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Results for F43E2.2

Gene ID Gene Name Reads Transcripts Annotation
F43E2.2 rpb-4 2812 F43E2.2 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]

Genes with expression patterns similar to F43E2.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F43E2.2 rpb-4 2812 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]
2. T10C6.4 srx-44 8454 7.715 0.953 0.972 0.969 0.972 0.980 0.954 0.948 0.967 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
3. C09G4.3 cks-1 17852 7.664 0.958 0.953 0.951 0.953 0.988 0.962 0.943 0.956 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
4. C18G1.5 hil-4 21692 7.662 0.947 0.967 0.963 0.967 0.972 0.987 0.911 0.948 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
5. Y73F8A.34 tag-349 7966 7.659 0.975 0.956 0.968 0.956 0.983 0.971 0.920 0.930
6. W02B12.3 rsp-1 9235 7.652 0.943 0.974 0.963 0.974 0.956 0.974 0.924 0.944 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
7. F32H2.4 thoc-3 3861 7.651 0.951 0.968 0.968 0.968 0.973 0.943 0.921 0.959 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
8. K12C11.2 smo-1 12784 7.649 0.971 0.937 0.943 0.937 0.954 0.991 0.946 0.970 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
9. B0252.4 cyn-10 3765 7.645 0.977 0.960 0.908 0.960 0.962 0.982 0.966 0.930 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
10. Y110A7A.8 prp-31 4436 7.64 0.954 0.962 0.935 0.962 0.988 0.954 0.943 0.942 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
11. C27B7.1 spr-2 14958 7.636 0.974 0.956 0.969 0.956 0.963 0.937 0.944 0.937 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
12. Y65B4BL.2 deps-1 18277 7.636 0.957 0.963 0.976 0.963 0.964 0.972 0.911 0.930
13. C36B1.3 rpb-3 4442 7.632 0.918 0.965 0.962 0.965 0.968 0.970 0.942 0.942 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
14. K11D12.2 pqn-51 15951 7.629 0.945 0.955 0.951 0.955 0.963 0.943 0.947 0.970 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
15. Y47G6A.8 crn-1 3494 7.628 0.950 0.969 0.942 0.969 0.978 0.971 0.916 0.933 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
16. W01G7.3 rpb-11 7826 7.627 0.930 0.959 0.970 0.959 0.960 0.966 0.945 0.938 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
17. F56D1.7 daz-1 23684 7.626 0.914 0.943 0.980 0.943 0.973 0.972 0.945 0.956 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
18. T19B4.2 npp-7 13073 7.622 0.952 0.971 0.951 0.971 0.965 0.941 0.899 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
19. W02F12.6 sna-1 7338 7.621 0.950 0.945 0.962 0.945 0.953 0.971 0.937 0.958 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
20. Y54E2A.3 tac-1 6308 7.619 0.948 0.945 0.945 0.945 0.982 0.974 0.935 0.945 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
21. F23F1.1 nfyc-1 9983 7.619 0.960 0.960 0.956 0.960 0.936 0.978 0.918 0.951 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
22. C39E9.13 rfc-3 9443 7.617 0.933 0.953 0.962 0.953 0.988 0.969 0.948 0.911 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
23. Y111B2A.18 rsp-3 43731 7.616 0.956 0.943 0.933 0.943 0.981 0.967 0.919 0.974 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
24. F56A8.6 cpf-2 2730 7.613 0.943 0.962 0.952 0.962 0.991 0.956 0.892 0.955 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
25. K01G5.4 ran-1 32379 7.613 0.949 0.963 0.952 0.963 0.960 0.967 0.891 0.968 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
26. C08B11.5 sap-49 10553 7.612 0.931 0.959 0.920 0.959 0.979 0.962 0.948 0.954 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
27. T12D8.3 acbp-5 6816 7.608 0.945 0.966 0.944 0.966 0.964 0.930 0.939 0.954 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
28. T10F2.4 prp-19 11298 7.607 0.930 0.937 0.945 0.937 0.984 0.970 0.931 0.973 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
29. F42A6.7 hrp-1 28201 7.606 0.933 0.942 0.942 0.942 0.972 0.978 0.915 0.982 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
30. F32A5.7 lsm-4 3785 7.605 0.959 0.961 0.952 0.961 0.972 0.925 0.931 0.944 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
31. F58B6.3 par-2 3914 7.604 0.945 0.956 0.942 0.956 0.967 0.978 0.929 0.931
32. T05F1.6 hsr-9 13312 7.603 0.948 0.956 0.958 0.956 0.974 0.966 0.911 0.934
33. C48E7.3 lpd-2 10330 7.603 0.948 0.948 0.954 0.948 0.955 0.972 0.921 0.957 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
34. B0025.2 csn-2 5205 7.6 0.915 0.952 0.953 0.952 0.967 0.958 0.942 0.961 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
35. C48B4.11 C48B4.11 4384 7.6 0.939 0.959 0.970 0.959 0.951 0.969 0.906 0.947
36. W03F9.5 ttb-1 8682 7.599 0.953 0.943 0.957 0.943 0.980 0.933 0.935 0.955 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
37. T20G5.11 rde-4 3966 7.597 0.924 0.956 0.958 0.956 0.969 0.957 0.941 0.936 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
38. F32E10.6 cec-5 10643 7.596 0.953 0.950 0.949 0.950 0.967 0.969 0.899 0.959 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
39. Y71G12B.1 chaf-2 3451 7.595 0.938 0.971 0.938 0.971 0.970 0.973 0.902 0.932 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
40. B0495.6 moa-2 6366 7.594 0.960 0.942 0.965 0.942 0.979 0.956 0.915 0.935
41. K02F3.11 rnp-5 6205 7.593 0.966 0.954 0.963 0.954 0.973 0.952 0.875 0.956 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
42. EEED8.7 rsp-4 13043 7.593 0.956 0.937 0.953 0.937 0.965 0.951 0.926 0.968 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
43. ZC395.8 ztf-8 5521 7.591 0.953 0.943 0.956 0.943 0.976 0.951 0.953 0.916 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
44. C06E7.1 sams-3 26921 7.59 0.912 0.950 0.946 0.950 0.987 0.992 0.925 0.928 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
45. C02B10.2 snpn-1 5519 7.588 0.965 0.943 0.945 0.943 0.966 0.937 0.942 0.947 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
46. T20F5.7 T20F5.7 5210 7.586 0.961 0.933 0.968 0.933 0.956 0.941 0.943 0.951
47. Y61A9LA.8 sut-2 11388 7.585 0.926 0.936 0.954 0.936 0.981 0.963 0.913 0.976 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
48. D2089.1 rsp-7 11057 7.584 0.933 0.955 0.968 0.955 0.965 0.959 0.883 0.966 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
49. T04A8.14 emb-5 11746 7.583 0.953 0.961 0.951 0.961 0.969 0.948 0.890 0.950 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
50. C25D7.8 otub-1 7941 7.582 0.936 0.959 0.968 0.959 0.953 0.947 0.918 0.942 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
51. T21D12.3 pqbp-1.1 5755 7.582 0.939 0.924 0.933 0.924 0.973 0.979 0.956 0.954 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
52. F46B6.3 smg-4 4959 7.581 0.938 0.931 0.968 0.931 0.987 0.974 0.902 0.950 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
53. C52E4.6 cyl-1 6405 7.581 0.913 0.956 0.957 0.956 0.957 0.975 0.932 0.935 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
54. C53D5.6 imb-3 28921 7.581 0.880 0.946 0.926 0.946 0.985 0.981 0.943 0.974 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
55. F28B3.8 imb-1 7515 7.579 0.908 0.957 0.943 0.957 0.953 0.966 0.937 0.958 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
56. Y71F9B.16 dnj-30 4262 7.578 0.917 0.947 0.977 0.947 0.965 0.963 0.885 0.977 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
57. Y49E10.3 pph-4.2 8662 7.578 0.962 0.944 0.962 0.944 0.981 0.929 0.949 0.907 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
58. Y71D11A.2 smr-1 4976 7.577 0.944 0.920 0.943 0.920 0.981 0.957 0.933 0.979 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
59. T20B12.2 tbp-1 9014 7.576 0.968 0.950 0.953 0.950 0.971 0.916 0.946 0.922 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
60. Y113G7B.23 swsn-1 13766 7.575 0.946 0.953 0.950 0.953 0.967 0.944 0.886 0.976 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
61. D1081.8 cdc-5L 8553 7.574 0.936 0.958 0.962 0.958 0.961 0.970 0.917 0.912 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
62. C17E4.10 C17E4.10 7034 7.574 0.926 0.930 0.960 0.930 0.975 0.975 0.920 0.958
63. Y47G6A.20 rnp-6 5542 7.573 0.957 0.945 0.939 0.945 0.984 0.962 0.870 0.971 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
64. F28B3.7 him-1 18274 7.573 0.939 0.930 0.967 0.930 0.969 0.978 0.930 0.930 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
65. W01B6.9 ndc-80 4670 7.572 0.942 0.958 0.967 0.958 0.975 0.940 0.896 0.936 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
66. F52C9.7 mog-3 9880 7.571 0.953 0.968 0.959 0.968 0.925 0.947 0.930 0.921 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
67. Y67H2A.6 csn-6 3098 7.57 0.916 0.972 0.928 0.972 0.979 0.965 0.889 0.949 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
68. F18E2.3 scc-3 13464 7.569 0.937 0.942 0.970 0.942 0.968 0.957 0.904 0.949 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
69. F22D6.3 nars-1 18624 7.569 0.917 0.950 0.948 0.950 0.981 0.960 0.890 0.973 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
70. C18D11.4 rsp-8 18308 7.568 0.936 0.949 0.919 0.949 0.975 0.953 0.923 0.964 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
71. F46A9.4 skr-2 16831 7.566 0.923 0.919 0.953 0.919 0.987 0.987 0.930 0.948 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
72. F33H1.4 F33H1.4 2447 7.565 0.906 0.953 0.956 0.953 0.953 0.958 0.955 0.931
73. ZK381.4 pgl-1 20651 7.564 0.884 0.949 0.952 0.949 0.970 0.981 0.938 0.941 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
74. Y54E5A.4 npp-4 6288 7.563 0.919 0.939 0.963 0.939 0.953 0.958 0.936 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
75. Y97E10AR.5 rpb-9 3598 7.561 0.938 0.944 0.907 0.944 0.949 0.965 0.940 0.974 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
76. F36A2.1 cids-2 4551 7.559 0.954 0.929 0.941 0.929 0.961 0.969 0.932 0.944 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
77. C08B11.6 arp-6 4646 7.559 0.941 0.922 0.960 0.922 0.978 0.973 0.917 0.946 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
78. F53F10.5 npp-11 3378 7.558 0.922 0.955 0.939 0.955 0.942 0.942 0.946 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
79. F52B5.5 cep-1 2194 7.555 0.930 0.961 0.917 0.961 0.952 0.945 0.946 0.943 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
80. W02D9.1 pri-2 6048 7.555 0.952 0.954 0.956 0.954 0.971 0.963 0.907 0.898 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
81. ZK970.3 mdt-22 1925 7.554 0.963 0.941 0.950 0.941 0.946 0.967 0.918 0.928 Mediator of RNA polymerase II transcription subunit 22 [Source:UniProtKB/Swiss-Prot;Acc:Q23679]
82. T01G9.4 npp-2 5361 7.554 0.959 0.942 0.930 0.942 0.974 0.927 0.924 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
83. C09H10.6 nasp-1 6094 7.554 0.976 0.953 0.920 0.953 0.964 0.987 0.842 0.959 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
84. Y49F6B.4 smu-2 4164 7.553 0.928 0.949 0.945 0.949 0.953 0.943 0.919 0.967 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
85. C33H5.12 rsp-6 23342 7.551 0.948 0.936 0.946 0.936 0.971 0.962 0.880 0.972 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
86. ZK616.6 perm-3 16186 7.55 0.942 0.942 0.921 0.942 0.958 0.961 0.918 0.966 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
87. T12D8.8 hip-1 18283 7.55 0.912 0.943 0.904 0.943 0.982 0.970 0.911 0.985 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
88. C15H11.4 dhs-22 21674 7.549 0.957 0.949 0.963 0.949 0.956 0.911 0.905 0.959 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
89. C14B1.9 C14B1.9 6483 7.548 0.966 0.937 0.915 0.937 0.961 0.965 0.941 0.926
90. K07C5.8 cash-1 10523 7.548 0.956 0.957 0.962 0.957 0.968 0.923 0.900 0.925 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
91. C50C3.6 prp-8 19582 7.548 0.918 0.936 0.962 0.936 0.975 0.958 0.890 0.973 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
92. CD4.6 pas-6 18332 7.548 0.941 0.955 0.971 0.955 0.952 0.928 0.885 0.961 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
93. T07D4.3 rha-1 5898 7.547 0.902 0.958 0.945 0.958 0.979 0.986 0.887 0.932 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
94. D1054.14 prp-38 6504 7.547 0.922 0.954 0.952 0.954 0.971 0.966 0.866 0.962 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
95. B0547.1 csn-5 3568 7.547 0.936 0.922 0.941 0.922 0.969 0.955 0.955 0.947 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
96. T21B10.5 set-17 5292 7.546 0.949 0.959 0.956 0.959 0.964 0.927 0.899 0.933 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_495902]
97. ZK686.4 snu-23 9040 7.546 0.949 0.963 0.960 0.963 0.958 0.943 0.871 0.939 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
98. C34E10.5 prmt-5 12277 7.545 0.890 0.935 0.957 0.935 0.950 0.968 0.929 0.981 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
99. Y53H1C.1 aat-9 5713 7.543 0.951 0.947 0.946 0.947 0.960 0.968 0.871 0.953 Amino Acid Transporter [Source:RefSeq peptide;Acc:NP_001021788]
100. Y54E5B.3 let-49 2437 7.542 0.911 0.943 0.949 0.943 0.943 0.938 0.975 0.940 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA