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Results for F55F8.4

Gene ID Gene Name Reads Transcripts Annotation
F55F8.4 cir-1 9437 F55F8.4.1, F55F8.4.2 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]

Genes with expression patterns similar to F55F8.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F55F8.4 cir-1 9437 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
2. E01A2.4 let-504 9788 7.77 0.968 0.975 0.947 0.975 0.997 0.982 0.965 0.961
3. F36F2.3 rbpl-1 15376 7.699 0.968 0.965 0.961 0.965 0.978 0.967 0.941 0.954 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
4. F22D6.5 prpf-4 9522 7.689 0.966 0.946 0.971 0.946 0.968 0.976 0.943 0.973 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
5. R11A8.7 R11A8.7 15531 7.68 0.975 0.961 0.960 0.961 0.957 0.967 0.956 0.943 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
6. F43G9.10 mfap-1 9205 7.671 0.968 0.943 0.962 0.943 0.946 0.979 0.955 0.975 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
7. M106.1 mix-1 7950 7.67 0.958 0.964 0.974 0.964 0.941 0.964 0.938 0.967 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
8. Y37A1B.1 lst-3 10739 7.661 0.952 0.966 0.947 0.966 0.968 0.980 0.934 0.948 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
9. M01E5.5 top-1 25458 7.658 0.968 0.962 0.959 0.962 0.931 0.968 0.950 0.958 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
10. R119.4 pqn-59 16065 7.656 0.970 0.934 0.956 0.934 0.970 0.977 0.960 0.955 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
11. F32A5.1 ada-2 8343 7.644 0.956 0.965 0.956 0.965 0.959 0.962 0.953 0.928 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
12. T26A5.5 jhdm-1 12698 7.642 0.983 0.952 0.968 0.952 0.993 0.963 0.922 0.909 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
13. Y46G5A.4 snrp-200 13827 7.641 0.968 0.958 0.952 0.958 0.985 0.954 0.931 0.935 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
14. B0041.7 xnp-1 9187 7.636 0.950 0.959 0.973 0.959 0.944 0.950 0.965 0.936 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
15. F19F10.11 F19F10.11 2683 7.635 0.946 0.955 0.958 0.955 0.963 0.970 0.966 0.922
16. F18E2.3 scc-3 13464 7.633 0.955 0.961 0.964 0.961 0.944 0.962 0.922 0.964 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
17. ZK328.2 eftu-2 7040 7.631 0.956 0.971 0.968 0.971 0.954 0.963 0.929 0.919 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
18. Y49F6B.4 smu-2 4164 7.631 0.953 0.958 0.943 0.958 0.953 0.972 0.958 0.936 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
19. Y61A9LA.8 sut-2 11388 7.627 0.966 0.942 0.947 0.942 0.980 0.969 0.933 0.948 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
20. F36A2.13 ubr-5 9047 7.623 0.952 0.958 0.956 0.958 0.981 0.975 0.896 0.947 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
21. F56D1.7 daz-1 23684 7.619 0.949 0.944 0.966 0.944 0.980 0.956 0.939 0.941 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
22. C16C10.6 ccdc-55 3581 7.618 0.970 0.946 0.951 0.946 0.967 0.959 0.941 0.938 Nuclear speckle splicing regulatory protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09252]
23. K03H1.2 mog-1 4057 7.615 0.964 0.958 0.969 0.958 0.966 0.965 0.933 0.902 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
24. C36B1.8 gls-1 8617 7.614 0.943 0.935 0.964 0.935 0.965 0.979 0.963 0.930 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
25. B0464.2 ctr-9 7610 7.609 0.949 0.948 0.955 0.948 0.975 0.960 0.932 0.942 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
26. C43E11.1 acin-1 7781 7.609 0.964 0.955 0.962 0.955 0.970 0.975 0.915 0.913 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
27. ZK686.4 snu-23 9040 7.608 0.928 0.966 0.957 0.966 0.981 0.964 0.922 0.924 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
28. F28B3.7 him-1 18274 7.606 0.965 0.946 0.957 0.946 0.982 0.958 0.916 0.936 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
29. T05F1.6 hsr-9 13312 7.604 0.941 0.956 0.957 0.956 0.961 0.938 0.942 0.953
30. F32E10.6 cec-5 10643 7.603 0.951 0.943 0.946 0.943 0.987 0.954 0.950 0.929 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
31. T04A8.14 emb-5 11746 7.601 0.943 0.965 0.947 0.965 0.976 0.938 0.920 0.947 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
32. H38K22.1 evl-14 3704 7.601 0.947 0.954 0.941 0.954 0.975 0.969 0.946 0.915
33. T05E8.3 let-355 8169 7.591 0.933 0.953 0.959 0.953 0.969 0.961 0.948 0.915
34. F46B6.3 smg-4 4959 7.591 0.943 0.953 0.945 0.953 0.957 0.919 0.970 0.951 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
35. C18G1.5 hil-4 21692 7.59 0.934 0.953 0.961 0.953 0.972 0.948 0.940 0.929 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
36. B0495.6 moa-2 6366 7.589 0.919 0.950 0.962 0.950 0.980 0.964 0.927 0.937
37. D2089.1 rsp-7 11057 7.585 0.961 0.962 0.963 0.962 0.928 0.945 0.917 0.947 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
38. Y105E8A.17 ekl-4 4732 7.58 0.922 0.948 0.935 0.948 0.963 0.950 0.949 0.965
39. F41E6.4 smk-1 22394 7.578 0.971 0.955 0.957 0.955 0.931 0.936 0.919 0.954 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
40. F52C9.8 pqe-1 7546 7.578 0.948 0.952 0.952 0.952 0.930 0.928 0.969 0.947 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
41. Y2H9A.1 mes-4 3566 7.572 0.945 0.951 0.931 0.951 0.947 0.973 0.942 0.932 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
42. C53D5.6 imb-3 28921 7.572 0.919 0.955 0.926 0.955 0.970 0.968 0.930 0.949 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
43. T06D10.2 chaf-1 8121 7.571 0.943 0.950 0.933 0.950 0.953 0.954 0.932 0.956 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
44. B0035.3 B0035.3 4118 7.569 0.942 0.961 0.950 0.961 0.980 0.923 0.929 0.923
45. H27M09.1 sacy-1 3342 7.569 0.947 0.948 0.959 0.948 0.958 0.955 0.953 0.901 Suppressor of ACY-4 sterility [Source:RefSeq peptide;Acc:NP_491962]
46. R07G3.3 npp-21 3792 7.567 0.921 0.959 0.927 0.959 0.965 0.951 0.929 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
47. F52C9.7 mog-3 9880 7.565 0.928 0.964 0.954 0.964 0.981 0.952 0.907 0.915 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
48. R13F6.10 cra-1 11610 7.565 0.940 0.941 0.921 0.941 0.987 0.952 0.949 0.934 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
49. C34E10.5 prmt-5 12277 7.564 0.939 0.946 0.950 0.946 0.987 0.949 0.916 0.931 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
50. F56D2.6 ddx-15 12282 7.564 0.955 0.945 0.947 0.945 0.982 0.930 0.931 0.929 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
51. T09A5.8 cec-3 5813 7.564 0.898 0.955 0.934 0.955 0.985 0.965 0.937 0.935 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
52. K06H7.3 vms-1 4583 7.563 0.935 0.952 0.959 0.952 0.928 0.985 0.956 0.896
53. C48E7.3 lpd-2 10330 7.563 0.948 0.955 0.947 0.955 0.976 0.942 0.888 0.952 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
54. Y65B4BL.2 deps-1 18277 7.563 0.956 0.960 0.959 0.960 0.973 0.926 0.915 0.914
55. F38A5.13 dnj-11 19678 7.561 0.979 0.951 0.964 0.951 0.941 0.936 0.883 0.956 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
56. T20G5.11 rde-4 3966 7.561 0.941 0.961 0.937 0.961 0.968 0.958 0.895 0.940 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
57. W02D9.1 pri-2 6048 7.559 0.934 0.945 0.957 0.945 0.978 0.952 0.930 0.918 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
58. T13F2.7 sna-2 4771 7.558 0.937 0.943 0.911 0.943 0.977 0.952 0.951 0.944 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
59. T10F2.3 ulp-1 8351 7.554 0.925 0.952 0.940 0.952 0.928 0.939 0.949 0.969 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
60. C32F10.5 hmg-3 5776 7.552 0.960 0.949 0.938 0.949 0.960 0.957 0.915 0.924 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
61. F23F1.1 nfyc-1 9983 7.552 0.956 0.959 0.947 0.959 0.973 0.922 0.904 0.932 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
62. Y110A7A.8 prp-31 4436 7.55 0.941 0.964 0.921 0.964 0.954 0.958 0.904 0.944 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
63. ZK1236.7 ufbp-1 6217 7.549 0.948 0.966 0.948 0.966 0.950 0.954 0.925 0.892 DDRGK domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34623]
64. W01B6.9 ndc-80 4670 7.546 0.912 0.958 0.952 0.958 0.963 0.926 0.932 0.945 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
65. F12F6.3 rib-1 10524 7.546 0.916 0.964 0.959 0.964 0.928 0.912 0.937 0.966 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
66. Y18D10A.1 attf-6 6942 7.546 0.952 0.936 0.930 0.936 0.975 0.972 0.927 0.918 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
67. ZK858.1 gld-4 14162 7.545 0.908 0.951 0.955 0.951 0.966 0.962 0.900 0.952 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
68. F36D4.3 hum-2 16493 7.545 0.945 0.948 0.945 0.948 0.959 0.937 0.928 0.935 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
69. T23B12.4 natc-1 7759 7.544 0.942 0.949 0.935 0.949 0.952 0.907 0.932 0.978 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
70. EEED8.5 mog-5 4698 7.544 0.930 0.944 0.948 0.944 0.963 0.960 0.926 0.929 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
71. K01G5.4 ran-1 32379 7.543 0.947 0.969 0.954 0.969 0.967 0.944 0.878 0.915 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
72. Y48G8AL.6 smg-2 12561 7.543 0.950 0.954 0.949 0.954 0.953 0.956 0.883 0.944 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
73. C03D6.4 npp-14 4889 7.543 0.936 0.959 0.926 0.959 0.956 0.934 0.933 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
74. T01G9.4 npp-2 5361 7.542 0.934 0.953 0.926 0.953 0.949 0.953 0.910 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
75. C25D7.8 otub-1 7941 7.542 0.932 0.963 0.955 0.963 0.982 0.939 0.899 0.909 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
76. C27B7.1 spr-2 14958 7.541 0.911 0.965 0.960 0.965 0.972 0.905 0.925 0.938 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
77. T10F2.4 prp-19 11298 7.539 0.918 0.957 0.939 0.957 0.983 0.954 0.894 0.937 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
78. T07D4.3 rha-1 5898 7.539 0.925 0.954 0.945 0.954 0.958 0.942 0.935 0.926 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
79. K01C8.10 cct-4 15077 7.539 0.947 0.945 0.925 0.945 0.973 0.965 0.901 0.938 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
80. C08B11.6 arp-6 4646 7.538 0.929 0.931 0.963 0.931 0.969 0.960 0.923 0.932 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
81. C06E7.1 sams-3 26921 7.537 0.942 0.952 0.942 0.952 0.957 0.951 0.930 0.911 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
82. T17E9.1 kin-18 8172 7.536 0.940 0.940 0.960 0.940 0.925 0.942 0.929 0.960 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
83. F44A2.1 tag-153 16535 7.535 0.956 0.941 0.942 0.941 0.947 0.933 0.908 0.967
84. K08E3.8 mdt-29 4678 7.534 0.923 0.969 0.912 0.969 0.975 0.967 0.908 0.911 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
85. B0025.2 csn-2 5205 7.534 0.928 0.947 0.949 0.947 0.958 0.956 0.902 0.947 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
86. K12D12.2 npp-3 6914 7.534 0.943 0.927 0.942 0.927 0.954 0.964 0.944 0.933 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
87. D1081.9 D1081.9 3792 7.534 0.942 0.938 0.964 0.938 0.967 0.940 0.911 0.934
88. F38H4.7 tag-30 4315 7.533 0.913 0.943 0.908 0.943 0.977 0.962 0.918 0.969
89. F32H2.4 thoc-3 3861 7.533 0.920 0.968 0.959 0.968 0.977 0.909 0.898 0.934 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
90. F37E3.1 ncbp-1 5649 7.532 0.960 0.955 0.943 0.955 0.953 0.954 0.926 0.886 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
91. C39E9.13 rfc-3 9443 7.531 0.918 0.962 0.953 0.962 0.963 0.959 0.900 0.914 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
92. W02F12.6 sna-1 7338 7.529 0.930 0.958 0.935 0.958 0.983 0.973 0.855 0.937 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
93. C13G5.2 C13G5.2 3532 7.529 0.949 0.951 0.956 0.951 0.936 0.913 0.949 0.924
94. Y47G6A.8 crn-1 3494 7.529 0.944 0.956 0.923 0.956 0.960 0.916 0.936 0.938 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
95. K08F11.5 miro-1 4512 7.528 0.952 0.962 0.946 0.962 0.947 0.935 0.925 0.899 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
96. R01H2.6 ubc-18 13394 7.528 0.903 0.973 0.933 0.973 0.918 0.946 0.920 0.962 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
97. C38D4.3 mel-28 3515 7.528 0.956 0.917 0.941 0.917 0.964 0.953 0.943 0.937
98. R12C12.2 ran-5 14517 7.528 0.940 0.961 0.954 0.961 0.974 0.929 0.923 0.886 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
99. T23B12.7 dnj-22 2874 7.527 0.964 0.919 0.970 0.919 0.915 0.937 0.966 0.937 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
100. T19B4.2 npp-7 13073 7.527 0.917 0.967 0.947 0.967 0.989 0.921 0.883 0.936 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA