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Results for R11A8.4

Gene ID Gene Name Reads Transcripts Annotation
R11A8.4 sir-2.1 1895 R11A8.4a, R11A8.4b.1, R11A8.4b.2, R11A8.4b.3 NAD-dependent protein deacetylase sir-2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q21921]

Genes with expression patterns similar to R11A8.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R11A8.4 sir-2.1 1895 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NAD-dependent protein deacetylase sir-2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q21921]
2. C25D7.8 otub-1 7941 7.534 0.925 0.974 0.958 0.974 0.947 0.915 0.879 0.962 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
3. F08F8.3 kap-1 31437 7.53 0.943 0.967 0.949 0.967 0.955 0.927 0.871 0.951 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
4. C18A3.5 tiar-1 25400 7.529 0.920 0.964 0.969 0.964 0.956 0.955 0.880 0.921 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
5. K11D12.2 pqn-51 15951 7.522 0.933 0.963 0.953 0.963 0.946 0.946 0.883 0.935 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
6. H19N07.1 erfa-3 19869 7.513 0.916 0.952 0.945 0.952 0.964 0.944 0.897 0.943 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
7. Y38A8.3 ulp-2 7403 7.511 0.950 0.959 0.975 0.959 0.961 0.877 0.927 0.903 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
8. F56D2.6 ddx-15 12282 7.506 0.937 0.943 0.959 0.943 0.952 0.923 0.905 0.944 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
9. K03H1.2 mog-1 4057 7.505 0.902 0.967 0.970 0.967 0.923 0.930 0.915 0.931 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
10. F49D11.1 prp-17 5338 7.496 0.940 0.944 0.948 0.944 0.919 0.940 0.894 0.967 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
11. Y62E10A.11 mdt-9 5971 7.495 0.942 0.976 0.961 0.976 0.891 0.922 0.868 0.959 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
12. C15H11.4 dhs-22 21674 7.494 0.923 0.975 0.950 0.975 0.961 0.947 0.831 0.932 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
13. K01G5.4 ran-1 32379 7.492 0.919 0.977 0.961 0.977 0.954 0.940 0.837 0.927 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
14. T04A8.14 emb-5 11746 7.492 0.905 0.977 0.971 0.977 0.954 0.904 0.901 0.903 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
15. B0025.2 csn-2 5205 7.49 0.941 0.960 0.961 0.960 0.933 0.910 0.904 0.921 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
16. Y111B2A.18 rsp-3 43731 7.487 0.897 0.966 0.955 0.966 0.945 0.948 0.867 0.943 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
17. R06A4.9 pfs-2 4733 7.486 0.911 0.955 0.962 0.955 0.957 0.898 0.915 0.933 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
18. K06H7.6 apc-2 2979 7.485 0.947 0.984 0.934 0.984 0.964 0.870 0.865 0.937 Anaphase-promoting complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34514]
19. Y54E5A.4 npp-4 6288 7.482 0.929 0.960 0.956 0.960 0.958 0.889 0.904 0.926 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
20. T23H2.1 npp-12 12425 7.482 0.938 0.962 0.962 0.962 0.941 0.913 0.874 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
21. B0285.1 cdk-12 5900 7.48 0.908 0.964 0.970 0.964 0.921 0.924 0.908 0.921 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
22. D2013.2 wdfy-2 7286 7.48 0.920 0.975 0.968 0.975 0.935 0.932 0.832 0.943 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
23. B0035.3 B0035.3 4118 7.478 0.921 0.982 0.963 0.982 0.937 0.899 0.864 0.930
24. R05D11.3 ran-4 15494 7.478 0.880 0.964 0.944 0.964 0.948 0.936 0.908 0.934 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
25. W02F12.6 sna-1 7338 7.477 0.914 0.977 0.958 0.977 0.950 0.912 0.875 0.914 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
26. W02B12.3 rsp-1 9235 7.475 0.927 0.962 0.978 0.962 0.946 0.901 0.879 0.920 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
27. F26F4.10 rars-1 9971 7.472 0.926 0.927 0.958 0.927 0.960 0.939 0.903 0.932 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
28. F32H2.1 snpc-4 7581 7.469 0.939 0.960 0.943 0.960 0.944 0.926 0.853 0.944 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
29. C28H8.9 dpff-1 8684 7.467 0.944 0.957 0.935 0.957 0.947 0.923 0.876 0.928 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
30. T18H9.6 mdt-27 5418 7.466 0.900 0.966 0.954 0.966 0.946 0.889 0.904 0.941 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
31. B0495.6 moa-2 6366 7.465 0.880 0.974 0.972 0.974 0.940 0.909 0.894 0.922
32. F45F2.11 F45F2.11 6741 7.464 0.905 0.960 0.976 0.960 0.933 0.904 0.892 0.934
33. F36A4.7 ama-1 13620 7.461 0.925 0.949 0.961 0.949 0.966 0.941 0.896 0.874 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
34. Y46G5A.4 snrp-200 13827 7.46 0.941 0.936 0.960 0.936 0.950 0.915 0.902 0.920 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
35. C02B10.5 C02B10.5 9171 7.46 0.902 0.959 0.961 0.959 0.960 0.919 0.880 0.920
36. F22D6.3 nars-1 18624 7.458 0.908 0.969 0.939 0.969 0.956 0.942 0.844 0.931 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
37. F54C8.5 rheb-1 6358 7.458 0.869 0.971 0.977 0.971 0.927 0.888 0.903 0.952 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
38. T04A8.10 sel-13 3109 7.457 0.946 0.942 0.955 0.942 0.942 0.894 0.911 0.925 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
39. C39E9.14 dli-1 5650 7.451 0.945 0.964 0.948 0.964 0.926 0.926 0.833 0.945 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
40. ZK328.2 eftu-2 7040 7.45 0.929 0.972 0.966 0.972 0.930 0.876 0.880 0.925 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
41. C36B1.5 prp-4 2714 7.45 0.927 0.942 0.969 0.942 0.943 0.864 0.933 0.930 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
42. F52C9.7 mog-3 9880 7.449 0.890 0.978 0.964 0.978 0.924 0.881 0.907 0.927 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
43. F33D4.5 mrpl-1 5337 7.449 0.932 0.948 0.957 0.948 0.906 0.901 0.902 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
44. F59E12.11 sam-4 8179 7.448 0.871 0.974 0.962 0.974 0.912 0.944 0.868 0.943
45. R12C12.2 ran-5 14517 7.448 0.923 0.959 0.983 0.959 0.946 0.886 0.860 0.932 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
46. F42A6.7 hrp-1 28201 7.448 0.907 0.951 0.947 0.951 0.941 0.939 0.880 0.932 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
47. F13G3.4 dylt-1 21345 7.448 0.905 0.937 0.936 0.937 0.960 0.946 0.891 0.936 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
48. R151.9 pfd-5 6951 7.443 0.941 0.956 0.959 0.956 0.919 0.943 0.834 0.935 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
49. K12D12.2 npp-3 6914 7.443 0.933 0.963 0.926 0.963 0.940 0.881 0.906 0.931 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
50. F37E3.1 ncbp-1 5649 7.442 0.931 0.964 0.958 0.964 0.935 0.904 0.863 0.923 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
51. Y37E3.15 npp-13 7250 7.441 0.933 0.951 0.931 0.951 0.937 0.914 0.905 0.919 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
52. T23B5.1 prmt-3 10677 7.44 0.912 0.981 0.972 0.981 0.948 0.896 0.863 0.887 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
53. C50C3.6 prp-8 19582 7.439 0.943 0.953 0.948 0.953 0.956 0.890 0.863 0.933 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
54. D2030.8 D2030.8 2645 7.439 0.934 0.973 0.957 0.973 0.942 0.901 0.822 0.937
55. F28H1.3 aars-2 13537 7.438 0.892 0.941 0.937 0.941 0.948 0.947 0.873 0.959 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
56. Y61A9LA.8 sut-2 11388 7.438 0.923 0.958 0.966 0.958 0.942 0.886 0.899 0.906 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
57. B0261.4 mrpl-47 8210 7.437 0.904 0.953 0.925 0.953 0.947 0.958 0.866 0.931 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
58. T16G1.11 eif-3.K 14014 7.436 0.920 0.951 0.907 0.951 0.964 0.946 0.886 0.911 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
59. F23F1.1 nfyc-1 9983 7.436 0.928 0.970 0.970 0.970 0.905 0.909 0.874 0.910 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
60. Y17G7A.1 hmg-12 29989 7.435 0.933 0.965 0.966 0.965 0.959 0.884 0.855 0.908 HMG [Source:RefSeq peptide;Acc:NP_496544]
61. Y54E2A.3 tac-1 6308 7.434 0.887 0.960 0.957 0.960 0.942 0.885 0.904 0.939 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
62. K08E3.8 mdt-29 4678 7.432 0.918 0.963 0.947 0.963 0.938 0.890 0.895 0.918 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
63. C34E10.5 prmt-5 12277 7.431 0.933 0.932 0.957 0.932 0.955 0.907 0.912 0.903 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
64. ZK856.13 tftc-3 2960 7.429 0.888 0.959 0.963 0.959 0.938 0.908 0.916 0.898 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
65. T10F2.4 prp-19 11298 7.429 0.902 0.958 0.958 0.958 0.943 0.884 0.894 0.932 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
66. T03F6.2 dnj-17 3150 7.427 0.947 0.967 0.885 0.967 0.878 0.938 0.899 0.946 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_499759]
67. T05E8.3 let-355 8169 7.426 0.917 0.964 0.960 0.964 0.964 0.884 0.868 0.905
68. C27B7.1 spr-2 14958 7.425 0.881 0.973 0.973 0.973 0.957 0.846 0.909 0.913 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
69. R144.4 wip-1 14168 7.423 0.860 0.971 0.964 0.971 0.922 0.909 0.893 0.933 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
70. T11G6.1 hars-1 7908 7.423 0.912 0.938 0.922 0.938 0.941 0.975 0.839 0.958 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
71. C43H8.2 mafr-1 5790 7.421 0.919 0.929 0.963 0.929 0.931 0.914 0.893 0.943 Repressor of RNA polymerase III transcription MAF1 [Source:RefSeq peptide;Acc:NP_492777]
72. T19B4.2 npp-7 13073 7.42 0.908 0.970 0.944 0.970 0.941 0.860 0.880 0.947 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
73. ZK742.1 xpo-1 20741 7.419 0.868 0.955 0.960 0.955 0.945 0.911 0.862 0.963 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
74. Y56A3A.20 ccf-1 18463 7.419 0.906 0.965 0.951 0.965 0.924 0.929 0.863 0.916 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
75. F10G8.3 rae-1 7542 7.417 0.922 0.965 0.962 0.965 0.945 0.876 0.892 0.890 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
76. F36F2.3 rbpl-1 15376 7.417 0.924 0.961 0.950 0.961 0.947 0.866 0.857 0.951 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
77. C52E4.6 cyl-1 6405 7.417 0.908 0.948 0.955 0.948 0.942 0.890 0.894 0.932 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
78. F59G1.3 vps-35 9577 7.417 0.941 0.964 0.968 0.964 0.950 0.921 0.806 0.903 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
79. T26A5.5 jhdm-1 12698 7.415 0.936 0.961 0.970 0.961 0.949 0.872 0.853 0.913 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
80. T10B5.5 cct-7 24616 7.414 0.918 0.937 0.935 0.937 0.932 0.948 0.839 0.968 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
81. C36B1.8 gls-1 8617 7.414 0.913 0.952 0.964 0.952 0.923 0.908 0.867 0.935 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
82. E01A2.4 let-504 9788 7.414 0.918 0.962 0.968 0.962 0.944 0.859 0.894 0.907
83. Y65B4BL.2 deps-1 18277 7.413 0.931 0.970 0.970 0.970 0.965 0.848 0.875 0.884
84. Y39G10AR.9 Y39G10AR.9 3972 7.412 0.923 0.969 0.903 0.969 0.949 0.942 0.830 0.927
85. Y37A1B.1 lst-3 10739 7.412 0.939 0.955 0.950 0.955 0.931 0.885 0.862 0.935 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
86. F09D1.1 usp-39 2037 7.412 0.910 0.953 0.947 0.953 0.926 0.940 0.838 0.945 Ubiquitin Specific Protease [Source:RefSeq peptide;Acc:NP_494298]
87. C08B11.5 sap-49 10553 7.411 0.901 0.950 0.927 0.950 0.960 0.904 0.883 0.936 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
88. C10C5.6 daf-15 8724 7.411 0.864 0.969 0.951 0.969 0.932 0.912 0.893 0.921 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
89. C36B1.3 rpb-3 4442 7.41 0.911 0.966 0.983 0.966 0.952 0.882 0.851 0.899 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
90. Y71G12B.9 lin-65 7476 7.407 0.923 0.959 0.963 0.959 0.917 0.899 0.862 0.925 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
91. T14B4.3 T14B4.3 2875 7.406 0.901 0.965 0.946 0.965 0.948 0.910 0.861 0.910
92. D1022.1 ubc-6 9722 7.406 0.879 0.957 0.934 0.957 0.953 0.902 0.902 0.922 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
93. B0464.7 baf-1 10161 7.405 0.892 0.959 0.929 0.959 0.918 0.953 0.873 0.922 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
94. Y53C12B.3 nos-3 20231 7.405 0.945 0.962 0.954 0.962 0.916 0.900 0.834 0.932 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
95. Y113G7B.23 swsn-1 13766 7.404 0.912 0.975 0.951 0.975 0.931 0.916 0.818 0.926 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
96. F01F1.4 rabn-5 5269 7.402 0.881 0.960 0.934 0.960 0.928 0.947 0.867 0.925 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
97. W04D2.5 mrps-11 5757 7.402 0.917 0.960 0.934 0.960 0.934 0.907 0.911 0.879 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
98. F28B3.7 him-1 18274 7.402 0.935 0.951 0.975 0.951 0.942 0.910 0.874 0.864 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
99. C05C8.6 hpo-9 8263 7.401 0.942 0.968 0.969 0.968 0.934 0.843 0.892 0.885
100. K01G5.1 rnf-113 4336 7.4 0.937 0.963 0.936 0.963 0.900 0.908 0.846 0.947 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA