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Results for F09D1.1

Gene ID Gene Name Reads Transcripts Annotation
F09D1.1 usp-39 2037 F09D1.1 Ubiquitin Specific Protease [Source:RefSeq peptide;Acc:NP_494298]

Genes with expression patterns similar to F09D1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F09D1.1 usp-39 2037 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ubiquitin Specific Protease [Source:RefSeq peptide;Acc:NP_494298]
2. F37E3.1 ncbp-1 5649 7.647 0.952 0.970 0.967 0.970 0.957 0.970 0.968 0.893 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
3. K12D12.2 npp-3 6914 7.59 0.956 0.938 0.930 0.938 0.978 0.976 0.953 0.921 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
4. K02F2.3 teg-4 3873 7.582 0.955 0.961 0.958 0.961 0.952 0.984 0.925 0.886 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
5. C17E4.10 C17E4.10 7034 7.579 0.934 0.941 0.959 0.941 0.966 0.967 0.963 0.908
6. F56D2.6 ddx-15 12282 7.574 0.924 0.945 0.967 0.945 0.928 0.972 0.958 0.935 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
7. K01G5.4 ran-1 32379 7.565 0.920 0.954 0.964 0.954 0.944 0.976 0.931 0.922 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
8. F28D9.1 rsr-1 4282 7.564 0.944 0.949 0.955 0.949 0.931 0.966 0.949 0.921 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
9. C43E11.1 acin-1 7781 7.563 0.924 0.943 0.972 0.943 0.961 0.971 0.956 0.893 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
10. C18G1.5 hil-4 21692 7.562 0.940 0.935 0.954 0.935 0.956 0.968 0.968 0.906 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
11. Y65B4BL.2 deps-1 18277 7.562 0.964 0.953 0.977 0.953 0.954 0.943 0.959 0.859
12. C36B1.8 gls-1 8617 7.558 0.947 0.941 0.957 0.941 0.952 0.953 0.971 0.896 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
13. F18C5.2 wrn-1 3792 7.557 0.935 0.967 0.974 0.967 0.905 0.961 0.941 0.907 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
14. K03H1.2 mog-1 4057 7.557 0.959 0.955 0.956 0.955 0.898 0.966 0.938 0.930 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
15. F42A6.7 hrp-1 28201 7.555 0.891 0.952 0.963 0.952 0.949 0.973 0.944 0.931 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
16. Y111B2A.18 rsp-3 43731 7.55 0.899 0.966 0.957 0.966 0.946 0.955 0.931 0.930 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
17. ZK973.3 pdp-1 3966 7.549 0.904 0.956 0.961 0.956 0.977 0.918 0.927 0.950 Pyruvate Dehydrogenase Phosphatase homolog [Source:RefSeq peptide;Acc:NP_491357]
18. T05E8.3 let-355 8169 7.544 0.924 0.951 0.942 0.951 0.960 0.955 0.980 0.881
19. C47D12.6 tars-1 23488 7.542 0.895 0.949 0.948 0.949 0.962 0.973 0.945 0.921 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
20. T04A8.14 emb-5 11746 7.54 0.943 0.962 0.956 0.962 0.949 0.941 0.957 0.870 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
21. C28H8.9 dpff-1 8684 7.536 0.938 0.956 0.958 0.956 0.963 0.956 0.924 0.885 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
22. F25B5.2 nop-1 4127 7.534 0.944 0.945 0.972 0.945 0.937 0.962 0.950 0.879 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
23. T09A5.8 cec-3 5813 7.531 0.926 0.954 0.928 0.954 0.919 0.974 0.955 0.921 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
24. Y53H1C.1 aat-9 5713 7.53 0.930 0.928 0.948 0.928 0.951 0.939 0.949 0.957 Amino Acid Transporter [Source:RefSeq peptide;Acc:NP_001021788]
25. ZK328.5 npp-10 7652 7.529 0.955 0.966 0.962 0.966 0.957 0.912 0.891 0.920 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
26. C08B6.7 wdr-20 7575 7.528 0.927 0.936 0.974 0.936 0.981 0.913 0.927 0.934 WD repeat-containing protein 20 homolog [Source:UniProtKB/Swiss-Prot;Acc:D9N129]
27. K02F3.11 rnp-5 6205 7.524 0.921 0.954 0.952 0.954 0.931 0.969 0.919 0.924 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
28. C33H5.12 rsp-6 23342 7.524 0.915 0.947 0.963 0.947 0.944 0.954 0.945 0.909 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
29. T23H2.1 npp-12 12425 7.524 0.942 0.951 0.971 0.951 0.925 0.960 0.942 0.882 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
30. W02B12.3 rsp-1 9235 7.523 0.913 0.932 0.972 0.932 0.953 0.969 0.946 0.906 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
31. Y116A8C.35 uaf-2 13808 7.522 0.886 0.961 0.963 0.961 0.959 0.956 0.918 0.918 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
32. C49C3.7 C49C3.7 3004 7.522 0.907 0.950 0.943 0.950 0.922 0.969 0.944 0.937
33. ZC395.8 ztf-8 5521 7.521 0.963 0.932 0.967 0.932 0.926 0.936 0.914 0.951 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
34. F22D6.3 nars-1 18624 7.52 0.889 0.952 0.925 0.952 0.960 0.969 0.960 0.913 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
35. F26F4.10 rars-1 9971 7.517 0.917 0.934 0.955 0.934 0.962 0.970 0.928 0.917 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
36. C08B11.5 sap-49 10553 7.516 0.864 0.943 0.953 0.943 0.948 0.963 0.959 0.943 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
37. F01G4.3 skih-2 3353 7.515 0.933 0.945 0.979 0.945 0.924 0.951 0.921 0.917 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
38. T07D4.3 rha-1 5898 7.515 0.932 0.942 0.957 0.942 0.946 0.967 0.966 0.863 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
39. F32H2.1 snpc-4 7581 7.513 0.918 0.961 0.951 0.961 0.927 0.972 0.920 0.903 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
40. B0035.3 B0035.3 4118 7.511 0.948 0.950 0.978 0.950 0.932 0.942 0.942 0.869
41. T10F2.4 prp-19 11298 7.508 0.882 0.960 0.956 0.960 0.955 0.941 0.945 0.909 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
42. T08A11.2 T08A11.2 12269 7.508 0.953 0.959 0.950 0.959 0.943 0.935 0.952 0.857
43. D2030.8 D2030.8 2645 7.507 0.864 0.961 0.949 0.961 0.920 0.963 0.933 0.956
44. ZK328.2 eftu-2 7040 7.504 0.922 0.953 0.951 0.953 0.906 0.951 0.958 0.910 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
45. R53.2 dtmk-1 6821 7.503 0.894 0.958 0.953 0.958 0.912 0.938 0.951 0.939 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
46. C50C3.6 prp-8 19582 7.502 0.910 0.950 0.949 0.950 0.949 0.929 0.951 0.914 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
47. F36A4.7 ama-1 13620 7.502 0.914 0.954 0.962 0.954 0.961 0.972 0.911 0.874 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
48. ZK742.1 xpo-1 20741 7.5 0.926 0.951 0.980 0.951 0.906 0.936 0.901 0.949 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
49. T05H4.14 gad-1 7979 7.5 0.928 0.936 0.954 0.936 0.920 0.943 0.926 0.957 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
50. ZK507.6 cya-1 6807 7.5 0.920 0.939 0.962 0.939 0.982 0.950 0.954 0.854 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
51. F52C9.8 pqe-1 7546 7.5 0.962 0.964 0.967 0.964 0.926 0.896 0.941 0.880 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
52. B0464.9 B0464.9 2997 7.499 0.930 0.953 0.952 0.953 0.929 0.962 0.956 0.864 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
53. Y38A8.3 ulp-2 7403 7.499 0.950 0.953 0.949 0.953 0.947 0.962 0.943 0.842 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
54. Y71D11A.2 smr-1 4976 7.498 0.917 0.968 0.964 0.968 0.938 0.921 0.916 0.906 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
55. C03D6.4 npp-14 4889 7.497 0.939 0.955 0.948 0.955 0.957 0.928 0.948 0.867 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
56. T04A8.10 sel-13 3109 7.496 0.940 0.918 0.959 0.918 0.949 0.947 0.968 0.897 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
57. C27B7.1 spr-2 14958 7.496 0.915 0.950 0.966 0.950 0.959 0.922 0.959 0.875 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
58. C18A3.5 tiar-1 25400 7.495 0.929 0.968 0.969 0.968 0.938 0.918 0.923 0.882 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
59. Y17G7A.1 hmg-12 29989 7.493 0.918 0.946 0.969 0.946 0.916 0.954 0.958 0.886 HMG [Source:RefSeq peptide;Acc:NP_496544]
60. T21B10.4 T21B10.4 11648 7.493 0.933 0.936 0.971 0.936 0.907 0.938 0.962 0.910
61. T01G9.4 npp-2 5361 7.492 0.935 0.950 0.947 0.950 0.929 0.943 0.925 0.913 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
62. F32H2.4 thoc-3 3861 7.491 0.944 0.925 0.963 0.925 0.941 0.932 0.957 0.904 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
63. C09H10.6 nasp-1 6094 7.489 0.943 0.929 0.911 0.929 0.958 0.946 0.963 0.910 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
64. F33H2.1 dog-1 2417 7.488 0.961 0.924 0.922 0.924 0.942 0.979 0.950 0.886 Deletions Of G-rich DNA [Source:RefSeq peptide;Acc:NP_493618]
65. Y54E5A.4 npp-4 6288 7.485 0.879 0.965 0.965 0.965 0.919 0.962 0.920 0.910 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
66. Y105E8A.17 ekl-4 4732 7.485 0.938 0.949 0.961 0.949 0.895 0.962 0.951 0.880
67. C34E10.5 prmt-5 12277 7.484 0.899 0.941 0.958 0.941 0.921 0.977 0.967 0.880 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
68. T05F1.6 hsr-9 13312 7.484 0.929 0.962 0.963 0.962 0.953 0.910 0.898 0.907
69. W02F12.6 sna-1 7338 7.483 0.927 0.954 0.956 0.954 0.918 0.971 0.922 0.881 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
70. Y18D10A.1 attf-6 6942 7.483 0.925 0.943 0.953 0.943 0.916 0.955 0.923 0.925 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
71. F49D11.1 prp-17 5338 7.483 0.966 0.939 0.958 0.939 0.890 0.959 0.891 0.941 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
72. Y39G10AR.7 ekl-7 7072 7.482 0.905 0.947 0.981 0.947 0.956 0.962 0.899 0.885
73. Y43F8C.14 ani-3 3013 7.482 0.917 0.950 0.972 0.950 0.936 0.961 0.913 0.883 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
74. R13F6.10 cra-1 11610 7.481 0.889 0.945 0.933 0.945 0.949 0.977 0.947 0.896 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
75. H38K22.1 evl-14 3704 7.481 0.896 0.961 0.937 0.961 0.902 0.950 0.941 0.933
76. C05C8.6 hpo-9 8263 7.479 0.955 0.953 0.956 0.953 0.922 0.934 0.961 0.845
77. K02F2.1 dpf-3 11465 7.479 0.945 0.948 0.967 0.948 0.947 0.919 0.923 0.882 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
78. F32E10.6 cec-5 10643 7.478 0.926 0.924 0.959 0.924 0.929 0.967 0.958 0.891 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
79. C53D5.6 imb-3 28921 7.478 0.881 0.943 0.944 0.943 0.942 0.967 0.937 0.921 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
80. F45F2.11 F45F2.11 6741 7.478 0.944 0.945 0.963 0.945 0.958 0.910 0.946 0.867
81. T17E9.2 nmt-1 8017 7.477 0.816 0.953 0.942 0.953 0.980 0.954 0.943 0.936 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
82. ZK856.13 tftc-3 2960 7.476 0.937 0.963 0.967 0.963 0.876 0.958 0.930 0.882 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
83. B0464.2 ctr-9 7610 7.475 0.898 0.964 0.950 0.964 0.882 0.967 0.956 0.894 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
84. Y46G5A.4 snrp-200 13827 7.475 0.937 0.912 0.965 0.912 0.917 0.974 0.965 0.893 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
85. Y73F8A.34 tag-349 7966 7.475 0.924 0.931 0.970 0.931 0.937 0.957 0.950 0.875
86. C06E7.1 sams-3 26921 7.474 0.910 0.948 0.931 0.948 0.962 0.966 0.934 0.875 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
87. ZK1127.12 ZK1127.12 2029 7.474 0.936 0.947 0.930 0.947 0.976 0.917 0.903 0.918
88. F56D1.7 daz-1 23684 7.473 0.916 0.947 0.973 0.947 0.928 0.944 0.929 0.889 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
89. T27F2.1 skp-1 3532 7.473 0.897 0.919 0.972 0.919 0.963 0.948 0.927 0.928 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
90. R01H10.1 div-1 2477 7.472 0.946 0.943 0.969 0.943 0.911 0.943 0.950 0.867 DNA polymerase alpha subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q21625]
91. Y74C9A.4 rcor-1 4686 7.472 0.935 0.922 0.968 0.922 0.932 0.966 0.941 0.886 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
92. D1081.8 cdc-5L 8553 7.472 0.935 0.925 0.971 0.925 0.969 0.952 0.938 0.857 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
93. T24F1.2 samp-1 8422 7.471 0.927 0.920 0.953 0.920 0.963 0.924 0.970 0.894 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
94. W03F9.5 ttb-1 8682 7.471 0.928 0.969 0.962 0.969 0.929 0.891 0.895 0.928 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
95. Y113G7B.23 swsn-1 13766 7.47 0.914 0.950 0.937 0.950 0.964 0.926 0.916 0.913 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
96. F23F1.1 nfyc-1 9983 7.469 0.935 0.947 0.962 0.947 0.868 0.975 0.946 0.889 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
97. F58D5.1 hrp-2 17211 7.469 0.906 0.950 0.916 0.950 0.946 0.967 0.930 0.904 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
98. Y48G8AL.6 smg-2 12561 7.468 0.903 0.928 0.944 0.928 0.934 0.955 0.928 0.948 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
99. F46B6.3 smg-4 4959 7.468 0.907 0.940 0.934 0.940 0.957 0.928 0.952 0.910 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
100. Y61A9LA.8 sut-2 11388 7.466 0.927 0.951 0.949 0.951 0.937 0.945 0.940 0.866 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA