 8553 7.512 0.920 0.954 0.959 0.954 0.953 0.922 0.871 0.979 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
78. Y41D4B.19 npp-8 12992 7.511 0.944 0.953 0.981 0.953 0.939 0.908 0.921 0.912 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
79. C06E7.1 sams-3 26921 7.509 0.931 0.971 0.982 0.971 0.950 0.960 0.902 0.842 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
80. T07D4.3 rha-1 5898 7.509 0.936 0.954 0.955 0.954 0.939 0.946 0.884 0.941 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
81. C33H5.15 sgo-1 3674 7.508 0.937 0.912 0.965 0.912 0.962 0.893 0.964 0.963 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
82. C36B1.8 gls-1 8617 7.508 0.953 0.924 0.961 0.924 0.963 0.932 0.931 0.920 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
83. F36F2.6 fcp-1 3946 7.508 0.904 0.928 0.971 0.928 0.958 0.968 0.893 0.958 FCP1 (yeast TFIIF-interacting CTD phosphatase subunit) homolog [Source:RefSeq peptide;Acc:NP_492423]
84. W03G1.6 pig-1 5015 7.507 0.918 0.932 0.964 0.932 0.960 0.964 0.900 0.937 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
85. B0252.4 cyn-10 3765 7.507 0.921 0.947 0.909 0.947 0.965 0.969 0.925 0.924 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
86. C38D4.3 mel-28 3515 7.507 0.928 0.952 0.942 0.952 0.961 0.971 0.879 0.922
87. T22A3.5 pash-1 3240 7.505 0.924 0.973 0.956 0.973 0.922 0.945 0.894 0.918 PArtner of DroSHa (DRSH-1 interactor) [Source:RefSeq peptide;Acc:NP_001293461]
88. H27M09.1 sacy-1 3342 7.504 0.936 0.922 0.954 0.922 0.945 0.947 0.913 0.965 Suppressor of ACY-4 sterility [Source:RefSeq peptide;Acc:NP_491962]
89. EEED8.5 mog-5 4698 7.504 0.876 0.943 0.978 0.943 0.958 0.975 0.909 0.922 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
90. C26E6.5 fsn-1 6615 7.503 0.924 0.919 0.953 0.919 0.974 0.945 0.902 0.967 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
91. F20C5.1 parg-1 2633 7.503 0.942 0.950 0.929 0.950 0.963 0.915 0.928 0.926 Poly(ADP-ribose) glycohydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q867X0]
92. C26E6.4 rpb-2 7053 7.503 0.928 0.970 0.955 0.970 0.958 0.928 0.916 0.878 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
93. F31E3.3 rfc-4 3828 7.503 0.921 0.931 0.966 0.931 0.939 0.961 0.945 0.909 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
94. B0035.11 leo-1 2968 7.502 0.903 0.927 0.953 0.927 0.938 0.972 0.940 0.942 RNA polymerase-associated protein LEO1 [Source:UniProtKB/Swiss-Prot;Acc:Q17431]
95. ZK507.6 cya-1 6807 7.502 0.926 0.942 0.927 0.942 0.916 0.931 0.928 0.990 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
96. C25A1.4 C25A1.4 15507 7.502 0.918 0.952 0.964 0.952 0.959 0.889 0.927 0.941
97. T12D8.3 acbp-5 6816 7.501 0.915 0.950 0.958 0.950 0.948 0.917 0.921 0.942 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
98. B0041.7 xnp-1 9187 7.501 0.953 0.964 0.953 0.964 0.934 0.908 0.906 0.919 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
99. F56D2.6 ddx-15 12282 7.501 0.942 0.941 0.963 0.941 0.961 0.931 0.921 0.901 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
100. K12C11.2 smo-1 12784 7.5 0.940 0.941 0.939 0.941 0.966 0.950 0.908 0.915 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]

There are 1829 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA