C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F31E3.3

Gene ID Gene Name Reads Transcripts Annotation
F31E3.3 rfc-4 3828 F31E3.3 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]

Genes with expression patterns similar to F31E3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F31E3.3 rfc-4 3828 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
2. C27B7.1 spr-2 14958 7.763 0.956 0.989 0.982 0.989 0.967 0.974 0.971 0.935 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
3. Y65B4BL.2 deps-1 18277 7.757 0.932 0.970 0.988 0.970 0.973 0.974 0.976 0.974
4. C05C8.6 hpo-9 8263 7.751 0.962 0.975 0.972 0.975 0.969 0.975 0.978 0.945
5. Y39G10AR.7 ekl-7 7072 7.739 0.926 0.974 0.977 0.974 0.981 0.983 0.967 0.957
6. F23F1.1 nfyc-1 9983 7.731 0.946 0.969 0.974 0.969 0.969 0.963 0.987 0.954 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
7. W01G7.3 rpb-11 7826 7.723 0.976 0.952 0.981 0.952 0.974 0.966 0.979 0.943 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
8. R12C12.2 ran-5 14517 7.72 0.960 0.983 0.985 0.983 0.950 0.959 0.976 0.924 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
9. K01G5.4 ran-1 32379 7.718 0.960 0.970 0.972 0.970 0.971 0.951 0.970 0.954 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
10. K02F3.11 rnp-5 6205 7.713 0.948 0.965 0.979 0.965 0.972 0.977 0.955 0.952 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
11. C39E9.13 rfc-3 9443 7.708 0.957 0.973 0.979 0.973 0.975 0.937 0.980 0.934 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
12. F32H2.4 thoc-3 3861 7.703 0.941 0.971 0.968 0.971 0.977 0.966 0.967 0.942 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
13. F56C9.6 F56C9.6 4303 7.698 0.960 0.969 0.985 0.969 0.939 0.972 0.956 0.948
14. F25B5.2 nop-1 4127 7.695 0.952 0.955 0.984 0.955 0.968 0.980 0.947 0.954 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
15. C02B10.5 C02B10.5 9171 7.694 0.966 0.961 0.977 0.961 0.934 0.967 0.982 0.946
16. F32E10.6 cec-5 10643 7.694 0.947 0.952 0.964 0.952 0.955 0.983 0.971 0.970 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
17. T25G3.3 T25G3.3 7285 7.692 0.958 0.967 0.955 0.967 0.954 0.970 0.980 0.941
18. C36B1.3 rpb-3 4442 7.688 0.958 0.957 0.982 0.957 0.958 0.963 0.949 0.964 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
19. Y54E5A.4 npp-4 6288 7.685 0.953 0.979 0.963 0.979 0.957 0.962 0.962 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
20. T05H4.14 gad-1 7979 7.685 0.944 0.973 0.982 0.973 0.974 0.980 0.966 0.893 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
21. C48B4.11 C48B4.11 4384 7.683 0.934 0.975 0.977 0.975 0.955 0.947 0.978 0.942
22. Y17G7A.1 hmg-12 29989 7.682 0.958 0.972 0.970 0.972 0.937 0.956 0.987 0.930 HMG [Source:RefSeq peptide;Acc:NP_496544]
23. W02B12.3 rsp-1 9235 7.678 0.958 0.947 0.979 0.947 0.963 0.964 0.979 0.941 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
24. T28D9.2 rsp-5 6460 7.678 0.962 0.959 0.955 0.959 0.938 0.979 0.984 0.942 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
25. F56D1.7 daz-1 23684 7.676 0.940 0.956 0.975 0.956 0.958 0.963 0.981 0.947 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
26. W03G1.6 pig-1 5015 7.676 0.899 0.962 0.988 0.962 0.970 0.981 0.981 0.933 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
27. T06A10.4 lsy-13 7631 7.676 0.928 0.963 0.964 0.963 0.972 0.972 0.962 0.952
28. C06A5.9 rnf-1 2469 7.674 0.933 0.964 0.965 0.964 0.957 0.952 0.978 0.961 RiNg Finger protein [Source:RefSeq peptide;Acc:NP_491738]
29. Y73F8A.34 tag-349 7966 7.672 0.977 0.949 0.989 0.949 0.957 0.966 0.969 0.916
30. Y56A3A.17 npp-16 5391 7.671 0.957 0.962 0.953 0.962 0.957 0.973 0.953 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
31. C08B11.5 sap-49 10553 7.67 0.960 0.974 0.936 0.974 0.980 0.963 0.985 0.898 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
32. C33H5.15 sgo-1 3674 7.669 0.947 0.966 0.963 0.966 0.947 0.971 0.966 0.943 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
33. Y54H5A.3 tag-262 4269 7.668 0.950 0.968 0.950 0.968 0.969 0.949 0.978 0.936
34. Y38A8.3 ulp-2 7403 7.662 0.937 0.963 0.963 0.963 0.963 0.984 0.954 0.935 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
35. D1081.8 cdc-5L 8553 7.662 0.938 0.965 0.977 0.965 0.947 0.960 0.963 0.947 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
36. C18G1.5 hil-4 21692 7.662 0.930 0.972 0.979 0.972 0.968 0.956 0.989 0.896 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
37. Y37D8A.11 cec-7 8801 7.661 0.942 0.968 0.961 0.968 0.947 0.950 0.958 0.967 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
38. T21D12.3 pqbp-1.1 5755 7.66 0.949 0.948 0.959 0.948 0.958 0.963 0.981 0.954 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
39. C52E4.6 cyl-1 6405 7.66 0.957 0.964 0.962 0.964 0.967 0.955 0.955 0.936 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
40. F55G1.8 plk-3 12036 7.659 0.928 0.977 0.967 0.977 0.960 0.992 0.960 0.898 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
41. T23H2.1 npp-12 12425 7.658 0.949 0.965 0.969 0.965 0.942 0.962 0.962 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
42. T04A8.14 emb-5 11746 7.653 0.952 0.975 0.976 0.975 0.950 0.931 0.950 0.944 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
43. F56F3.1 ifet-1 25772 7.652 0.932 0.969 0.950 0.969 0.964 0.975 0.964 0.929 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
44. Y17G7B.5 mcm-2 6246 7.651 0.920 0.978 0.965 0.978 0.945 0.950 0.970 0.945 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
45. ZK1127.4 ZK1127.4 3088 7.65 0.958 0.953 0.957 0.953 0.961 0.963 0.971 0.934 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
46. F59A2.1 npp-9 34375 7.65 0.954 0.972 0.959 0.972 0.933 0.964 0.935 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
47. F22D6.3 nars-1 18624 7.648 0.962 0.970 0.936 0.970 0.969 0.945 0.963 0.933 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
48. ZK381.1 him-3 4913 7.646 0.956 0.947 0.953 0.947 0.931 0.992 0.986 0.934 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
49. W02D9.1 pri-2 6048 7.645 0.948 0.969 0.971 0.969 0.960 0.940 0.975 0.913 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
50. C24G6.1 syp-2 2843 7.643 0.964 0.925 0.963 0.925 0.977 0.969 0.981 0.939
51. Y37D8A.9 mrg-1 14369 7.643 0.954 0.976 0.963 0.976 0.945 0.954 0.946 0.929 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
52. T01B11.3 syx-4 1573 7.641 0.935 0.979 0.930 0.979 0.968 0.966 0.941 0.943 Putative syntaxin-4 [Source:UniProtKB/Swiss-Prot;Acc:P91409]
53. F28B3.7 him-1 18274 7.641 0.931 0.970 0.976 0.970 0.943 0.949 0.968 0.934 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
54. C08B6.9 aos-1 3892 7.64 0.976 0.984 0.914 0.984 0.963 0.951 0.946 0.922 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
55. EEED8.1 tofu-6 3962 7.639 0.952 0.964 0.972 0.964 0.968 0.966 0.947 0.906 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
56. F37A4.9 bath-41 2558 7.638 0.925 0.960 0.948 0.960 0.971 0.970 0.961 0.943 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
57. Y32F6A.1 set-22 2474 7.635 0.937 0.958 0.970 0.958 0.962 0.929 0.974 0.947 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
58. C25A1.4 C25A1.4 15507 7.634 0.975 0.961 0.981 0.961 0.953 0.968 0.961 0.874
59. F10E9.8 sas-4 3703 7.633 0.939 0.969 0.979 0.969 0.942 0.971 0.958 0.906 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
60. F10G7.3 unc-85 5206 7.633 0.941 0.959 0.951 0.959 0.943 0.976 0.975 0.929 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
61. T19B4.2 npp-7 13073 7.632 0.951 0.973 0.960 0.973 0.960 0.975 0.960 0.880 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
62. T23G7.5 pir-1 2816 7.632 0.946 0.966 0.966 0.966 0.921 0.939 0.972 0.956 Phosphatase Interacting with RNA/RNP [Source:RefSeq peptide;Acc:NP_495959]
63. B0304.4 B0304.4 382 7.631 0.966 0.947 0.973 0.947 0.968 0.918 0.972 0.940
64. B0035.3 B0035.3 4118 7.631 0.964 0.962 0.977 0.962 0.955 0.951 0.970 0.890
65. Y54E2A.3 tac-1 6308 7.63 0.940 0.964 0.966 0.964 0.976 0.934 0.972 0.914 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
66. F33H2.5 pole-1 3734 7.63 0.930 0.956 0.958 0.956 0.961 0.972 0.970 0.927 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
67. ZK328.2 eftu-2 7040 7.629 0.904 0.973 0.973 0.973 0.969 0.960 0.966 0.911 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
68. K04C2.4 brd-1 2439 7.628 0.940 0.982 0.962 0.982 0.967 0.937 0.948 0.910 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
69. F41H10.4 F41H10.4 3295 7.628 0.956 0.968 0.956 0.968 0.959 0.947 0.950 0.924
70. R53.6 psf-1 4721 7.627 0.965 0.949 0.970 0.949 0.944 0.971 0.957 0.922 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
71. F52C9.7 mog-3 9880 7.627 0.957 0.965 0.974 0.965 0.950 0.972 0.986 0.858 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
72. C09G4.3 cks-1 17852 7.627 0.960 0.974 0.966 0.974 0.976 0.922 0.960 0.895 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
73. C13G5.2 C13G5.2 3532 7.626 0.945 0.957 0.989 0.957 0.936 0.970 0.956 0.916
74. ZK1098.8 mut-7 4940 7.626 0.929 0.973 0.969 0.973 0.966 0.955 0.925 0.936 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
75. F36A2.1 cids-2 4551 7.626 0.930 0.968 0.962 0.968 0.951 0.943 0.975 0.929 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
76. R07E5.14 rnp-4 11659 7.625 0.968 0.980 0.971 0.980 0.940 0.923 0.919 0.944 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
77. F18C5.2 wrn-1 3792 7.624 0.876 0.963 0.987 0.963 0.970 0.980 0.973 0.912 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
78. F10B5.5 pch-2 2299 7.623 0.953 0.971 0.916 0.971 0.957 0.983 0.965 0.907 Putative pachytene checkpoint protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09535]
79. C14B1.9 C14B1.9 6483 7.623 0.959 0.962 0.937 0.962 0.959 0.953 0.941 0.950
80. F43G9.9 cpn-1 14505 7.623 0.958 0.972 0.978 0.972 0.939 0.948 0.944 0.912 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
81. ZK507.6 cya-1 6807 7.622 0.947 0.980 0.953 0.980 0.924 0.961 0.971 0.906 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
82. F33H1.4 F33H1.4 2447 7.622 0.958 0.948 0.983 0.948 0.945 0.957 0.979 0.904
83. Y34D9A.1 mrpl-38 5291 7.621 0.952 0.960 0.933 0.960 0.967 0.946 0.989 0.914 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
84. T09A5.8 cec-3 5813 7.62 0.879 0.973 0.967 0.973 0.954 0.966 0.978 0.930 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
85. Y71F9B.16 dnj-30 4262 7.62 0.947 0.962 0.970 0.962 0.943 0.948 0.959 0.929 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
86. F58A4.3 hcp-3 8787 7.619 0.973 0.959 0.984 0.959 0.968 0.958 0.938 0.880 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
87. Y47G6A.8 crn-1 3494 7.619 0.911 0.952 0.947 0.952 0.969 0.975 0.975 0.938 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
88. ZK856.12 hpo-40 7855 7.619 0.929 0.946 0.971 0.946 0.971 0.967 0.985 0.904
89. D1054.14 prp-38 6504 7.618 0.950 0.968 0.957 0.968 0.950 0.970 0.916 0.939 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
90. F53F10.5 npp-11 3378 7.616 0.936 0.961 0.959 0.961 0.982 0.968 0.934 0.915 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
91. T10C6.4 srx-44 8454 7.615 0.971 0.964 0.979 0.964 0.953 0.932 0.960 0.892 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
92. W02F12.6 sna-1 7338 7.615 0.964 0.970 0.957 0.970 0.971 0.944 0.959 0.880 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
93. ZK1010.3 frg-1 3533 7.614 0.964 0.982 0.964 0.982 0.952 0.929 0.908 0.933 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
94. B0464.9 B0464.9 2997 7.614 0.895 0.967 0.959 0.967 0.969 0.959 0.958 0.940 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
95. K11D12.2 pqn-51 15951 7.613 0.954 0.980 0.964 0.980 0.963 0.925 0.927 0.920 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
96. T12D8.3 acbp-5 6816 7.612 0.963 0.971 0.967 0.971 0.952 0.911 0.973 0.904 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
97. Y74C9A.4 rcor-1 4686 7.612 0.945 0.960 0.965 0.960 0.958 0.908 0.959 0.957 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
98. F18E2.3 scc-3 13464 7.612 0.943 0.975 0.985 0.975 0.916 0.935 0.951 0.932 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
99. E01A2.4 let-504 9788 7.611 0.892 0.976 0.979 0.976 0.961 0.951 0.971 0.905
100. K12C11.2 smo-1 12784 7.611 0.972 0.931 0.926 0.931 0.966 0.942 0.985 0.958 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]

There are 3164 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA