C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for ZK1128.6

Gene ID Gene Name Reads Transcripts Annotation
ZK1128.6 ttll-4 6059 ZK1128.6a, ZK1128.6b.1, ZK1128.6b.2 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]

Genes with expression patterns similar to ZK1128.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK1128.6 ttll-4 6059 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
2. Y37D8A.9 mrg-1 14369 7.804 0.959 0.981 0.983 0.981 0.987 0.976 0.969 0.968 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
3. Y71G12B.9 lin-65 7476 7.752 0.933 0.987 0.959 0.987 0.990 0.966 0.973 0.957 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
4. Y53C12B.3 nos-3 20231 7.749 0.935 0.987 0.974 0.987 0.979 0.954 0.959 0.974 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
5. Y116A8C.42 snr-1 17062 7.746 0.950 0.986 0.970 0.986 0.983 0.966 0.947 0.958 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
6. F59A2.1 npp-9 34375 7.744 0.965 0.978 0.960 0.978 0.983 0.976 0.950 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
7. K07A1.12 lin-53 15817 7.737 0.955 0.983 0.983 0.983 0.984 0.950 0.932 0.967 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
8. Y14H12B.2 Y14H12B.2 6496 7.737 0.958 0.974 0.982 0.974 0.984 0.963 0.942 0.960
9. F21C3.4 rde-2 6286 7.731 0.932 0.984 0.962 0.984 0.979 0.987 0.930 0.973
10. Y41D4B.19 npp-8 12992 7.73 0.956 0.983 0.981 0.983 0.982 0.957 0.950 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
11. K08F4.2 gtbp-1 25222 7.729 0.947 0.978 0.964 0.978 0.975 0.988 0.924 0.975 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
12. T28D9.2 rsp-5 6460 7.726 0.955 0.980 0.974 0.980 0.985 0.967 0.942 0.943 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
13. Y23H5B.6 Y23H5B.6 5886 7.713 0.945 0.983 0.958 0.983 0.974 0.972 0.940 0.958
14. Y37D8A.11 cec-7 8801 7.711 0.932 0.987 0.977 0.987 0.983 0.985 0.951 0.909 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
15. F56D2.6 ddx-15 12282 7.711 0.926 0.991 0.975 0.991 0.956 0.971 0.924 0.977 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
16. C26D10.1 ran-3 11111 7.71 0.956 0.981 0.943 0.981 0.953 0.973 0.972 0.951 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
17. F58E10.3 ddx-17 15107 7.709 0.952 0.989 0.976 0.989 0.941 0.968 0.930 0.964 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
18. Y55F3AM.12 dcap-1 8679 7.706 0.931 0.986 0.975 0.986 0.990 0.959 0.932 0.947 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
19. R07E5.14 rnp-4 11659 7.704 0.948 0.979 0.967 0.979 0.982 0.948 0.931 0.970 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
20. ZK1251.9 dcaf-1 10926 7.701 0.933 0.979 0.972 0.979 0.982 0.953 0.962 0.941 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
21. C41C4.6 ulp-4 13338 7.698 0.912 0.981 0.971 0.981 0.981 0.958 0.966 0.948 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
22. F32H2.1 snpc-4 7581 7.693 0.950 0.975 0.965 0.975 0.955 0.977 0.926 0.970 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
23. C04G2.6 dis-3 5048 7.691 0.943 0.979 0.971 0.979 0.974 0.991 0.958 0.896 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
24. F23F1.1 nfyc-1 9983 7.687 0.957 0.978 0.970 0.978 0.982 0.963 0.928 0.931 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
25. F26B1.3 ima-2 18826 7.687 0.940 0.964 0.980 0.964 0.984 0.956 0.952 0.947 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
26. B0035.12 sart-3 7188 7.684 0.973 0.981 0.960 0.981 0.990 0.962 0.932 0.905 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
27. Y39E4B.2 snpc-1.2 5800 7.683 0.928 0.984 0.981 0.984 0.980 0.951 0.941 0.934 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
28. F32A5.7 lsm-4 3785 7.683 0.965 0.975 0.967 0.975 0.957 0.959 0.920 0.965 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
29. C34E10.2 gop-2 5684 7.682 0.961 0.983 0.961 0.983 0.981 0.966 0.901 0.946 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
30. C26E6.4 rpb-2 7053 7.68 0.942 0.983 0.955 0.983 0.953 0.970 0.935 0.959 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
31. C02F5.4 cids-1 3125 7.679 0.934 0.959 0.960 0.959 0.960 0.991 0.965 0.951 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
32. C01F6.8 icln-1 6586 7.674 0.943 0.973 0.968 0.973 0.976 0.964 0.947 0.930 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
33. T23H2.1 npp-12 12425 7.673 0.948 0.979 0.969 0.979 0.953 0.969 0.920 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
34. R06A4.4 imb-2 10302 7.669 0.936 0.970 0.982 0.970 0.971 0.947 0.913 0.980 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
35. T19B4.2 npp-7 13073 7.668 0.945 0.980 0.981 0.980 0.943 0.928 0.955 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
36. Y54E5A.6 Y54E5A.6 770 7.665 0.929 0.963 0.956 0.963 0.980 0.973 0.935 0.966
37. Y37E3.15 npp-13 7250 7.665 0.966 0.972 0.953 0.972 0.968 0.931 0.948 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
38. R06F6.1 cdl-1 14167 7.664 0.896 0.975 0.974 0.975 0.986 0.966 0.943 0.949 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
39. F14B4.3 rpoa-2 7549 7.663 0.902 0.976 0.961 0.976 0.986 0.980 0.953 0.929 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
40. T28D9.10 snr-3 9995 7.662 0.942 0.976 0.906 0.976 0.973 0.983 0.945 0.961 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
41. C06A1.5 rpb-6 7515 7.659 0.950 0.963 0.925 0.963 0.979 0.978 0.935 0.966 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
42. T21B10.7 cct-2 13999 7.655 0.953 0.961 0.959 0.961 0.977 0.973 0.915 0.956 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
43. T23B5.1 prmt-3 10677 7.655 0.945 0.965 0.984 0.965 0.962 0.942 0.949 0.943 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
44. Y39G10AR.13 icp-1 3445 7.655 0.928 0.957 0.972 0.957 0.972 0.979 0.960 0.930 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
45. Y47D3A.26 smc-3 6256 7.654 0.924 0.974 0.978 0.974 0.983 0.958 0.916 0.947 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
46. W08E3.1 snr-2 14849 7.654 0.956 0.981 0.957 0.981 0.949 0.953 0.914 0.963 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
47. Y62E10A.12 lsm-3 4322 7.653 0.942 0.962 0.947 0.962 0.975 0.978 0.930 0.957 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
48. F52C9.7 mog-3 9880 7.653 0.954 0.966 0.983 0.966 0.983 0.935 0.931 0.935 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
49. Y54E5A.4 npp-4 6288 7.652 0.927 0.986 0.986 0.986 0.964 0.913 0.924 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
50. F09G2.9 attf-2 14771 7.651 0.953 0.988 0.967 0.988 0.964 0.964 0.890 0.937 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
51. K01G5.2 hpl-2 6781 7.651 0.949 0.975 0.970 0.975 0.968 0.960 0.910 0.944 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
52. Y40B1B.6 spr-5 6252 7.651 0.930 0.977 0.986 0.977 0.974 0.974 0.943 0.890 Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
53. K01G5.4 ran-1 32379 7.65 0.966 0.979 0.950 0.979 0.939 0.958 0.925 0.954 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
54. F53A2.4 nud-1 7818 7.649 0.919 0.980 0.957 0.980 0.987 0.977 0.921 0.928 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
55. T10G3.6 gut-2 3374 7.649 0.910 0.968 0.969 0.968 0.971 0.945 0.970 0.948
56. ZK742.1 xpo-1 20741 7.649 0.934 0.979 0.965 0.979 0.969 0.942 0.920 0.961 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
57. Y18D10A.16 Y18D10A.16 2881 7.649 0.953 0.938 0.986 0.938 0.966 0.968 0.955 0.945
58. C18E9.3 szy-20 6819 7.649 0.941 0.983 0.964 0.983 0.978 0.954 0.942 0.904 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
59. T21B10.1 mrpl-50 14595 7.647 0.947 0.982 0.942 0.982 0.951 0.976 0.916 0.951 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
60. Y43F4B.3 set-25 8036 7.646 0.935 0.972 0.972 0.972 0.976 0.960 0.942 0.917 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
61. F42A6.7 hrp-1 28201 7.646 0.963 0.974 0.985 0.974 0.930 0.944 0.917 0.959 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
62. F10E9.7 F10E9.7 1842 7.646 0.957 0.941 0.961 0.941 0.974 0.964 0.957 0.951
63. F44G4.4 tdp-1 3335 7.645 0.916 0.965 0.965 0.965 0.984 0.976 0.936 0.938 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
64. W01A8.5 tofu-5 5678 7.644 0.932 0.975 0.966 0.975 0.988 0.944 0.927 0.937 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
65. C34E10.5 prmt-5 12277 7.644 0.932 0.984 0.965 0.984 0.946 0.959 0.915 0.959 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
66. Y71F9B.4 snr-7 13542 7.641 0.931 0.971 0.927 0.971 0.987 0.978 0.911 0.965 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
67. F28H1.3 aars-2 13537 7.641 0.953 0.978 0.970 0.978 0.952 0.940 0.918 0.952 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
68. R12C12.2 ran-5 14517 7.641 0.951 0.978 0.966 0.978 0.956 0.920 0.959 0.933 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
69. W06E11.4 sbds-1 6701 7.64 0.922 0.973 0.941 0.973 0.982 0.977 0.926 0.946 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
70. K04G2.2 aho-3 15189 7.64 0.939 0.967 0.986 0.967 0.984 0.921 0.922 0.954
71. F43G9.5 cfim-1 9169 7.64 0.933 0.979 0.982 0.979 0.981 0.936 0.888 0.962 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
72. C30G12.7 puf-8 5785 7.639 0.922 0.975 0.962 0.975 0.956 0.978 0.948 0.923 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
73. F01F1.8 cct-6 29460 7.638 0.946 0.978 0.956 0.978 0.959 0.970 0.897 0.954 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
74. C26E6.7 eri-9 8069 7.638 0.937 0.979 0.941 0.979 0.985 0.941 0.937 0.939 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
75. W06H3.3 ctps-1 8363 7.637 0.937 0.955 0.947 0.955 0.975 0.968 0.929 0.971 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
76. Y41D4B.13 ced-2 10100 7.637 0.937 0.966 0.982 0.966 0.975 0.915 0.955 0.941 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
77. F52F12.4 lsl-1 4055 7.637 0.926 0.984 0.943 0.984 0.985 0.946 0.918 0.951 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
78. K11D12.2 pqn-51 15951 7.637 0.930 0.993 0.990 0.993 0.952 0.920 0.913 0.946 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
79. T25G3.4 T25G3.4 9394 7.636 0.923 0.972 0.949 0.972 0.983 0.950 0.958 0.929 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
80. T22C1.3 T22C1.3 2305 7.635 0.949 0.968 0.967 0.968 0.976 0.936 0.922 0.949
81. CC4.3 smu-1 4169 7.634 0.927 0.966 0.967 0.966 0.973 0.963 0.925 0.947 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
82. ZK1010.3 frg-1 3533 7.634 0.952 0.971 0.985 0.971 0.963 0.912 0.954 0.926 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
83. C07H6.5 cgh-1 60576 7.634 0.941 0.952 0.967 0.952 0.978 0.956 0.920 0.968 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
84. C49H3.10 xpo-3 9101 7.634 0.919 0.979 0.967 0.979 0.964 0.969 0.911 0.946 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
85. F53F4.12 F53F4.12 2683 7.632 0.929 0.964 0.942 0.964 0.966 0.985 0.945 0.937
86. F33D4.5 mrpl-1 5337 7.631 0.941 0.978 0.952 0.978 0.979 0.932 0.905 0.966 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
87. H27M09.2 rpb-5 4744 7.63 0.933 0.966 0.933 0.966 0.984 0.952 0.960 0.936 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
88. T09E8.2 him-17 4153 7.627 0.905 0.967 0.967 0.967 0.977 0.968 0.924 0.952 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
89. Y46G5A.4 snrp-200 13827 7.626 0.903 0.979 0.978 0.979 0.959 0.961 0.921 0.946 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
90. Y69A2AR.30 mdf-2 6403 7.625 0.950 0.943 0.971 0.943 0.969 0.964 0.937 0.948 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
91. T26A8.1 T26A8.1 4387 7.625 0.932 0.978 0.960 0.978 0.975 0.967 0.891 0.944
92. R74.8 R74.8 7722 7.624 0.948 0.988 0.957 0.988 0.960 0.946 0.950 0.887
93. K08E7.1 eak-7 18960 7.624 0.924 0.974 0.980 0.974 0.956 0.907 0.933 0.976 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
94. C14A4.4 crn-3 6558 7.619 0.922 0.983 0.945 0.983 0.939 0.957 0.941 0.949 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
95. C48E7.3 lpd-2 10330 7.619 0.948 0.985 0.975 0.985 0.909 0.917 0.942 0.958 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
96. C07E3.2 pro-2 4193 7.618 0.875 0.952 0.942 0.952 0.982 0.986 0.955 0.974 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
97. E02H1.3 tag-124 2189 7.616 0.941 0.970 0.961 0.970 0.974 0.979 0.897 0.924 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
98. C33H5.12 rsp-6 23342 7.616 0.968 0.970 0.982 0.970 0.927 0.961 0.893 0.945 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
99. T23G11.3 gld-1 41748 7.616 0.924 0.977 0.959 0.977 0.976 0.944 0.918 0.941 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
100. C23G10.8 C23G10.8 4642 7.616 0.910 0.982 0.978 0.982 0.976 0.917 0.936 0.935

There are 3295 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA