C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for M03C11.5

Gene ID Gene Name Reads Transcripts Annotation
M03C11.5 ymel-1 6878 M03C11.5.1, M03C11.5.2 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]

Genes with expression patterns similar to M03C11.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M03C11.5 ymel-1 6878 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
2. T08B2.9 fars-1 12650 7.695 0.946 0.975 0.952 0.975 0.954 0.952 0.969 0.972 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
3. Y40B1B.5 eif-3.J 15061 7.688 0.964 0.964 0.972 0.964 0.951 0.970 0.951 0.952 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
4. H19N07.1 erfa-3 19869 7.682 0.954 0.961 0.968 0.961 0.946 0.966 0.956 0.970 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
5. B0464.1 dars-1 12331 7.661 0.963 0.946 0.962 0.946 0.957 0.947 0.976 0.964 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
6. F13G3.4 dylt-1 21345 7.659 0.930 0.979 0.947 0.979 0.969 0.965 0.935 0.955 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
7. Y73B6BL.6 sqd-1 41708 7.658 0.956 0.960 0.954 0.960 0.950 0.978 0.941 0.959 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
8. T05H4.6 erfa-1 12542 7.657 0.937 0.957 0.963 0.957 0.944 0.949 0.971 0.979 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
9. F08F8.3 kap-1 31437 7.65 0.950 0.959 0.948 0.959 0.957 0.963 0.955 0.959 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
10. Y67D8C.5 eel-1 30623 7.648 0.955 0.961 0.968 0.961 0.934 0.951 0.969 0.949 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
11. C09D4.5 rpl-19 56944 7.647 0.931 0.964 0.953 0.964 0.952 0.959 0.969 0.955 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
12. Y48A6B.13 spat-2 21773 7.64 0.934 0.949 0.957 0.949 0.963 0.962 0.955 0.971 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
13. K04D7.2 mspn-1 48187 7.637 0.944 0.956 0.958 0.956 0.942 0.965 0.960 0.956 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
14. F22D6.3 nars-1 18624 7.634 0.973 0.957 0.946 0.957 0.963 0.935 0.957 0.946 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
15. ZK616.6 perm-3 16186 7.631 0.940 0.948 0.956 0.948 0.961 0.961 0.958 0.959 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
16. D2013.7 eif-3.F 21004 7.631 0.940 0.954 0.967 0.954 0.964 0.950 0.946 0.956 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
17. F17C11.9 eef-1G 37911 7.63 0.942 0.963 0.946 0.963 0.951 0.932 0.969 0.964 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
18. F26D10.3 hsp-1 98277 7.625 0.963 0.963 0.956 0.963 0.919 0.967 0.937 0.957 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
19. K04G7.10 rnp-7 11219 7.622 0.941 0.954 0.961 0.954 0.947 0.972 0.958 0.935 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
20. T27F7.3 eif-1 28176 7.621 0.942 0.924 0.969 0.924 0.959 0.971 0.953 0.979 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
21. F39B2.10 dnj-12 35162 7.617 0.965 0.966 0.955 0.966 0.905 0.966 0.950 0.944 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
22. H21P03.1 mbf-1 25586 7.617 0.966 0.967 0.959 0.967 0.959 0.932 0.904 0.963 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
23. T20H4.3 pars-1 8167 7.617 0.958 0.953 0.950 0.953 0.929 0.971 0.948 0.955 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
24. Y54E10A.9 vbh-1 28746 7.616 0.951 0.964 0.968 0.964 0.924 0.946 0.962 0.937 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
25. Y65B4BR.5 icd-2 58321 7.616 0.940 0.962 0.949 0.962 0.954 0.941 0.971 0.937 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
26. T05C3.5 dnj-19 20420 7.616 0.929 0.962 0.949 0.962 0.965 0.947 0.965 0.937 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
27. K01C8.10 cct-4 15077 7.615 0.951 0.958 0.944 0.958 0.939 0.945 0.951 0.969 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
28. B0336.9 swp-1 52442 7.61 0.930 0.962 0.942 0.962 0.964 0.950 0.967 0.933 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
29. F38A5.2 F38A5.2 9024 7.608 0.937 0.954 0.942 0.954 0.957 0.945 0.954 0.965
30. C47D12.6 tars-1 23488 7.606 0.952 0.969 0.942 0.969 0.949 0.949 0.929 0.947 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
31. B0205.7 kin-3 29775 7.606 0.952 0.950 0.959 0.950 0.923 0.976 0.949 0.947 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
32. F36A4.7 ama-1 13620 7.603 0.941 0.961 0.957 0.961 0.941 0.951 0.961 0.930 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
33. K08F11.3 cif-1 10218 7.602 0.961 0.942 0.973 0.942 0.943 0.939 0.961 0.941 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
34. F42A6.7 hrp-1 28201 7.601 0.950 0.956 0.931 0.956 0.968 0.943 0.965 0.932 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
35. C34E10.5 prmt-5 12277 7.6 0.927 0.968 0.959 0.968 0.961 0.931 0.949 0.937 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
36. C15H11.4 dhs-22 21674 7.599 0.942 0.942 0.925 0.942 0.958 0.959 0.952 0.979 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
37. Y102A5A.1 cand-1 11808 7.599 0.938 0.941 0.955 0.941 0.947 0.985 0.963 0.929 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
38. Y34D9A.1 mrpl-38 5291 7.598 0.961 0.968 0.953 0.968 0.942 0.930 0.958 0.918 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
39. T12D8.8 hip-1 18283 7.595 0.949 0.931 0.964 0.931 0.937 0.954 0.980 0.949 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
40. F53A3.3 rps-22 81093 7.595 0.928 0.961 0.926 0.961 0.971 0.952 0.957 0.939 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
41. Y62E10A.1 rla-2 59665 7.594 0.930 0.964 0.938 0.964 0.957 0.943 0.965 0.933 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
42. C34E10.1 gop-3 11393 7.593 0.945 0.942 0.958 0.942 0.946 0.974 0.923 0.963 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
43. C50C3.6 prp-8 19582 7.593 0.955 0.946 0.955 0.946 0.952 0.954 0.944 0.941 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
44. F56F3.5 rps-1 85503 7.592 0.921 0.967 0.926 0.967 0.934 0.965 0.970 0.942 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
45. K04G2.1 iftb-1 12590 7.591 0.949 0.944 0.957 0.944 0.936 0.964 0.943 0.954 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
46. C18D11.4 rsp-8 18308 7.59 0.926 0.945 0.923 0.945 0.959 0.954 0.969 0.969 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
47. F57B9.5 byn-1 58236 7.59 0.956 0.960 0.953 0.960 0.942 0.950 0.944 0.925 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
48. Y57A10A.18 pqn-87 31844 7.588 0.939 0.957 0.940 0.957 0.940 0.977 0.931 0.947 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
49. Y49E10.2 glrx-5 9672 7.585 0.931 0.942 0.946 0.942 0.955 0.962 0.952 0.955 Glutaredoxin [Source:RefSeq peptide;Acc:NP_499610]
50. F22B5.9 fars-3 7209 7.584 0.944 0.958 0.970 0.958 0.953 0.905 0.948 0.948 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
51. K04D7.1 rack-1 48949 7.584 0.915 0.950 0.958 0.950 0.938 0.950 0.962 0.961 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
52. F45H11.2 ned-8 13247 7.584 0.945 0.928 0.943 0.928 0.943 0.960 0.970 0.967 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
53. ZK637.3 lnkn-1 16095 7.583 0.950 0.948 0.951 0.948 0.956 0.955 0.908 0.967 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
54. T11G6.1 hars-1 7908 7.583 0.961 0.958 0.951 0.958 0.936 0.921 0.939 0.959 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
55. Y113G7B.23 swsn-1 13766 7.583 0.949 0.949 0.912 0.949 0.936 0.969 0.960 0.959 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
56. F26F4.10 rars-1 9971 7.58 0.959 0.919 0.966 0.919 0.948 0.965 0.960 0.944 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
57. F58D5.1 hrp-2 17211 7.579 0.962 0.953 0.961 0.953 0.950 0.933 0.941 0.926 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
58. M106.4 gmps-1 12232 7.576 0.928 0.948 0.957 0.948 0.970 0.964 0.938 0.923 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
59. D1007.12 rpl-24.1 73724 7.576 0.914 0.942 0.940 0.942 0.971 0.964 0.966 0.937 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
60. Y116A8C.35 uaf-2 13808 7.574 0.946 0.950 0.944 0.950 0.960 0.954 0.955 0.915 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
61. C53D5.6 imb-3 28921 7.573 0.974 0.957 0.956 0.957 0.946 0.915 0.966 0.902 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
62. C14C10.3 ril-2 5709 7.573 0.946 0.951 0.961 0.951 0.959 0.963 0.943 0.899 RNAi-Induced Longevity [Source:RefSeq peptide;Acc:NP_001256436]
63. F32E10.4 ima-3 35579 7.572 0.952 0.958 0.941 0.958 0.953 0.966 0.921 0.923 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
64. B0511.10 eif-3.E 10041 7.572 0.942 0.940 0.952 0.940 0.946 0.957 0.953 0.942 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
65. C18A3.5 tiar-1 25400 7.572 0.961 0.950 0.937 0.950 0.941 0.948 0.930 0.955 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
66. T17E9.2 nmt-1 8017 7.571 0.931 0.960 0.962 0.960 0.943 0.929 0.940 0.946 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
67. H06H21.3 eif-1.A 40990 7.571 0.958 0.966 0.966 0.966 0.903 0.969 0.941 0.902 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
68. R05D11.3 ran-4 15494 7.57 0.936 0.940 0.949 0.940 0.936 0.957 0.935 0.977 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
69. B0261.4 mrpl-47 8210 7.569 0.943 0.950 0.952 0.950 0.960 0.933 0.960 0.921 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
70. T01G9.6 kin-10 27360 7.565 0.947 0.957 0.958 0.957 0.924 0.967 0.903 0.952 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
71. C25D7.8 otub-1 7941 7.565 0.953 0.938 0.922 0.938 0.962 0.963 0.931 0.958 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
72. C28H8.4 C28H8.4 16252 7.565 0.919 0.936 0.958 0.936 0.964 0.961 0.914 0.977 Putative ER lumen protein-retaining receptor C28H8.4 [Source:UniProtKB/Swiss-Prot;Acc:Q09473]
73. K07A12.7 mrps-15 6325 7.563 0.925 0.943 0.951 0.943 0.971 0.943 0.963 0.924 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
74. C39E9.14 dli-1 5650 7.562 0.896 0.946 0.935 0.946 0.948 0.975 0.944 0.972 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
75. T27E9.7 abcf-2 40273 7.562 0.931 0.948 0.971 0.948 0.930 0.956 0.947 0.931 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
76. H20J04.5 pfd-2 8082 7.562 0.961 0.948 0.955 0.948 0.942 0.936 0.940 0.932 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
77. Y39G10AR.9 Y39G10AR.9 3972 7.56 0.953 0.927 0.973 0.927 0.942 0.952 0.936 0.950
78. W08E3.3 ola-1 20885 7.56 0.955 0.948 0.963 0.948 0.947 0.919 0.914 0.966 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
79. B0025.2 csn-2 5205 7.559 0.941 0.948 0.920 0.948 0.970 0.948 0.961 0.923 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
80. C32E8.2 rpl-13 70096 7.559 0.921 0.946 0.936 0.946 0.953 0.950 0.971 0.936 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
81. ZK1010.1 ubq-2 87842 7.557 0.905 0.959 0.936 0.959 0.921 0.959 0.970 0.948 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
82. F15D4.3 rmo-1 18517 7.556 0.933 0.938 0.935 0.938 0.946 0.975 0.959 0.932
83. W04D2.5 mrps-11 5757 7.555 0.948 0.935 0.960 0.935 0.966 0.921 0.957 0.933 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
84. F54A3.3 cct-3 25183 7.555 0.957 0.959 0.964 0.959 0.949 0.950 0.878 0.939 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
85. T05F1.3 rps-19 88407 7.554 0.924 0.941 0.929 0.941 0.944 0.965 0.960 0.950 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
86. C27D11.1 egl-45 28282 7.553 0.961 0.950 0.968 0.950 0.923 0.936 0.950 0.915 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
87. T10F2.4 prp-19 11298 7.553 0.940 0.957 0.938 0.957 0.953 0.938 0.949 0.921 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
88. W02B12.9 mfn-1 7309 7.552 0.906 0.965 0.945 0.965 0.932 0.975 0.938 0.926 Mitoferrin [Source:UniProtKB/Swiss-Prot;Acc:Q23125]
89. F28H1.3 aars-2 13537 7.552 0.948 0.963 0.936 0.963 0.945 0.930 0.922 0.945 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
90. JC8.3 rpl-12 52728 7.552 0.929 0.935 0.921 0.935 0.966 0.946 0.961 0.959 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
91. R07B7.3 pqn-53 10459 7.551 0.928 0.949 0.969 0.949 0.949 0.948 0.916 0.943 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
92. Y39A1C.3 cey-4 50694 7.551 0.946 0.939 0.953 0.939 0.941 0.948 0.939 0.946 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
93. T10B5.5 cct-7 24616 7.551 0.970 0.955 0.945 0.955 0.942 0.941 0.900 0.943 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
94. K11D12.2 pqn-51 15951 7.551 0.929 0.953 0.912 0.953 0.966 0.972 0.923 0.943 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
95. F53G2.7 mnat-1 10966 7.548 0.942 0.956 0.977 0.956 0.941 0.946 0.885 0.945 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
96. T16G1.11 eif-3.K 14014 7.547 0.962 0.941 0.941 0.941 0.939 0.930 0.966 0.927 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
97. T12E12.4 drp-1 7694 7.546 0.937 0.957 0.902 0.957 0.942 0.983 0.927 0.941 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
98. T21B10.1 mrpl-50 14595 7.545 0.951 0.959 0.963 0.959 0.958 0.911 0.907 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
99. C56C10.8 icd-1 89788 7.545 0.938 0.939 0.947 0.939 0.934 0.942 0.955 0.951 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
100. F33D11.11 vpr-1 18001 7.544 0.919 0.950 0.911 0.950 0.932 0.977 0.933 0.972 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]

There are 1231 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA