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Results for ZK856.13

Gene ID Gene Name Reads Transcripts Annotation
ZK856.13 tftc-3 2960 ZK856.13 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]

Genes with expression patterns similar to ZK856.13

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK856.13 tftc-3 2960 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
2. Y65B4BL.2 deps-1 18277 7.673 0.930 0.981 0.982 0.981 0.958 0.970 0.951 0.920
3. F56D2.6 ddx-15 12282 7.669 0.909 0.974 0.973 0.974 0.968 0.985 0.963 0.923 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
4. Y54E5A.4 npp-4 6288 7.662 0.899 0.981 0.981 0.981 0.975 0.953 0.967 0.925 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
5. Y46G5A.4 snrp-200 13827 7.66 0.931 0.955 0.970 0.955 0.980 0.979 0.966 0.924 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
6. F23F1.1 nfyc-1 9983 7.658 0.931 0.970 0.971 0.970 0.966 0.961 0.953 0.936 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
7. F52C9.7 mog-3 9880 7.658 0.917 0.968 0.977 0.968 0.968 0.951 0.978 0.931 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
8. Y17G7A.1 hmg-12 29989 7.658 0.899 0.969 0.964 0.969 0.977 0.981 0.947 0.952 HMG [Source:RefSeq peptide;Acc:NP_496544]
9. F37E3.1 ncbp-1 5649 7.657 0.938 0.982 0.980 0.982 0.927 0.981 0.950 0.917 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
10. T26A5.5 jhdm-1 12698 7.656 0.909 0.986 0.981 0.986 0.966 0.957 0.939 0.932 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
11. Y71G12B.9 lin-65 7476 7.654 0.932 0.978 0.970 0.978 0.974 0.971 0.938 0.913 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
12. D1081.8 cdc-5L 8553 7.651 0.938 0.966 0.992 0.966 0.942 0.972 0.943 0.932 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
13. C27B7.1 spr-2 14958 7.646 0.900 0.974 0.992 0.974 0.948 0.934 0.980 0.944 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
14. F33H2.5 pole-1 3734 7.646 0.942 0.962 0.962 0.962 0.947 0.963 0.975 0.933 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
15. C05C8.6 hpo-9 8263 7.645 0.922 0.979 0.981 0.979 0.934 0.936 0.975 0.939
16. Y17G7B.5 mcm-2 6246 7.645 0.939 0.959 0.981 0.959 0.962 0.990 0.941 0.914 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
17. F18C5.2 wrn-1 3792 7.645 0.918 0.989 0.975 0.989 0.966 0.954 0.952 0.902 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
18. K12D12.2 npp-3 6914 7.639 0.930 0.976 0.975 0.976 0.919 0.971 0.946 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
19. T23B5.1 prmt-3 10677 7.639 0.918 0.965 0.988 0.965 0.975 0.980 0.958 0.890 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
20. ZK973.2 cec-10 7108 7.638 0.922 0.977 0.942 0.977 0.950 0.967 0.948 0.955 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
21. T23H2.1 npp-12 12425 7.638 0.929 0.968 0.974 0.968 0.962 0.964 0.956 0.917 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
22. K02F2.3 teg-4 3873 7.633 0.971 0.979 0.982 0.979 0.932 0.967 0.933 0.890 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
23. Y38A8.3 ulp-2 7403 7.631 0.947 0.961 0.964 0.961 0.959 0.951 0.965 0.923 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
24. B0035.3 B0035.3 4118 7.627 0.918 0.972 0.985 0.972 0.940 0.947 0.945 0.948
25. Y56A3A.17 npp-16 5391 7.621 0.908 0.957 0.977 0.957 0.973 0.978 0.937 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
26. T05E8.3 let-355 8169 7.62 0.901 0.972 0.972 0.972 0.966 0.958 0.948 0.931
27. R05D3.11 met-2 3364 7.62 0.929 0.965 0.964 0.965 0.947 0.956 0.957 0.937 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
28. ZK742.1 xpo-1 20741 7.616 0.932 0.967 0.969 0.967 0.969 0.952 0.937 0.923 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
29. E01A2.4 let-504 9788 7.615 0.917 0.970 0.937 0.970 0.966 0.948 0.958 0.949
30. F32H2.1 snpc-4 7581 7.613 0.911 0.975 0.961 0.975 0.967 0.970 0.944 0.910 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
31. F45E12.2 brf-1 4667 7.61 0.938 0.980 0.984 0.980 0.966 0.940 0.887 0.935 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
32. W03G1.6 pig-1 5015 7.61 0.913 0.961 0.983 0.961 0.948 0.969 0.970 0.905 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
33. F36A2.1 cids-2 4551 7.609 0.901 0.964 0.954 0.964 0.957 0.973 0.954 0.942 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
34. Y37D8A.9 mrg-1 14369 7.604 0.917 0.978 0.981 0.978 0.963 0.965 0.935 0.887 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
35. F43G9.9 cpn-1 14505 7.604 0.879 0.963 0.985 0.963 0.924 0.974 0.962 0.954 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
36. B0464.9 B0464.9 2997 7.604 0.936 0.970 0.947 0.970 0.910 0.983 0.958 0.930 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
37. B0464.2 ctr-9 7610 7.603 0.878 0.973 0.958 0.973 0.963 0.983 0.926 0.949 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
38. K06A5.7 cdc-25.1 14961 7.602 0.924 0.937 0.974 0.937 0.977 0.980 0.933 0.940 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
39. F28H1.3 aars-2 13537 7.6 0.903 0.966 0.968 0.966 0.962 0.950 0.939 0.946 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
40. Y113G7A.8 fre-1 1485 7.599 0.933 0.954 0.931 0.954 0.977 0.980 0.955 0.915 NADPH-dependent diflavin oxidoreductase 1 [Source:RefSeq peptide;Acc:NP_507875]
41. W02B12.3 rsp-1 9235 7.598 0.910 0.954 0.975 0.954 0.954 0.979 0.950 0.922 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
42. R12C12.2 ran-5 14517 7.597 0.904 0.968 0.972 0.968 0.949 0.949 0.956 0.931 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
43. T12E12.2 cec-6 4758 7.596 0.879 0.977 0.965 0.977 0.934 0.974 0.938 0.952 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
44. Y37E3.15 npp-13 7250 7.595 0.918 0.962 0.935 0.962 0.963 0.975 0.966 0.914 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
45. C28H8.9 dpff-1 8684 7.594 0.910 0.975 0.976 0.975 0.933 0.962 0.948 0.915 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
46. ZK507.6 cya-1 6807 7.594 0.909 0.959 0.975 0.959 0.895 0.978 0.981 0.938 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
47. C08B11.3 swsn-7 11608 7.593 0.951 0.973 0.986 0.973 0.937 0.940 0.932 0.901 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
48. Y18D10A.1 attf-6 6942 7.592 0.889 0.968 0.963 0.968 0.958 0.956 0.929 0.961 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
49. Y37A1B.1 lst-3 10739 7.592 0.909 0.977 0.958 0.977 0.946 0.939 0.936 0.950 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
50. F33D4.5 mrpl-1 5337 7.592 0.888 0.972 0.955 0.972 0.961 0.962 0.959 0.923 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
51. Y32F6A.1 set-22 2474 7.591 0.920 0.970 0.959 0.970 0.937 0.935 0.965 0.935 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
52. F32D1.10 mcm-7 21233 7.59 0.891 0.966 0.977 0.966 0.955 0.966 0.951 0.918 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
53. C18G1.5 hil-4 21692 7.59 0.912 0.962 0.974 0.962 0.957 0.970 0.947 0.906 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
54. K01G5.4 ran-1 32379 7.588 0.923 0.970 0.958 0.970 0.959 0.981 0.924 0.903 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
55. ZK328.2 eftu-2 7040 7.588 0.891 0.973 0.963 0.973 0.956 0.967 0.957 0.908 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
56. W02D9.1 pri-2 6048 7.588 0.895 0.970 0.963 0.970 0.967 0.965 0.951 0.907 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
57. F25B5.2 nop-1 4127 7.587 0.920 0.958 0.979 0.958 0.952 0.960 0.935 0.925 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
58. T13F2.7 sna-2 4771 7.586 0.913 0.970 0.957 0.970 0.934 0.938 0.944 0.960 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
59. Y41D4B.19 npp-8 12992 7.585 0.944 0.974 0.982 0.974 0.946 0.920 0.921 0.924 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
60. F49D11.1 prp-17 5338 7.585 0.915 0.981 0.973 0.981 0.933 0.955 0.938 0.909 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
61. F28C6.6 suf-1 3642 7.585 0.908 0.960 0.943 0.960 0.962 0.956 0.969 0.927 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
62. Y54E2A.3 tac-1 6308 7.583 0.915 0.945 0.962 0.945 0.957 0.958 0.969 0.932 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
63. Y38E10A.6 ceh-100 5505 7.582 0.899 0.972 0.964 0.972 0.975 0.965 0.908 0.927 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
64. C33H5.15 sgo-1 3674 7.582 0.896 0.961 0.982 0.961 0.971 0.902 0.969 0.940 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
65. F28B3.7 him-1 18274 7.582 0.919 0.972 0.972 0.972 0.943 0.950 0.940 0.914 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
66. T05H4.14 gad-1 7979 7.58 0.917 0.970 0.988 0.970 0.953 0.932 0.943 0.907 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
67. F59E12.2 zyg-1 1718 7.58 0.921 0.973 0.953 0.973 0.909 0.959 0.952 0.940 Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
68. K02F2.4 ulp-5 3433 7.579 0.900 0.948 0.980 0.948 0.931 0.975 0.957 0.940 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
69. C02B10.5 C02B10.5 9171 7.579 0.901 0.943 0.992 0.943 0.959 0.946 0.963 0.932
70. C26E6.4 rpb-2 7053 7.577 0.908 0.967 0.942 0.967 0.969 0.968 0.968 0.888 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
71. F30F8.3 gras-1 5902 7.576 0.916 0.975 0.967 0.975 0.953 0.917 0.959 0.914 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
72. W08D2.7 mtr-4 2699 7.575 0.939 0.936 0.978 0.936 0.948 0.986 0.922 0.930 mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
73. F55G1.8 plk-3 12036 7.573 0.949 0.973 0.975 0.973 0.960 0.925 0.931 0.887 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
74. F53F10.5 npp-11 3378 7.573 0.933 0.973 0.958 0.973 0.939 0.937 0.949 0.911 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
75. F46B6.3 smg-4 4959 7.571 0.910 0.963 0.956 0.963 0.918 0.968 0.935 0.958 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
76. T05F1.6 hsr-9 13312 7.57 0.929 0.984 0.978 0.984 0.927 0.918 0.908 0.942
77. C17E4.10 C17E4.10 7034 7.569 0.931 0.963 0.980 0.963 0.910 0.956 0.960 0.906
78. C04H5.6 mog-4 4517 7.569 0.931 0.958 0.949 0.958 0.977 0.949 0.925 0.922 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
79. C52E4.6 cyl-1 6405 7.568 0.886 0.973 0.967 0.973 0.933 0.957 0.974 0.905 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
80. Y37H2A.5 fbxa-210 2230 7.568 0.918 0.939 0.980 0.939 0.948 0.964 0.961 0.919 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
81. F32H2.4 thoc-3 3861 7.567 0.924 0.959 0.966 0.959 0.939 0.927 0.972 0.921 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
82. F10C2.2 kup-1 3852 7.567 0.933 0.971 0.973 0.971 0.935 0.930 0.959 0.895
83. C08B11.5 sap-49 10553 7.565 0.863 0.980 0.946 0.980 0.953 0.958 0.965 0.920 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
84. Y54H5A.3 tag-262 4269 7.562 0.883 0.974 0.978 0.974 0.935 0.954 0.940 0.924
85. F25B3.6 rtfo-1 11965 7.561 0.927 0.977 0.982 0.977 0.939 0.932 0.952 0.875 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
86. F58F6.4 rfc-2 2074 7.56 0.894 0.951 0.948 0.951 0.968 0.980 0.953 0.915 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
87. T10F2.4 prp-19 11298 7.559 0.878 0.973 0.956 0.973 0.941 0.969 0.956 0.913 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
88. F32E10.6 cec-5 10643 7.557 0.915 0.959 0.977 0.959 0.958 0.959 0.939 0.891 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
89. W02F12.6 sna-1 7338 7.557 0.913 0.965 0.957 0.965 0.953 0.954 0.973 0.877 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
90. F10E9.8 sas-4 3703 7.557 0.914 0.940 0.970 0.940 0.955 0.970 0.955 0.913 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
91. C10C5.6 daf-15 8724 7.555 0.945 0.955 0.972 0.955 0.947 0.969 0.934 0.878 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
92. K03H1.2 mog-1 4057 7.555 0.920 0.984 0.973 0.984 0.951 0.941 0.928 0.874 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
93. Y43C5A.5 thk-1 2504 7.555 0.966 0.958 0.952 0.958 0.935 0.970 0.910 0.906 Thymidine kinase [Source:RefSeq peptide;Acc:NP_001255477]
94. C48B4.11 C48B4.11 4384 7.554 0.893 0.974 0.965 0.974 0.972 0.983 0.930 0.863
95. Y47G6A.8 crn-1 3494 7.554 0.914 0.955 0.965 0.955 0.930 0.945 0.963 0.927 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
96. Y116A8C.42 snr-1 17062 7.553 0.854 0.978 0.954 0.978 0.963 0.979 0.924 0.923 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
97. T07D4.3 rha-1 5898 7.552 0.889 0.970 0.950 0.970 0.927 0.950 0.938 0.958 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
98. F58E10.3 ddx-17 15107 7.552 0.905 0.979 0.970 0.979 0.958 0.931 0.912 0.918 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
99. T28D9.2 rsp-5 6460 7.552 0.885 0.962 0.966 0.962 0.960 0.925 0.953 0.939 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
100. F09E8.3 msh-5 2136 7.552 0.893 0.943 0.949 0.943 0.931 0.954 0.966 0.973 MutS protein homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q19272]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA