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Results for C39E9.13

Gene ID Gene Name Reads Transcripts Annotation
C39E9.13 rfc-3 9443 C39E9.13 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]

Genes with expression patterns similar to C39E9.13

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C39E9.13 rfc-3 9443 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
2. C18G1.5 hil-4 21692 7.816 0.969 0.978 0.987 0.978 0.986 0.990 0.977 0.951 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
3. Y73F8A.34 tag-349 7966 7.807 0.969 0.971 0.989 0.971 0.975 0.975 0.983 0.974
4. C36B1.3 rpb-3 4442 7.77 0.965 0.984 0.973 0.984 0.984 0.941 0.978 0.961 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
5. C09G4.3 cks-1 17852 7.766 0.961 0.983 0.987 0.983 0.994 0.938 0.981 0.939 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
6. F58A4.3 hcp-3 8787 7.759 0.955 0.969 0.990 0.969 0.986 0.959 0.954 0.977 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
7. Y65B4BL.2 deps-1 18277 7.747 0.952 0.975 0.984 0.975 0.988 0.946 0.964 0.963
8. D1081.8 cdc-5L 8553 7.726 0.963 0.977 0.989 0.977 0.980 0.947 0.962 0.931 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
9. Y71G12B.1 chaf-2 3451 7.721 0.966 0.977 0.976 0.977 0.978 0.954 0.967 0.926 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
10. T09A5.8 cec-3 5813 7.719 0.945 0.985 0.983 0.985 0.966 0.972 0.974 0.909 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
11. W02D9.1 pri-2 6048 7.716 0.953 0.966 0.971 0.966 0.973 0.983 0.947 0.957 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
12. K01G5.4 ran-1 32379 7.713 0.962 0.982 0.971 0.982 0.977 0.947 0.954 0.938 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
13. D1054.14 prp-38 6504 7.712 0.946 0.977 0.955 0.977 0.984 0.954 0.954 0.965 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
14. F31E3.3 rfc-4 3828 7.708 0.957 0.973 0.979 0.973 0.975 0.937 0.980 0.934 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
15. D1081.9 D1081.9 3792 7.704 0.951 0.967 0.966 0.967 0.971 0.968 0.952 0.962
16. T20G5.11 rde-4 3966 7.703 0.948 0.963 0.961 0.963 0.985 0.961 0.971 0.951 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
17. W01G7.3 rpb-11 7826 7.702 0.950 0.955 0.985 0.955 0.978 0.937 0.972 0.970 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
18. C02B10.5 C02B10.5 9171 7.702 0.965 0.967 0.981 0.967 0.960 0.932 0.973 0.957
19. T01G9.4 npp-2 5361 7.702 0.937 0.980 0.956 0.980 0.968 0.976 0.979 0.926 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
20. C27B7.1 spr-2 14958 7.7 0.956 0.984 0.985 0.984 0.981 0.899 0.968 0.943 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
21. W01B6.9 ndc-80 4670 7.698 0.945 0.983 0.981 0.983 0.983 0.954 0.941 0.928 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
22. F18E2.3 scc-3 13464 7.696 0.941 0.982 0.977 0.982 0.964 0.967 0.965 0.918 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
23. F58B6.3 par-2 3914 7.689 0.934 0.981 0.963 0.981 0.967 0.960 0.974 0.929
24. W02F12.6 sna-1 7338 7.689 0.967 0.979 0.973 0.979 0.971 0.967 0.951 0.902 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
25. F56D1.7 daz-1 23684 7.688 0.933 0.950 0.976 0.950 0.981 0.980 0.972 0.946 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
26. Y11D7A.12 flh-1 4612 7.686 0.950 0.980 0.981 0.980 0.987 0.940 0.947 0.921 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
27. T12D8.3 acbp-5 6816 7.68 0.957 0.981 0.984 0.981 0.984 0.915 0.984 0.894 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
28. B0252.4 cyn-10 3765 7.679 0.970 0.970 0.935 0.970 0.973 0.981 0.973 0.907 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
29. W02B12.3 rsp-1 9235 7.676 0.943 0.962 0.972 0.962 0.973 0.945 0.962 0.957 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
30. F42A6.7 hrp-1 28201 7.673 0.949 0.975 0.962 0.975 0.981 0.958 0.957 0.916 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
31. C48B4.11 C48B4.11 4384 7.673 0.919 0.974 0.984 0.974 0.971 0.949 0.954 0.948
32. C43E11.1 acin-1 7781 7.672 0.891 0.967 0.964 0.967 0.991 0.986 0.964 0.942 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
33. T07C4.10 T07C4.10 1563 7.671 0.960 0.930 0.978 0.930 0.980 0.948 0.963 0.982
34. D2089.1 rsp-7 11057 7.669 0.952 0.971 0.970 0.971 0.972 0.939 0.930 0.964 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
35. Y47G6A.8 crn-1 3494 7.668 0.944 0.967 0.977 0.967 0.990 0.941 0.946 0.936 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
36. F32D1.6 neg-1 4990 7.667 0.939 0.952 0.959 0.952 0.955 0.972 0.977 0.961 Negative Effect on Gut development [Source:RefSeq peptide;Acc:NP_001256036]
37. R06F6.5 npp-19 5067 7.667 0.919 0.977 0.977 0.977 0.981 0.976 0.932 0.928 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
38. E01A2.4 let-504 9788 7.667 0.921 0.979 0.946 0.979 0.971 0.982 0.951 0.938
39. K12D12.1 top-2 18694 7.666 0.940 0.975 0.983 0.975 0.949 0.939 0.947 0.958 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
40. F37E3.1 ncbp-1 5649 7.665 0.952 0.965 0.978 0.965 0.957 0.971 0.948 0.929 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
41. Y111B2A.18 rsp-3 43731 7.664 0.957 0.970 0.963 0.970 0.988 0.928 0.970 0.918 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
42. T07F8.3 gld-3 9324 7.663 0.977 0.985 0.977 0.985 0.975 0.950 0.963 0.851 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
43. F10C2.2 kup-1 3852 7.663 0.936 0.975 0.972 0.975 0.969 0.927 0.971 0.938
44. B0464.9 B0464.9 2997 7.663 0.923 0.979 0.958 0.979 0.974 0.944 0.955 0.951 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
45. F28B3.7 him-1 18274 7.662 0.926 0.965 0.959 0.965 0.970 0.949 0.963 0.965 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
46. C03D6.4 npp-14 4889 7.661 0.940 0.980 0.953 0.980 0.988 0.940 0.920 0.960 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
47. C18G1.4 pgl-3 5291 7.661 0.943 0.974 0.965 0.974 0.992 0.922 0.942 0.949 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
48. B0495.6 moa-2 6366 7.661 0.959 0.959 0.967 0.959 0.986 0.936 0.956 0.939
49. T05F1.6 hsr-9 13312 7.66 0.928 0.974 0.967 0.974 0.981 0.966 0.940 0.930
50. K02F3.11 rnp-5 6205 7.659 0.963 0.962 0.973 0.962 0.973 0.931 0.961 0.934 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
51. T17E9.1 kin-18 8172 7.658 0.964 0.959 0.985 0.959 0.955 0.956 0.946 0.934 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
52. F23F1.1 nfyc-1 9983 7.657 0.939 0.964 0.971 0.964 0.939 0.950 0.963 0.967 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
53. Y113G7B.23 swsn-1 13766 7.656 0.959 0.989 0.963 0.989 0.977 0.904 0.947 0.928 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
54. T01C3.1 cdt-2 5193 7.655 0.923 0.963 0.980 0.963 0.979 0.959 0.958 0.930 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
55. Y61A9LA.8 sut-2 11388 7.655 0.916 0.962 0.972 0.962 0.984 0.964 0.946 0.949 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
56. Y43F8C.14 ani-3 3013 7.654 0.901 0.963 0.984 0.963 0.977 0.984 0.939 0.943 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
57. T21D12.3 pqbp-1.1 5755 7.653 0.972 0.943 0.958 0.943 0.978 0.968 0.977 0.914 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
58. Y17G7A.1 hmg-12 29989 7.652 0.947 0.976 0.961 0.976 0.946 0.935 0.980 0.931 HMG [Source:RefSeq peptide;Acc:NP_496544]
59. ZK1098.8 mut-7 4940 7.651 0.949 0.966 0.981 0.966 0.989 0.930 0.953 0.917 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
60. W03G1.6 pig-1 5015 7.651 0.935 0.970 0.989 0.970 0.960 0.951 0.962 0.914 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
61. Y43C5A.6 rad-51 5327 7.651 0.960 0.955 0.981 0.955 0.987 0.930 0.926 0.957 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
62. F56A3.3 npp-6 5425 7.65 0.951 0.955 0.973 0.955 0.972 0.955 0.936 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
63. B0205.1 B0205.1 2403 7.65 0.969 0.961 0.979 0.961 0.962 0.957 0.964 0.897
64. T04A8.14 emb-5 11746 7.65 0.953 0.981 0.972 0.981 0.980 0.920 0.950 0.913 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
65. C09H10.6 nasp-1 6094 7.649 0.956 0.976 0.968 0.976 0.964 0.962 0.930 0.917 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
66. T13H5.7 rnh-2 3204 7.647 0.952 0.976 0.983 0.976 0.965 0.922 0.912 0.961 Ribonuclease H2 subunit A [Source:UniProtKB/Swiss-Prot;Acc:Q9U6P6]
67. Y54E2A.3 tac-1 6308 7.647 0.949 0.963 0.970 0.963 0.985 0.942 0.955 0.920 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
68. C26E6.5 fsn-1 6615 7.646 0.960 0.974 0.977 0.974 0.948 0.945 0.972 0.896 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
69. K02F2.3 teg-4 3873 7.643 0.914 0.962 0.975 0.962 0.977 0.969 0.945 0.939 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
70. C34G6.5 cdc-7 2956 7.641 0.921 0.975 0.976 0.975 0.961 0.947 0.923 0.963 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491705]
71. Y56A3A.17 npp-16 5391 7.641 0.975 0.972 0.962 0.972 0.964 0.963 0.927 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
72. W03D2.4 pcn-1 20288 7.64 0.946 0.978 0.986 0.978 0.951 0.970 0.922 0.909 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
73. T06D10.2 chaf-1 8121 7.64 0.949 0.991 0.977 0.991 0.946 0.975 0.925 0.886 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
74. Y17G7B.5 mcm-2 6246 7.64 0.949 0.968 0.978 0.968 0.917 0.953 0.934 0.973 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
75. C17E4.10 C17E4.10 7034 7.64 0.948 0.961 0.976 0.961 0.984 0.964 0.960 0.886
76. R07G3.5 pgam-5 11646 7.64 0.967 0.953 0.961 0.953 0.978 0.926 0.959 0.943 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
77. C14B1.9 C14B1.9 6483 7.638 0.964 0.969 0.941 0.969 0.977 0.934 0.950 0.934
78. R01H2.6 ubc-18 13394 7.637 0.962 0.987 0.975 0.987 0.956 0.938 0.920 0.912 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
79. Y49E10.3 pph-4.2 8662 7.633 0.920 0.977 0.990 0.977 0.973 0.918 0.958 0.920 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
80. F32E10.6 cec-5 10643 7.632 0.956 0.937 0.956 0.937 0.976 0.958 0.952 0.960 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
81. Y54E5A.4 npp-4 6288 7.632 0.933 0.975 0.971 0.975 0.966 0.934 0.949 0.929 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
82. Y105E8A.17 ekl-4 4732 7.631 0.929 0.958 0.967 0.958 0.960 0.970 0.949 0.940
83. C06E7.1 sams-3 26921 7.631 0.906 0.960 0.926 0.960 0.994 0.988 0.958 0.939 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
84. Y54E5B.3 let-49 2437 7.629 0.956 0.973 0.957 0.973 0.968 0.881 0.960 0.961 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
85. Y39G10AR.7 ekl-7 7072 7.629 0.896 0.968 0.970 0.968 0.985 0.936 0.951 0.955
86. T24F1.2 samp-1 8422 7.629 0.962 0.965 0.982 0.965 0.991 0.944 0.958 0.862 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
87. C36B1.8 gls-1 8617 7.628 0.946 0.958 0.973 0.958 0.987 0.949 0.939 0.918 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
88. F28D9.1 rsr-1 4282 7.628 0.920 0.982 0.975 0.982 0.961 0.950 0.948 0.910 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
89. F35G12.8 smc-4 6202 7.628 0.946 0.965 0.975 0.965 0.985 0.934 0.933 0.925 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
90. F46A9.4 skr-2 16831 7.628 0.922 0.920 0.950 0.920 0.992 0.980 0.987 0.957 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
91. EEED8.1 tofu-6 3962 7.627 0.968 0.972 0.972 0.972 0.950 0.936 0.934 0.923 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
92. T23G7.5 pir-1 2816 7.626 0.953 0.969 0.964 0.969 0.953 0.914 0.965 0.939 Phosphatase Interacting with RNA/RNP [Source:RefSeq peptide;Acc:NP_495959]
93. C02B10.2 snpn-1 5519 7.625 0.947 0.970 0.977 0.970 0.953 0.940 0.951 0.917 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
94. K04C2.4 brd-1 2439 7.625 0.929 0.973 0.950 0.973 0.954 0.958 0.929 0.959 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
95. K10C3.2 ensa-1 19836 7.623 0.984 0.984 0.986 0.984 0.964 0.864 0.944 0.913 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
96. T10F2.4 prp-19 11298 7.622 0.938 0.959 0.955 0.959 0.990 0.948 0.970 0.903 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
97. Y74C9A.4 rcor-1 4686 7.621 0.949 0.936 0.969 0.936 0.970 0.986 0.958 0.917 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
98. C08B11.5 sap-49 10553 7.619 0.955 0.968 0.937 0.968 0.990 0.936 0.990 0.875 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
99. Y34D9A.4 spd-1 3396 7.619 0.933 0.952 0.973 0.952 0.965 0.955 0.974 0.915 SPD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED58]
100. C05C8.6 hpo-9 8263 7.619 0.944 0.972 0.976 0.972 0.964 0.912 0.968 0.911

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA