C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for JC8.3

Gene ID Gene Name Reads Transcripts Annotation
JC8.3 rpl-12 52728 JC8.3a, JC8.3b, JC8.3c.1, JC8.3c.2, JC8.3c.3, JC8.3c.4, JC8.3c.5, JC8.3c.6, JC8.3c.7 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]

Genes with expression patterns similar to JC8.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. JC8.3 rpl-12 52728 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
2. C32E8.2 rpl-13 70096 7.911 0.977 0.989 0.986 0.989 0.996 0.991 0.993 0.990 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
3. K04D7.1 rack-1 48949 7.908 0.987 0.986 0.974 0.986 0.991 0.991 0.996 0.997 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
4. D1007.12 rpl-24.1 73724 7.904 0.987 0.984 0.989 0.984 0.995 0.984 0.996 0.985 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
5. C53H9.1 rpl-27 59496 7.898 0.979 0.982 0.981 0.982 0.993 0.992 0.996 0.993 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
6. T05F1.3 rps-19 88407 7.895 0.991 0.988 0.984 0.988 0.986 0.975 0.991 0.992 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
7. Y43B11AR.4 rps-4 76546 7.886 0.989 0.973 0.986 0.973 0.997 0.988 0.991 0.989 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
8. C09D4.5 rpl-19 56944 7.884 0.988 0.984 0.965 0.984 0.993 0.983 0.991 0.996 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
9. Y37E3.7 rla-1 55876 7.882 0.984 0.987 0.972 0.987 0.989 0.981 0.987 0.995 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
10. T05E11.1 rps-5 79298 7.881 0.988 0.982 0.979 0.982 0.979 0.989 0.993 0.989 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
11. K04D7.2 mspn-1 48187 7.879 0.989 0.985 0.964 0.985 0.992 0.980 0.991 0.993 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
12. F17C11.9 eef-1G 37911 7.875 0.980 0.986 0.978 0.986 0.983 0.984 0.988 0.990 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
13. R11D1.8 rpl-28 62242 7.873 0.986 0.982 0.971 0.982 0.987 0.989 0.991 0.985 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
14. F53A3.3 rps-22 81093 7.87 0.982 0.978 0.976 0.978 0.996 0.975 0.993 0.992 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
15. C27A2.2 rpl-22 63091 7.861 0.974 0.975 0.977 0.975 0.985 0.993 0.992 0.990 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
16. ZK652.4 rpl-35 89991 7.861 0.982 0.976 0.974 0.976 0.974 0.989 0.995 0.995 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
17. B0336.9 swp-1 52442 7.858 0.982 0.981 0.965 0.981 0.994 0.978 0.988 0.989 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
18. F37C12.11 rps-21 62646 7.856 0.979 0.972 0.975 0.972 0.992 0.988 0.991 0.987 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
19. F56F3.5 rps-1 85503 7.848 0.977 0.983 0.974 0.983 0.979 0.977 0.986 0.989 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
20. F25H2.11 tct-1 41796 7.848 0.981 0.983 0.974 0.983 0.993 0.970 0.976 0.988 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
21. C26F1.4 rps-30 77534 7.844 0.981 0.978 0.973 0.978 0.990 0.982 0.969 0.993 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
22. F25H5.4 eef-2 34846 7.843 0.976 0.979 0.973 0.979 0.989 0.975 0.986 0.986 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
23. C23G10.3 rps-3 69779 7.837 0.976 0.979 0.968 0.979 0.982 0.987 0.987 0.979 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
24. Y41D4B.5 rps-28 46003 7.833 0.974 0.959 0.977 0.959 0.996 0.991 0.987 0.990 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
25. ZK1010.1 ubq-2 87842 7.829 0.966 0.981 0.979 0.981 0.975 0.982 0.974 0.991 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
26. H06I04.4 ubl-1 57718 7.823 0.979 0.977 0.977 0.977 0.983 0.978 0.980 0.972 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
27. B0393.1 rps-0 89081 7.82 0.986 0.979 0.956 0.979 0.980 0.954 0.991 0.995 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
28. C56C10.8 icd-1 89788 7.82 0.968 0.970 0.971 0.970 0.984 0.986 0.989 0.982 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
29. M01F1.2 rpl-16 99563 7.816 0.984 0.979 0.974 0.979 0.980 0.933 0.995 0.992 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
30. F54H12.6 eef-1B.1 37095 7.816 0.972 0.976 0.963 0.976 0.993 0.964 0.986 0.986 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
31. F53G12.10 rpl-7 78552 7.814 0.974 0.974 0.955 0.974 0.987 0.983 0.983 0.984 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
32. F25H2.10 rla-0 79986 7.813 0.992 0.980 0.989 0.980 0.985 0.905 0.992 0.990 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
33. T08B2.10 rps-17 38071 7.811 0.977 0.966 0.977 0.966 0.996 0.978 0.971 0.980 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
34. R151.3 rpl-6 89081 7.806 0.979 0.987 0.977 0.987 0.974 0.920 0.989 0.993 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
35. Y57G11C.16 rps-18 76576 7.801 0.977 0.986 0.973 0.986 0.995 0.931 0.962 0.991 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
36. F28D1.7 rps-23 93860 7.801 0.975 0.977 0.969 0.977 0.984 0.937 0.988 0.994 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
37. Y62E10A.1 rla-2 59665 7.799 0.974 0.970 0.970 0.970 0.993 0.948 0.992 0.982 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
38. C54C6.1 rpl-37 24379 7.778 0.958 0.965 0.964 0.965 0.993 0.971 0.978 0.984 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
39. C16A3.9 rps-13 82192 7.769 0.982 0.975 0.974 0.975 0.994 0.884 0.990 0.995 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
40. B0412.4 rps-29 35461 7.765 0.973 0.939 0.968 0.939 0.991 0.976 0.990 0.989 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
41. Y106G6H.3 rpl-30 54860 7.764 0.970 0.962 0.933 0.962 0.991 0.987 0.980 0.979 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
42. R13A5.8 rpl-9 140064 7.763 0.967 0.971 0.962 0.971 0.958 0.951 0.993 0.990 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
43. Y48B6A.2 rpl-43 104489 7.755 0.967 0.986 0.974 0.986 0.975 0.910 0.983 0.974 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
44. Y39A1C.3 cey-4 50694 7.752 0.965 0.973 0.961 0.973 0.974 0.960 0.956 0.990 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
45. B0513.3 rpl-29 102432 7.751 0.951 0.969 0.972 0.969 0.982 0.940 0.985 0.983 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
46. F37C12.9 rps-14 106692 7.748 0.952 0.974 0.962 0.974 0.979 0.926 0.991 0.990 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
47. B0464.1 dars-1 12331 7.745 0.968 0.955 0.957 0.955 0.983 0.989 0.979 0.959 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
48. C26F1.9 rpl-39 51628 7.739 0.953 0.939 0.963 0.939 0.991 0.988 0.984 0.982 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
49. F40F8.10 rps-9 105818 7.732 0.968 0.989 0.960 0.989 0.870 0.988 0.977 0.991 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
50. Y18D10A.19 fkb-2 48128 7.725 0.967 0.967 0.943 0.967 0.979 0.958 0.978 0.966 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
51. C09H10.2 rpl-41 94057 7.724 0.970 0.965 0.974 0.965 0.983 0.909 0.995 0.963 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
52. F39B2.6 rps-26 137659 7.716 0.970 0.987 0.964 0.987 0.877 0.971 0.979 0.981 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
53. T27F7.3 eif-1 28176 7.707 0.958 0.949 0.955 0.949 0.973 0.986 0.956 0.981 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
54. C42C1.14 rpl-34 146539 7.706 0.969 0.970 0.966 0.970 0.926 0.939 0.983 0.983 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
55. C14B9.7 rpl-21 118616 7.703 0.965 0.989 0.983 0.989 0.854 0.935 0.991 0.997 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
56. T24B8.1 rpl-32 67285 7.701 0.985 0.973 0.971 0.973 0.992 0.830 0.986 0.991 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
57. Y65B4BR.5 icd-2 58321 7.699 0.971 0.962 0.935 0.962 0.975 0.965 0.965 0.964 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
58. Y24D9A.4 rpl-7A 176639 7.695 0.931 0.980 0.949 0.980 0.942 0.950 0.969 0.994 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
59. Y105E8A.16 rps-20 146067 7.693 0.981 0.975 0.978 0.975 0.859 0.963 0.973 0.989 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
60. D2013.7 eif-3.F 21004 7.693 0.957 0.960 0.931 0.960 0.983 0.954 0.959 0.989 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
61. T24H7.1 phb-2 28775 7.687 0.980 0.961 0.964 0.961 0.986 0.897 0.964 0.974 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
62. F54C9.5 rpl-5 99313 7.685 0.988 0.976 0.980 0.976 0.870 0.914 0.990 0.991 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
63. F36A2.6 rps-15 147653 7.681 0.931 0.986 0.969 0.986 0.914 0.937 0.985 0.973 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
64. Y40B1B.5 eif-3.J 15061 7.68 0.946 0.952 0.924 0.952 0.987 0.971 0.970 0.978 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
65. T21C9.12 scpl-4 14723 7.679 0.952 0.966 0.964 0.966 0.982 0.948 0.955 0.946 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
66. Y37E3.9 phb-1 29211 7.678 0.969 0.961 0.961 0.961 0.964 0.915 0.961 0.986 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
67. Y37E3.10 Y37E3.10 6492 7.677 0.975 0.938 0.981 0.938 0.978 0.889 0.983 0.995
68. D1007.6 rps-10 142465 7.675 0.970 0.968 0.945 0.968 0.904 0.950 0.986 0.984 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
69. F28C6.7 rpl-26 113192 7.675 0.984 0.985 0.958 0.985 0.841 0.936 0.994 0.992 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
70. T07A9.9 nog-1 19728 7.672 0.900 0.972 0.950 0.972 0.972 0.985 0.970 0.951 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
71. F26D10.3 hsp-1 98277 7.67 0.961 0.966 0.924 0.966 0.939 0.981 0.951 0.982 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
72. K08F11.3 cif-1 10218 7.67 0.956 0.947 0.924 0.947 0.981 0.970 0.978 0.967 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
73. K11H12.2 rpl-15 96281 7.664 0.980 0.988 0.982 0.988 0.974 0.784 0.977 0.991 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
74. F37C12.4 rpl-36 126906 7.659 0.975 0.962 0.965 0.962 0.889 0.942 0.983 0.981 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
75. F57B9.5 byn-1 58236 7.657 0.964 0.964 0.954 0.964 0.967 0.949 0.942 0.953 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
76. Y71F9AL.13 rpl-1 143484 7.656 0.978 0.974 0.965 0.974 0.856 0.919 0.993 0.997 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
77. K02B2.5 rps-25 118421 7.654 0.974 0.974 0.958 0.974 0.857 0.939 0.984 0.994 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
78. R144.7 larp-1 24669 7.653 0.966 0.961 0.898 0.961 0.989 0.972 0.953 0.953 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
79. K07A12.7 mrps-15 6325 7.652 0.956 0.942 0.946 0.942 0.977 0.977 0.981 0.931 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
80. T16G1.11 eif-3.K 14014 7.651 0.951 0.956 0.918 0.956 0.983 0.947 0.979 0.961 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
81. F13B10.2 rpl-3 171741 7.651 0.967 0.973 0.977 0.973 0.844 0.940 0.988 0.989 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
82. B0250.1 rpl-2 100592 7.649 0.983 0.975 0.987 0.975 0.969 0.784 0.987 0.989 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
83. F52B5.6 rpl-25.2 100512 7.649 0.972 0.971 0.948 0.971 0.907 0.925 0.982 0.973 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
84. Y71A12B.1 rps-6 123721 7.649 0.972 0.988 0.972 0.988 0.836 0.915 0.987 0.991 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
85. Y106G6H.2 pab-1 96744 7.648 0.967 0.982 0.958 0.982 0.824 0.989 0.965 0.981 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
86. C06B8.8 rpl-38 109834 7.644 0.964 0.973 0.980 0.973 0.853 0.944 0.978 0.979 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
87. W10D9.5 tomm-22 7396 7.642 0.955 0.933 0.961 0.933 0.989 0.938 0.978 0.955 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
88. C49H3.11 rps-2 152343 7.642 0.968 0.969 0.870 0.969 0.971 0.911 0.991 0.993 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
89. Y45F10D.12 rpl-18 104658 7.635 0.976 0.979 0.959 0.979 0.825 0.936 0.991 0.990 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
90. H21P03.1 mbf-1 25586 7.635 0.965 0.950 0.941 0.950 0.976 0.925 0.951 0.977 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
91. F42C5.8 rps-8 171967 7.631 0.945 0.972 0.959 0.972 0.923 0.902 0.987 0.971 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
92. Y22D7AL.5 hsp-60 42542 7.631 0.939 0.947 0.933 0.947 0.983 0.940 0.973 0.969 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
93. ZC434.2 rps-7 142021 7.629 0.964 0.980 0.956 0.980 0.837 0.932 0.985 0.995 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
94. C37H5.8 hsp-6 22718 7.628 0.963 0.948 0.969 0.948 0.975 0.941 0.911 0.973 Heat shock 70 kDa protein F, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P11141]
95. F56D12.5 vig-1 42594 7.628 0.961 0.958 0.944 0.958 0.978 0.930 0.969 0.930 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
96. R74.1 lars-1 8467 7.628 0.958 0.974 0.946 0.974 0.973 0.910 0.922 0.971 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
97. T27E9.7 abcf-2 40273 7.627 0.961 0.973 0.918 0.973 0.951 0.943 0.946 0.962 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
98. H06H21.3 eif-1.A 40990 7.625 0.977 0.965 0.952 0.965 0.929 0.963 0.931 0.943 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
99. D2096.8 nap-1 59459 7.623 0.972 0.979 0.966 0.979 0.951 0.931 0.923 0.922 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
100. Y48G8AL.8 rpl-17 77686 7.621 0.989 0.979 0.983 0.979 0.821 0.903 0.981 0.986 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]

There are 1351 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA